Search results for "Breeding"

showing 10 items of 475 documents

Comparative selection signature analyses identify genomic footprints in Reggiana cattle, the traditional breed of the Parmigiano-Reggiano cheese prod…

2020

Reggiana is an autochthonous cattle breed reared mainly in the province of Reggio Emilia, located in the North of Italy. Reggiana cattle (originally a triple-purpose population largely diffused in the North of Italy) are characterised by a typical solid red coat colour. About 2500 cows of this breed are currently registered to its herd book. Reggiana is now considered a dual-purpose breed even if it is almost completely dedicated to the production of a mono-breed branded Protected Designation of Origin Parmigiano-Reggiano cheese, which is the main driver of the sustainable conservation of this local genetic resource. In this study, we provided the first overview of genomic footprints that c…

MaleCoat040301 veterinary sciencesPopulationselection signatureBreedingQuantitative trait locusBiologyPolymorphism Single NucleotideSF1-1100Fixation index0403 veterinary scienceCheeseAnimalsBos taurueducationAllele frequencygenomeeducation.field_of_studyGenomeAutochthonous breedHaplotypeautochthonous breed Bos taurus genome selection signature selection sweep0402 animal and dairy scienceGenomics04 agricultural and veterinary sciencesSelection signature040201 dairy & animal scienceBreedBos taurusAnimal cultureselection sweepautochthonous breedItalyEvolutionary biologyHerdCattleFemaleAnimal Science and ZoologySelection sweepAnimal
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When should cuckolded males care for extra-pair offspring?

2012

In socially monogamous species with bi-parental care, males suffer reduced reproductive success if their mate engages in extra-pair copulations (EPCs). One might therefore expect that males should refuse to care for a brood if they can detect that an EPC has occurred. Here, we use a game-theory model to study male brood care in the face of EPCs in a cooperatively breeding species in which offspring help to raise their (half-) siblings in their parents' next breeding attempt. We show that under certain conditions males are selected to care even for broods completely unrelated to themselves. This counterintuitive result arises through a form of pseudo-reciprocity, whereby surviving extra-pair…

MaleGeneral Immunology and MicrobiologyReproductive successParentingOffspringGeneral MedicineBiologyModels BiologicalGeneral Biochemistry Genetics and Molecular BiologyBroodSexual Behavior AnimalCooperative breedingBrood careta1181AnimalsFemaleGenetic FitnessGeneral Agricultural and Biological SciencesPaternal careSocial psychologyResearch ArticlesGeneral Environmental ScienceDemographyProceedings. Biological sciences
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Heritability Estimates of Differences in Arbitrary Embryonic Mortality Traits in Turkeys

1971

Abstract INTRODUCTION SPECIFIC embryonic abnormalities in Broad Breasted Bronze turkeys which contributed to low hatchability were classified into eight groups which are referred to as traits in this paper. References to these traits or similar abnormalities in chickens and turkeys are shown in Table 1. The objective of this study was to determine the differences in the rates, relative to unhatched fertile eggs, at which these specific traits could be changed by artificial selection which was accompanied by inbreeding. Rapid changes would indicate the traits more responsive to selection. MATERIALS AND METHODS Four different strains of Broad Breasted Bronze turkeys were introduced as eggs to…

MaleGeneticsTurkeysmedia_common.quotation_subjectZoologyFertilityChick EmbryoGeneral MedicineHeritabilityBiologyBody weightCongenital AbnormalitiesFertilityAnimalsFemaleInbreedingAnimal Science and ZoologySelection GeneticInbreedingPoultry DiseasesSelection (genetic algorithm)media_commonPoultry Science
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Female-biased dispersal alone can reduce the occurrence of inbreeding in black grouse (Tetrao tetrix)

2010

Although inbreeding depression and mechanisms for kin recognition have been described in natural bird populations, inbreeding avoidance through mate choice has rarely been reported suggesting that sex-biased dispersal is the main mechanism reducing the risks of inbreeding. However, a full understanding of the effect of dispersal on the occurrence of inbred matings requires estimating the inbreeding risks prior to dispersal. Combining pairwise relatedness measures and kinship assignments, we investigated in black grouse whether the observed occurrence of inbred matings was explained by active kin discrimination or by female-biased dispersal. In this large continuous population, copulations b…

