Search results for "CALL"

showing 10 items of 2320 documents

Assessment of computational methods for the analysis of single-cell ATAC-seq data

2019

Abstract Background Recent innovations in single-cell Assay for Transposase Accessible Chromatin using sequencing (scATAC-seq) enable profiling of the epigenetic landscape of thousands of individual cells. scATAC-seq data analysis presents unique methodological challenges. scATAC-seq experiments sample DNA, which, due to low copy numbers (diploid in humans), lead to inherent data sparsity (1–10% of peaks detected per cell) compared to transcriptomic (scRNA-seq) data (10–45% of expressed genes detected per cell). Such challenges in data generation emphasize the need for informative features to assess cell heterogeneity at the chromatin level. Results We present a benchmarking framework that …

Epigenomicslcsh:QH426-470Test data generationComputer scienceCellATAC-seqComputational biologyBiologyClusteringTranscriptomeMice03 medical and health scienceschemistry.chemical_compound0302 clinical medicinemedicineAnimalsHumansProfiling (information science)scATAC-seqnatural sciencesEpigeneticsFeature matrixCluster analysislcsh:QH301-705.5GeneTransposaseVisualization030304 developmental biologySparse matrix0303 health sciencesFeaturizationDimensionality reductionResearchComputational BiologySequence Analysis DNADimensionality reductionChromatinBenchmarkinglcsh:Geneticsmedicine.anatomical_structurelcsh:Biology (General)chemistryRegulatory genomicsSingle-Cell AnalysisPeak calling030217 neurology & neurosurgeryDNA
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Level of acceptance of epistemically unwarranted beliefs in pre-service primary school teachers: influence of cognitive style, academic level and gen…

2022

One of the main objectives of scientific literacy is the development of rational skills and critical thinking in citizens. This is a central goal for teachers. However, beliefs that lack rational foundation and supporting evidence, named “epistemically unwarranted beliefs” (EUB), spread rapidly among the population. If teachers had some of these EUB, their work could be compromised. The aim of this research was to determine the level of acceptance of different EUB in Spanish pre-service primary school teachers and to analyze the influence of their cognitive style, gender, and academic level. Two hundred and fifty undergraduate students of Bachelor’s Degree in Primary Education participated …

EpistemicallyCognitiveComunicació en les ciències socialsGenderEducació primàriaEnsenyament universitariAcademic LevelSchool Teachers
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TGF-beta regulates airway responses via T cells.

2003

Abstract Allergic asthma is characterized by airway hyperreactivity, inflammation, and a Th2-type cytokine profile favoring IgE production. Beneficial effects of TGF-β and conflicting results regarding the role of Th1 cytokines have been reported from murine asthma models. In this study, we examined the T cell as a target cell of TGF-β-mediated immune regulation in a mouse model of asthma. We demonstrate that impairment of TGF-β signaling in T cells of transgenic mice expressing a dominant-negative TGF-β type II receptor leads to a decrease in airway reactivity in a non-Ag-dependent model. Increased serum levels of IFN-γ can be detected in these animals. In contrast, after injection of OVA …

Epitopes T-LymphocyteNitric Oxide Synthase Type IIImmunoglobulin EMiceAntibody SpecificityCell MovementT-Lymphocyte SubsetsTransforming Growth Factor betaImmunology and AllergyInterferon gammaLungInterleukin-13biologymedicine.diagnostic_testrespiratory systemImmunohistochemistrymedicine.anatomical_structureInterleukin 13Alum Compoundsmedicine.symptomBronchial HyperreactivityBronchoalveolar Lavage Fluidmedicine.drugGenetically modified mousemedicine.medical_specialtyOvalbuminT cellImmunologyCD2 AntigensInflammationMice Inbred StrainsMice TransgenicProtein Serine-Threonine KinasesInterferon-gammaInternal medicineAdministration InhalationmedicineAnimalsHumansAerosolsInflammationbusiness.industryReceptor Transforming Growth Factor-beta Type IITransforming growth factor betaImmunoglobulin ETh1 Cellsrespiratory tract diseasesEndocrinologyBronchoalveolar lavageImmunologybiology.proteinNitric Oxide SynthasebusinessReceptors Transforming Growth Factor betaJournal of immunology (Baltimore, Md. : 1950)
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Ernest Callot (1840-1912), trésorier du CIO, poète rochelais et helléniste

2016

International audience

Ernest Callot[ SHS.HIST ] Humanities and Social Sciences/History[SHS.HIST] Humanities and Social Sciences/History[SHS.HIST]Humanities and Social Sciences/HistoryComputingMilieux_MISCELLANEOUS
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Insecticidal Genetically Modified Crops and Insect Resistance Management (IRM)

2008

Economically important crops, such as maize and cotton, have been transformed with genes encoding insecticidal proteins from Bacillus thuringiensis (Bt) to confer them protection against the most important insect pests. Of the 114 million hectares globally planted with GM crops in 2007, over one third are insect-resistant Bt crops, and the area keeps increasing every year. The potential for insects to evolve resistance to GM insecticidal plants is considered to be one of the main threats to this technology, since resistance to Bt sprayable products has been demonstrated. Insect resistance management plans for this new class of pesticides are encouraged and became mandatory in the USA. Of th…

European corn borerDiamondback mothbiologyResistance (ecology)business.industryfungifood and beveragesGenetically modified cropsPesticidebiology.organism_classificationBiotechnologyCropAgronomyBt cottonBacillus thuringiensisbusiness
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Le necessarie tutele (e i relativi controlli) in ordine al processo di formazione della volontà di morte

2023

The article examines the legislative proposal on medically assisted death by the working group 'Per un diritto gentile', reviewing its contents through the lens of ECHR case law and the Spanish Ley Orgánica de regulación de la eutanasía. The comparative analysis sheds light on the need for additional safeguards to protect patients' autonomy and ensure that medical professionals comply with their informed, free from any pressure or abuse will.

