Search results for "CLU"

showing 10 items of 14395 documents

Molecular Phylogeny of Tintinnid Ciliates (Tintinnida, Ciliophora)

2012

We investigated the phylogeny of tintinnids (Ciliophora, Tintinnida) with 62 new SSU-rDNA sequences from single cells of 32 marine and freshwater species in 20 genera, including the first SSU-rDNA sequences for Amphorides, Climacocylis, Codonaria, Cyttarocylis, Parundella, Petalotricha, Undella and Xystonella, and 23 ITS sequences of 17 species in 15 genera. SSU-rDNA phylogenies suggested a basal position for Eutintinnus, distant to other Tintinnidae. We propose Eutintinnidae fam. nov. for this divergent genus, keeping the family Tintinnidae for Amphorellopsis, Amphorides and Steenstrupiella. Tintinnopsis species branched in at least two separate groups and, unexpectedly, Climacocylis branc…

0106 biological sciencesSequence analysisMolecular Sequence DataZoologyBiology010603 evolutionary biology01 natural sciencesMicrobiologyDNA Ribosomal03 medical and health sciencesPhylogeneticsGenusDNA Ribosomal SpacerRNA Ribosomal 18SCluster Analysis14. Life underwaterCiliophoraCladeSensu strictoPhylogeny[SDU.STU.OC]Sciences of the Universe [physics]/Earth Sciences/Oceanography030304 developmental biology0303 health sciencesEcologyWaterGenes rRNASequence Analysis DNARibosomal RNADNA Protozoanbiology.organism_classificationMolecular phylogeneticsRNA ProtozoanTintinnid
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Updated checklist and distribution of large branchiopods (Branchiopoda: Anostraca, Notostraca, Spinicaudata) in Tunisia

2016

Temporary ponds are the most peculiar and representative water bodies in the arid and semi-arid regions of the world, where they often represent diversity hotspots that greatly contribute to the regional biodiversity. Being indissolubly linked to these ecosystems, the so-called “large branchiopods” are unanimously considered flagship taxa of these habitats. Nonetheless, updated and detailed information on large branchiopod faunas is still missing in many countries or regions. Based on an extensive bibliographical review and field samplings, we provide an updated and commented checklist of large branchiopods in Tunisia, one of the less investigated countries of the Maghreb as far as inland w…

0106 biological sciencesSettore BIO/07 - EcologiaBranchinectella mediafauna of Maghreblcsh:QH1-199.5FaunaMediterranean temporary pondsBranchinectella media fauna of Maghreb freshwater crustaceans Mediterranean temporary ponds regional biodiversityBiodiversitySettore BIO/05 - ZoologiaBranchiopodaBiologylcsh:General. Including nature conservation geographical distribution010603 evolutionary biology01 natural sciencesNotostracaregional biodiversityEcology Evolution Behavior and SystematicsGlobal and Planetary ChangeEcologyEcology010604 marine biology & hydrobiologybiology.organism_classificationTaxonHabitatAnostracaSpecies richnessfreshwater crustaceans
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Distribution of sea urchins living near shallow water CO2 vents is dependent upon species acid-base and ion-regulatory abilities.

2013

To reduce the negative effect of climate change on Biodiversity, the use of geological CO2 sequestration has been proposed; however leakage from underwater storages may represent a risk to marine life. As extracellular homeostasis is important in determining species' ability to cope with elevated CO2, we investigated the acid-base and ion regulatory responses, as well as the density, of sea urchins living around CO2 vents at Vulcano, Italy. We conducted in situ transplantation and field-based laboratory exposures to different pCO2/pH regimes. Our results confirm that sea urchins have some ability to regulate their extracellular fluid under elevated pCO2. Furthermore, we show that even in cl…