MaleGenotypeKin recognitionPopulationZoologyTetraoGeneticsInbreeding depressionAnimalsInbreeding avoidanceInbreedingGalliformeseducationEcology Evolution Behavior and SystematicsLikelihood Functionseducation.field_of_studyGeographyModels GeneticbiologyEcologySequence Analysis DNAMating Preference Animalbiology.organism_classificationGenetics PopulationMate choiceBiological dispersalFemaleInbreedingSoftwareMolecular Ecology
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Signatures of selection in the genome of Swedish warmblood horses selected for sport performance

2019

Abstract Background A growing demand for improved physical skills and mental attitude in modern sport horses has led to strong selection for performance in many warmblood studbooks. The aim of this study was to detect genomic regions with low diversity, and therefore potentially under selection, in Swedish Warmblood horses (SWB) by analysing high-density SNP data. To investigate if such signatures could be the result of selection for equestrian sport performance, we compared our SWB SNP data with those from Exmoor ponies, a horse breed not selected for sport performance traits. Results The genomic scan for homozygous regions identified long runs of homozygosity (ROH) shared by more than 85%…

MaleGenotyping TechniquesPerformanceDIVERSITYBreedingRuns of HomozygosityHorseGenomeHISTORYInbreedingHOMOZYGOSITYGenetics & Heredity0303 health sciencesSnp dataeducation.field_of_studyHomozygoteRUNSASSOCIATIONGenomics04 agricultural and veterinary sciencesBreedDIFFERENTIATIONWarmbloodFemaleLife Sciences & BiomedicineTRAITSResearch ArticleSportsBiotechnologyGENESlcsh:QH426-470lcsh:BiotechnologyPopulationBiologyRuns of homozygosityPolymorphism Single Nucleotide03 medical and health scienceslcsh:TP248.13-248.65GeneticsAnimalsHorsesFunctional studieseducationSelection (genetic algorithm)030304 developmental biologyScience & Technology0402 animal and dairy scienceSelection signature040201 dairy & animal sciencelcsh:GeneticsBiotechnology & Applied MicrobiologyEvolutionary biologyWIDE SCANHaplotype homozygosityBMC Genomics
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Evidence for an Association between Post-Fledging Dispersal and Microsatellite Multilocus Heterozygosity in a Large Population of Greater Flamingos

2013

10 pages; International audience; DISPERSAL CAN BE DIVIDED INTO THREE STAGES: departure, transience and settlement. Despite the fact that theoretical studies have emphasized the importance of heterozygosity on dispersal strategies, empirical evidence of its effect on different stages of dispersal is lacking. Here, using multi-event capture-mark-recapture models, we show a negative association between microsatellite multilocus heterozygosity (MLH; 10 loci; n = 1023) and post-fledging dispersal propensity for greater flamingos, Phoenicopterus roseus, born in southern France. We propose that the negative effects of inbreeding depression affects competitive ability and therefore more homozygous…

MaleHeterozygoteAnimal sexual behaviourPopulation Dynamicslcsh:MedicineBiologyLoss of heterozygosityBirdsInbreeding depressionAnimalslcsh:ScienceGenetics[ SDE.BE ] Environmental Sciences/Biodiversity and EcologyMultidisciplinaryGeographyNull modellcsh:RFledgeModels Theoretical[ SDV.GEN.GPO ] Life Sciences [q-bio]/Genetics/Populations and Evolution [q-bio.PE]Evolutionary biologyGenetic LociBiological dispersalMicrosatellitelcsh:QAnimal MigrationFemaleFranceSeasonsInbreedingAlgorithmsResearch ArticleMicrosatellite RepeatsPLoS ONE
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Inbreeding depression and male fitness in black grouse

2002

The male lifetime lekking performance was studied, and related to inbreeding-outbreeding in a wild population of black grouse (Tetrao tetrix) in central Finland between 1989 and 1995. Inbreeding was measured as the mean heterozygosity and mean d(2) of 15 microsatellite loci. We found a significantly positive relationship between mean d(2) and lifetime copulation success (LCS), while the relationship between heterozygosity and LCS was close to significant. We also found that males that never obtained a lek territory had significantly lower mean heterozygosity than males that were observed on a territory at least during one mating season in their life. Furthermore, among males that were succe…