Euthanasia medically assisted death patients' autonomySettore IUS/02 - Diritto Privato Comparato
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Backwards Martingales and Exchangeability

2020

With many data acquisitions, such as telephone surveys, the order in which the data come does not matter. Mathematically, we say that a family of random variables is exchangeable if the joint distribution does not change under finite permutations. De Finetti’s structural theorem says that an infinite family of E-valued exchangeable random variables can be described by a two-stage experiment. At the first stage, a probability distribution Ξ on E is drawn at random. At the second stage, independent and identically distributed random variables with distribution Ξ are implemented.

Exchangeable random variablesDiscrete mathematicsIndependent and identically distributed random variablesDistribution (number theory)Conditional independenceJoint probability distributionProbability distributionConditional probability distributionRandom variableMathematics
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On thermoeconomics of energy systems at variable load conditions: integrated optimization of plant design and operation

2007

Abstract Thermoeconomics has been assuming a growing role among the disciplines oriented to the analysis of energy systems, its different methodologies allowing solution of problems in the fields of cost accounting, plant design optimisation and diagnostic of malfunctions. However, the thermoeconomic methodologies as such are particularly appropriate to analyse large industrial systems at steady or quasi-steady operation, but they can be hardly applied to small to medium scale units operating in unsteady conditions to cover a variable energy demand. In this paper, the fundamentals of thermoeconomics for systems operated at variable load are discussed, examining the cost formation process an…

ExergyEngineeringPrimary energyRenewable Energy Sustainability and the Environmentbusiness.industryThermoeconomics has been assuming a growing role among the disciplines oriented to the analysis of energy systems its different methodologies allowing solution of problems in the fields of cost accounting plant design optimisation and diagnostic of malfunctions. However the thermoeconomic methodologies as such are particularly appropriate to analyse large industrial systems at steady or quasisteady operation but they can be hardly applied to small to medium scale units operating in unsteady conditions to cover a variable energy demand. In this paper the fundamentals of thermoeconomics for systems operated at variable load are discussed examining the cost formation process and separately the cost fractions related to capital depreciation (which require additional distinctions with respect to plants in steady operation) and to exergy consumption. The relevant effects of the efficiency penalty due to off design operation on the exergetic cost of internal flows are also examined. An original algorithm is proposed for the integrated optimization of plant design and operation based on an analytical solution by the Lagrange multipliers method and on a multi-objective decision function expressed either in terms of net cash flow or primary energy saving. The method is suitable for application in complex energy systems such as ‘‘facilities of components of a same product’’ connected to external networks for power or heat distribution. For demonstrative purposes the proposed thermoeconomically aided optimization is performed for a grid connected trigeneration system to be installed in a large hotel.Energy Engineering and Power TechnologyCost accountingThermoeconomicsGridEnergy conservationVariable (computer science)symbols.namesakeFuel TechnologyNuclear Energy and EngineeringLagrange multipliersymbolsProcess engineeringbusinessSimulation
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A characterization of the n-ary many-sorted closure operators and a many-sorted Tarski irredundant basis theorem

2018

A theorem of single-sorted algebra states that, for a closure space (A, J ) and a natural number n, the closure operator J on the set A is n-ary if and only if there exists a single-sorted signature Σ and a Σ-algebra A such that every operation of A is of an arity ≤ n and J = SgA, where SgA is the subalgebra generating operator on A determined by A. On the other hand, a theorem of Tarski asserts that if J is an n-ary closure operator on a set A with n ≥ 2, then, for every i, j ∈ IrB(A, J ), where IrB(A, J ) is the set of all natural numbers which have the property of being the cardinality of an irredundant basis (≡ minimal generating set) of A with respect to J , if i < j and {i + 1, . . . …

Existential quantificationClosure (topology)Natural numberCharacterization (mathematics)Space (mathematics)CombinatoricsSet (abstract data type)TheoryofComputation_MATHEMATICALLOGICANDFORMALLANGUAGESMathematics (miscellaneous)If and only ifData_FILESClosure operatorMatemàticaMathematicsQuaestiones Mathematicae
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Life history, environment and extinction of the Scallop Carolinapecten Eboreus (Conrad) in the Plio-Pleistocene of the U.S. Eastern Seaboard

2019

Plio-Pleistocene mass extinction of marine bivalves on the U.S. eastern seaboard has been attributed to declines in temperature and primary production. We investigate the relationship of growth rate in the scallop Carolinapecten eboreus to variation in these parameters to determine which contributed to its extinction. We use ontogenetic profiles of shell δ18O to estimate growth rate and seasonal temperature, microgrowth-increment data to validate δ18O-based figures for growth rate, and shell δ13C to supplement assemblage evidence of production. Postlarval growth started in the spring/summer in individuals from the Middle Atlantic Coastal Plain but in the autumn/ winter in some from the Gulf…

Extinction event010506 paleontologygeographygeography.geographical_feature_categoryExtinctionδ13CCoastal plainEcologyPaleontologyPlio-PleistoceneBiology010502 geochemistry & geophysics01 natural sciencesPredationScallopGrowth rateEcology Evolution Behavior and Systematics0105 earth and related environmental sciences
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