0106 biological sciencesSettore BIO/07 - EcologiaGeological Phenomena010504 meteorology & atmospheric sciencesClimate ChangeSpecies distributionBiodiversityMarine lifeAquatic ScienceOceanography01 natural sciencesParacentrotus lividushowever leakage from underwater storages may represent a risk to marine life. As extracellular homeostasis is important in determining species' ability to cope with elevated CO2 we investigated the acid-base and ion regulatory responses as well as the density of sea urchins living around CO2 vents at Vulcano Italy. We conducted in situ transplantation and field-based laboratory exposures to different pCO2/pH regimes. Our results confirm that sea urchins have some ability to regulate their extracellular fluid under elevated pCO2. Furthermore we show that even in closely-related taxa divergent physiological capabilities underlie differences in taxa distribution around the CO2 vent. It is concluded that species distribution under the sort of elevated CO2 conditions occurring with leakages from geological storages and future ocean acidification scenarios may partly be determined by quite subtle physiological differentiation.Mediterranean seaBenthosAnimalsSeawater14. Life underwaterEcosystem0105 earth and related environmental sciencesbiologyEcology010604 marine biology & hydrobiologyTo reduce the negative effect of climate change on Biodiversity the use of geological CO2 sequestration has been proposedOcean acidificationCarbon DioxideHydrogen-Ion Concentrationbiology.organism_classificationAdaptation PhysiologicalPollutionTransplantationOceanographyItaly13. Climate actionSea UrchinsWater Pollutants Chemical
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Escaping the evolutionary trap: Can size-related contest advantage compensate for juvenile mortality disadvantage when parasitoids develop in unnatur…

2021

Abstract The quality of hosts for a parasitoid wasp may be influenced by attributes such as host size or species, with high quality for successful development usually coincident with high quality for larger offspring. This is not always the case: for the Scelionid wasp Trissolcus basalis, oviposition in eggs of the Brown Marmorated Stink Bug, Halyomorpha halys, rather than of the normal host, the Southern Green Stink Bug, Nezara viridula, leads to lower offspring survival, but survivors can be unusually large. Adult female T. basalis engage in contests for host access. As larger contestants are typically favoured in contests between parasitoids, the larger size of surviving offspring may co…

0106 biological sciencesStatistics and ProbabilityAvian clutch sizeHost specieGreen stink bugWaspsZoology010603 evolutionary biology01 natural sciencesReproductive valueGeneral Biochemistry Genetics and Molecular BiologyParasitoid waspHeteropteraAnimalsBrown marmorated stink bugEvolutionarily stable strategyGeneral Immunology and MicrobiologybiologySize advantageHost (biology)AnimalApplied MathematicsReproductionfungiGeneral MedicineTrissolcus basalibiology.organism_classificationBiological EvolutionEurope010602 entomologyHalyomorpha halyEvolutionary trapNezara viridulaModeling and SimulationOwnership advantageBrown Marmorated Stink BugFemaleReproductive valueGeneral Agricultural and Biological SciencesJournal of theoretical biology
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Genome Sequencing and Transcriptome Analysis Reveal Recent Species-Specific Gene Duplications in the Plastic Gilthead Sea Bream (Sparus aurata)

2019

Gilthead sea bream is an economically important fish species that is remarkably well-adapted to farming and changing environments. Understanding the genomic basis of this plasticity will serve to orientate domestication and selective breeding toward more robust and efficient fish. To address this goal, a draft genome assembly was reconstructed combining short- and long-read high-throughput sequencing with genetic linkage maps. The assembled unmasked genome spans 1.24 Gb of an expected 1.59 Gb genome size with 932 scaffolds (~732 Mb) anchored to 24 chromosomes that are available as a karyotype browser at www.nutrigroup-iats.org/seabreamdb. Homology-based functional annotation, supported by R…