MaleHeterozygotePopulationTetraoGeneral Biochemistry Genetics and Molecular BiologyBirdsLoss of heterozygosityLek matingInbreeding depressionSeasonal breederAnimalsInbreedingeducationGeneral Environmental Scienceeducation.field_of_studyGeneral Immunology and MicrobiologybiologyEcologyReproductionGeneral MedicineBlack grousebiology.organism_classificationGenetics PopulationGeneral Agricultural and Biological SciencesInbreedingMicrosatellite RepeatsResearch ArticleDemographyProceedings of the Royal Society of London. Series B: Biological Sciences
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The Demographic Costs of Sexually Antagonistic Selection in Partially Selfing Populations

2022

When selection differs between the sexes, genes expressed by both males and females can experience sexually antagonistic (SA) selection, where beneficial alleles for one sex are deleterious for the other. Classic population genetics theory has been fundamental to understanding how and when SA genetic variation can be maintained by balancing selection, but these models have rarely considered the demographic consequences of coexisting alleles with deleterious fitness effects in each sex. In this article, we develop a stage-structured Mendelian matrix model and jointly analyze the evolutionary and demographic consequences of SA selection in obligately outcrossing (i.e., dioecious/gonochorous) …

MaleInbreeding DepressionPolymorphism Geneticluonnonvalintasuvullinen lisääntyminenpolymorphismGenetics Populationevolutionary demographypartial selfingpopulaatiogenetiikkaintralocus sexual conflictkasvitsukusiitosHumanskaksineuvoisuusFemaleSelection Geneticsuvuton lisääntyminenAllelesDemographyinbreeding depressionMimulus guttatus
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Paternal signature in kin recognition cues of a social insect: concealed in juveniles, revealed in adults

2014

Kin recognition is a key mechanism to direct social behaviours towards related individuals or avoid inbreeding depression. In insects, recognition is generally mediated by cuticular hydrocarbon (CHC) compounds, which are partly inherited from parents. However, in social insects, potential nepotistic conflicts between group members from different patrilines are predicted to select against the expression of patriline-specific signatures in CHC profiles. Whereas this key prediction in the evolution of insect signalling received empirical support in eusocial insects, it remains unclear whether it can be generalized beyond eusociality to less-derived forms of social life. Here, we addressed this…

MaleInsectaTime FactorsKin recognition[SDV]Life Sciences [q-bio]General Biochemistry Genetics and Molecular BiologyForficula auriculariaAnimalsJuvenileInbreeding[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyAnimal communicationMaternal BehaviorSocial BehaviorResearch ArticlesComputingMilieux_MISCELLANEOUSGeneral Environmental Science[SDV.EE]Life Sciences [q-bio]/Ecology environment[SDV.NEU.PC]Life Sciences [q-bio]/Neurons and Cognition [q-bio.NC]/Psychology and behaviorGeneral Immunology and MicrobiologybiologyEcologyReproductionGeneral Medicine16. Peace & justicebiology.organism_classificationEusocialityHydrocarbonsFamily lifeAnimal CommunicationEvolutionary biologyEarwigFemaleCues[SDE.BE]Environmental Sciences/Biodiversity and EcologyGeneral Agricultural and Biological SciencesPaternal care[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/SymbiosisProceedings of the Royal Society B: Biological Sciences
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Comparison of casein haplotypes between two geographically distant European dairy goat breeds.

2008

The aim of this paper was to characterize the diversity among haplotypes based on 22 single nucleotide polymorphisms (SNPs) and one deletion within four casein genes in two geographically distant goat populations, the Sicilian Girgentana breed and the Norwegian goat breed. Forty Girgentana goats were genotyped for the aforementioned polymorphisms and the resulting data set was compared with 436 goats from the Norwegian population previously genotyped for these markers. Several casein gene polymorphisms were not in Hardy-Weinberg equilibrium either in Girgentana, or in the Norwegian breed. The SNP haplotype frequencies for the four casein genes were calculated and despite the large geographi…

MaleLinkage disequilibriumPopulationSingle-nucleotide polymorphismNorwegianBiologyBreedingPolymorphism Single NucleotideLinkage DisequilibriumFood AnimalsGene FrequencySpecies SpecificityPolymorphism (computer science)AnimalseducationAllele frequencySequence DeletionGeneticseducation.field_of_studyGoatsHaplotypeCaseinsGeneral MedicineBreedlanguage.human_languageEuropeHaplotypeslanguageAnimal Science and ZoologyFemaleJournal of animal breeding and genetics = Zeitschrift fur Tierzuchtung und Zuchtungsbiologie
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