Search results for "COMPARTMENT"

Physics of the nuclear pore complex: Theory, modeling and experiment

2021

Abstract The hallmark of eukaryotic cells is the nucleus that contains the genome, enclosed by a physical barrier known as the nuclear envelope (NE). On the one hand, this compartmentalization endows the eukaryotic cells with high regulatory complexity and flexibility. On the other hand, it poses a tremendous logistic and energetic problem of transporting millions of molecules per second across the nuclear envelope, to facilitate their biological function in all compartments of the cell. Therefore, eukaryotes have evolved a molecular “nanomachine” known as the Nuclear Pore Complex (NPC). Embedded in the nuclear envelope, NPCs control and regulate all the bi-directional transport between the…

Printing Life-Inspired Subcellular Scale Compartments with Autonomous Molecularly Crowded Confinement.

2019

A simple, rapid, and highly controlled platform to prepare life-inspired subcellular scale compartments by inkjet printing has been developed. These compartments consist of fL-scale aqueous droplets (few µm in diameter) incorporating biologically relevant molecular entities with programmed composition and concentration. These droplets are ink-jetted in nL mineral oil drop arrays allowing for lab-on-chip studies by fluorescence microscopy and fluorescence life time imaging. Once formed, fL-droplets are stable for several hours, thus giving the possibility of readily analyze molecular reactions and their kinetics and to verify molecular behavior and intermolecular interactions. Here, this pla…

epiModel: A system to build automatically systems of differential equations of compartmental type-epidemiological models

2011

In this paper we describe epiModel, a code developed in Mathematica that facilitates the building of systems of differential equations corresponding to type-epidemiological linear or quadratic models whose characteristics are defined in text files following an easy syntax. It includes the possibility of obtaining the equations of models involving age and/or sex groups. © 2011.

Sources and functional significance of IL-6 in shaping autoreactive T cell responses in the peripheral immune compartment and the CNS

2014

Early stages of test formation in larva of Ascidia malaca (Tunicata, Ascidiacea): ultrastructural and cytochemical investigations.

2003

Abstract The swimming larvae of ascidians are entirely covered by a hyalin coat called tunic, or test. This covering consists of two cuticular layers, C 1 and C 2 , which surround an inner compartment composed of an amorphous hyalin matrix with numerous fibrils dispersed inside. Data from the literature agree on the key role played by the cells of the larval ectodermic layer in the synthesis and secretion of larval test components. In the present article are reported ultrastructural and cytochemical investigations made during test formation in the swimming larva of Ascidia malaca . Besides confirming the role played by ectodermic cells during the early stages of test formation, the investig…

Vehicle routing problems with drones equipped with multi-package payload compartments

2022

The vehicle routing problem with drones (VRP-D) consists of designing combined truck-drone routes and schedules to serve a set of customers with specific requests and time constraints. In this paper, VRP-D is extended to include a fleet of drones equipped with multi-package payload compartments to serve more customers on a single trip. Moreover, a drone can return to a truck, different from the one from which it started, to swap its depleted battery and/or to pick up more packages. This problem, denoted as VRP-D equipped with multi-package payload compartments (VRP-D-MC), aims to maximize total profit. In this work, an adaptive multi-start simulated annealing (AMS-SA) metaheuristic algorith…

A Contribution Concerning the Unsettled Problem of Intrasplenic Microcirculation

1973

From morphological studies it is well known that the vascular bed of the spleen consists of at least two different compartments. Figure one schematically shows how the splenic microcirculation can be subdivided. One compartment corresponds to the white pulp (pathways number 1 and 2), the other compartment to the red pulp, for which the existance of either an open or a closed type of terminal vascular bed is discussed. Futhermore there are references that the microcirculation in the red pulp is not homogeneous but composed of both types, as illustrated by the pathways marked by number 3 and 4.

[9] Identification of carrier systems in plasma membranes of mammalian cells involved in transport of l-arginine

1999

Publisher Summary This chapter describes the transport systems and the corresponding carrier proteins involved in the L-arginine transport that have been described till date. The chapter also discusses the methods that have been used to characterize L-arginine transport in nitric oxide (NO) producing cells or tissues. L-arginine transport is mediated by multiple carrier systems, some of which have not yet been identified at a molecular level. It is conceivable that a modification of a carrier or an associated protein could alter its transport activity, resulting in the appearance of a carrier with altered transport characteristics. Considerable progress has been made in identifying cationic…

Variety of size and form of GRM2 bacterial microcompartment particles

2021

Bacterial microcompartments (BMCs) are bacterial organelles involved in enzymatic processes, such as carbon fixation, choline, ethanolamine and propanediol degradation, and others. Formed of a semi‐permeable protein shell and an enzymatic core, they can enhance enzyme performance and protect the cell from harmful intermediates. With the ability to encapsulate non‐native enzymes, BMCs show high potential for applied use. For this goal, a detailed look into shell form variability is significant to predict shell adaptability. Here we present four novel 3D cryo‐EM maps of recombinant Klebsiella pneumoniae GRM2 BMC shell particles with the resolution in range of 9 to 22 Å and nine novel 2D class…

Importance of Individual Enzymes in the Control of Ultimate Carcinogens

1995

The metabolic activation of most chemical mutagens and carcinogens is a prerequisite for their mutagenic and carcinogenic activity. Reactive metabolites are under the control of activating, inactivating and precursor sequestering enzymes. These enzymes are under the long-term control of induction and repression and under the short-term control of posttranslational modification. As far as carcinogen-metabolizing enzymes are concerned, posttranslational modification has received little attention. This short-term regulation may be especially important since it works fast and may affect the enzymatic activity as well as the degradation of the enzyme. The enzymatic activity is modified by activa…