0106 biological sciencesTransposable element010504 meteorology & atmospheric scienceslcsh:QH1-199.5Adaptive plasticitytransposon mobilizationOcean EngineeringRetrotransposonAquatic ScienceBiologylcsh:General. Including nature conservation geographical distributionOceanography01 natural sciencesGenomeimmune responsegilthead sea breamGene family14. Life underwaterresponse to stimuluslcsh:ScienceGeneGenome size0105 earth and related environmental sciencesWater Science and TechnologySyntenyGlobal and Planetary Changegene duplications010604 marine biology & hydrobiologyphylogenomicsEvolutionary biologylcsh:QMobilomeFrontiers in Marine Science
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Global endemics-area relationships of vascular plants

2019

Endemics–Area Relationships (EARs)are fundamental in theoretical and applied biogeography for understanding distribution patterns and promoting biodiversity conservation. However, calculating EARs for vascular plant species from existing data is problematic because of biased knowledge of endemic species distributions and differences between taxonomies. We aimed to overcome these challenges by developing a new standardized global dataset based on expert knowledge to produce a set of global EARs. We developed a nested circle design, with grain sizes of 10 4 , 10 5 , 10 6 , 10 7 , and 10 8 km 2 , respectively, and a global distribution of plots based on a stratified random scheme. The number …

0106 biological sciencesVascular plantZero-endemic plotslcsh:QH1-199.5Range (biology)Biogeographylcsh:General. Including nature conservation geographical distributionManagement Monitoring Policy and Law010603 evolutionary biology01 natural sciencesMinimum and maximum estimatelcsh:QH540-549.5StatisticsEndemismZero-endemic plotNature and Landscape ConservationEstimationbiologyEcology010604 marine biology & hydrobiologySampling (statistics)Minimum and maximum estimatesbiology.organism_classificationGeographyGlobal referenceExpert knowledgelcsh:EcologySpecies richnessScale (map)Distribution of land and sea
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Impact of Freshwater Inflow From the Volturno River on Coastal Circulation

2020

The coastal area located in front of the Volturno river's estuary (Gulf of Gaeta, central-eastern Tyrrhenian Sea) has been synoptically sampled during seven surveys, between June 2012 and October 2014. The vertical profiles of temperature and salinity have been acquired on a high resolution nearly-regular grid, in order to describe the spatial and temporal variability of the water masses characteristics. Moreover, to provide a first assessment of the steady circulation at small scale, the three-dimensional velocity field associated to each survey has been obtained through the full momentum equations of the Princeton Ocean Model. The data analysis has shown the entire water column characteri…

0106 biological sciencesWater massFreshwater inflowlcsh:QH1-199.5010504 meteorology & atmospheric sciencesWater masses characterizationTemperature salinity diagramsStratification (water)hydrologyOcean EngineeringOcean numerical simulationOcean numerical modellcsh:General. Including nature conservation geographical distributionAquatic ScienceOceanography01 natural sciencesTyrrhenia seaWater columnlcsh:Science0105 earth and related environmental sciencesWater Science and TechnologyGlobal and Planetary Change010604 marine biology & hydrobiologySettore GEO/01 - Paleontologia E Paleoecologiaeastern Tyrrhenian SeaPrinceton Ocean Modelcoastal circulation eastern Tyrrhenian Sea hydrology ocean numerical model water massesLongshore driftOceanographyOcean numerical model; eastern Tyrrhenian Sea; coastal circulation; water masses; hydrologycoastal circulationlcsh:QThermohaline circulationwater massesGeologyHydrology - HydrologieFrontiers in Marine Science
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Influence of Riverine Input on Norwegian Coastal Systems

2020

Coastal ecosystems are of high ecological and socioeconomic importance and are strongly influenced by processes from land, sea, and human activities. In this study, we present physical, chemical, and biological observations over two consecutive years from three study regions along the Norwegian coast that represent a broad latitudinal gradient in catchment and oceanographic conditions (∼59–69°N): outer Oslofjord/southern Norway, Runde/western Norway, and Malangen/northern Norway. The observations included river monitoring, coastal monitoring, and sensor-equipped ships of opportunity (“FerryBox”). The riverine discharge and transports were an order of magnitude higher, and the spatiotemporal…

0106 biological sciencesWater masschromophoric DOC (cDOM)010504 meteorology & atmospheric scienceslcsh:QH1-199.5Drainage basinOcean Engineeringdissolved organic carbon (DOC)Aquatic Sciencelcsh:General. Including nature conservation geographical distributionOceanography01 natural sciencesAlgal bloomriverine run-offcoastal systemsDissolved organic carbonEcosystem14. Life underwaterlcsh:ScienceVDP::Landbruks- og Fiskerifag: 900::Fiskerifag: 9200105 earth and related environmental sciencesWater Science and TechnologyGlobal and Planetary Changegeographygeography.geographical_feature_category010604 marine biology & hydrobiology15. Life on landSpring bloomColored dissolved organic matterOceanographycoastal darkening13. Climate actionEnvironmental scienceNorwegian Coastal Currentlcsh:QBloomFrontiers in Marine Science
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Colonisation and diversification of the Zenaida dove (Zenaida aurita) in the Antilles: phylogeography, contemporary gene flow and morphological diver…

2013

12 pages; International audience; Caribbean avifaunal biogeography has been mainly studied based on mitochondrial DNA. Here, we investigated both past and recent island differentiation and micro-evolutionary changes in the Zenaida Dove (Zenaida aurita) based on combined information from one mitochondrial (Cytochrome c Oxydase subunit I, COI) and 13 microsatellite markers and four morphological characters. This Caribbean endemic and abundant species has a large distribution, and two subspecies are supposed to occur: Z. a. zenaida in the Greater Antilles (GA) and Z. a. aurita in the Lesser Antilles (LA). Doves were sampled on two GA islands (Puerto Rico and the British Virgin Islands) and six…

0106 biological sciencesZenaida auritaGene FlowBiogeographyPopulation DynamicsZoologyPopulation geneticslcsh:MedicineSubspecies[SDV.BID.SPT]Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomy010603 evolutionary biology01 natural sciencesDNA MitochondrialElectron Transport Complex IV03 medical and health sciencesAnimalsCluster Analysis14. Life underwaterlcsh:ScienceColumbidae030304 developmental biologyIsolation by distanceIslands0303 health sciencesAnalysis of Variance[ SDE.BE ] Environmental Sciences/Biodiversity and EcologyMultidisciplinarybiologyBase SequenceEcologylcsh:RBody WeightGenetic VariationBiodiversitybiology.organism_classificationColonisationPhylogeographyPhylogeographyCaribbean RegionHaplotypeslcsh:QAnimal Migration[SDE.BE]Environmental Sciences/Biodiversity and EcologyMartinique[ SDV.BID.SPT ] Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomyResearch ArticleMicrosatellite Repeats
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Improving scientific rigour in conservation evaluations and a plea deal for transparency on potential biases

2020

Abstract The delivery of rigorous and unbiased evidence on the effects of interventions lay at the heart of the scientific method. Here we examine scientific papers evaluating agri‐environment schemes, the principal instrument to mitigate farmland biodiversity declines worldwide. Despite previous warnings about rudimentary study designs in this field, we found that the majority of studies published between 2008 and 2017 still lack robust study designs to strictly evaluate intervention effects. Potential sources of bias that arise from the correlative nature are rarely mentioned, and results are still promoted by using a causal language. This lack of robust study designs likely results from …

0106 biological sciencesagri‐environment schemelcsh:QH1-199.5Psychological interventionIntervention effectlcsh:General. Including nature conservation geographical distribution010603 evolutionary biology01 natural sciencesRigourPleaorganic farmingbefore after control impactVDP::Matematikk og Naturvitenskap: 400::Basale biofag: 470Ecology Evolution Behavior and SystematicsNature and Landscape ConservationEcology010604 marine biology & hydrobiologyClinical study designevaluation of conservation interventionsPrincipal (computer security)biodiversity | causal languageRisk analysis (engineering)meta‐analysisMeta-analysisTransparency (graphic)PsychologyConservation Letters
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