Search results for "COMPARTMENT"

showing 10 items of 147 documents

Translocation of cdk2 to the nucleus during G1-phase in PDGF-stimulated human fibroblasts.

1997

We studied the subcellular distribution of cdk2 in synchronized, PDGF-stimulated human fibroblasts (FH109). After contact inhibition and serum depletion, more than 95% of FH109 cells were arrested in G0/G1-phase. PDGF-AB led to a 16-fold increase in proliferation compared with untreated cells. Cell cycle progression was studied by flow cytometric analysis, [3H]thymidine incorporation, and phosphorylation of the retinoblastoma gene product, pRB. Using Western blot analysis after subcellular fractionation, we revealed that after PDGF stimulation the phosphorylated (Thr 160), i.e., activated, form of cdk2 (33 kDa) first appeared in the nucleus at late G1-phase and persisted throughout until to…

CytoplasmFluorescent Antibody TechniqueProtein Serine-Threonine KinasesmedicineCDC2-CDC28 KinasesHumansCells CulturedCell NucleusPlatelet-Derived Growth FactorbiologyKinaseCyclin-dependent kinase 2Cyclin-Dependent Kinase 2G1 PhaseContact inhibitionBiological TransportCell BiologyCell cycleFibroblastsMolecular biologyCyclin-Dependent KinasesCell biologyCell CompartmentationCytosolmedicine.anatomical_structurebiology.proteinCell fractionationNucleusPlatelet-derived growth factor receptorCyclin-Dependent Kinase-Activating KinaseExperimental cell research
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RNA mediated toll-like receptor stimulation in health and disease

2012

Besides their well known functions in storage and translation of information nucleic acids have emerged as a target of pattern recognition receptors that drive activation of innate immunity. Due to the paucity of building block monomers used in nucleic acids, discrimination of host and microbial nucleic acids as a means of self/foreign discrimination is a complicated task. Pattern recognition receptors rely on discrimination by sequence, structural features and spatial compartmentalization to differentiate microbial derived nucleic acids from host ones. Microbial nucleic acid detection is important for the sensing of infectious danger and initiating an immune response to microbial attack. F…

DNA BacterialReviewComputational biologyBiologyAutoimmune DiseasesImmune systemAnimalsHumansinfectionsRNA Small Interferinginnate immunityMolecular BiologyToll-like receptorInnate immune systemBacteriaBase SequenceToll-Like ReceptorsautoimmunityPattern recognition receptormodificationsRNATranslation (biology)Bacterial InfectionsCell BiologyCompartmentalization (psychology)Immunity InnateNucleic acidsRNA BacterialImmunologyNucleic acidNucleic Acid Conformationtoll-like receptorProtein BindingRNA Biology
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Slow Magnetic Relaxation in a Co (II)–Y (III) Single‐Ion Magnet with Positive Axial Zero‐Field Splitting

2013

This work was supported by the MINECO (Spain) (Project CTQ2011-24478), the Junta de Andalucía (FQM-195 and Project of excellence P08-FQM-03705), and the University of Granada. E.R. and E.Cr. thank MINECO grant No. CTQ2011-23862-C02-01 and Generalitat de Catalunya grant No. 2009SGR-1459, for financial support. We would like to thank Prof. Liviu Chibotaru for providing us the SINGLE_ANISO program and Dr. Andrew Ozarowski for the EPR simulation software. E.K.B. thanks the EPSRC and Leverhulme Trust for financial support. The NHMFL is funded by the NSF, DoE, and the state of Florida. J.C. acknowledges financial support by the Spanish Ministerio de Ciencia e Innovación through projects CTQ2010-1…

DYNAMICSModels Molecularpositive zero-field splittingINSchemistry.chemical_elementZero field splitting010402 general chemistry01 natural sciences7. Clean energyCatalysisO ligandsMOLECULE MAGNETNuclear magnetic resonancesingle ion magnetsYttriumMagnetic relaxationCompartmental ligandAnisotropyHYSTERESISComputingMilieux_MISCELLANEOUSANISOTROPY[PHYS]Physics [physics]IonsMolecular StructureCondensed matter physicsSingle ion010405 organic chemistryChemistryCobaltGeneral ChemistryYttriumNBARRIERcobaltCo(II)FAMILY0104 chemical sciencesyttriumHysteresisPositive axial ZFSDYSPROSIUM(III)TBMagnetic FieldsMagnetMagnetsSingle ion magnetCOMPLEXESCobaltBEHAVIOR
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Abdominal Compartment Syndrome: diagnostic evaluation and possible treatment

2020

BACKGROUND: Abdominal compartment syndrome (ACS) is a clinical condition caused by an increase in intra-abdominal pressure. The incidence is variable, based on the type of patients taken into consideration, increasing exponentially in critical conditions, such as traumatized, burned patients in shock. The syndrome can also follow surgical procedures like transplantation of abdominal organs, for example configuring rare pictures such as RACS (post-transplant kidney syndrome). In most cases the symptoms are non-specific and varied according to the different etiology of the ACS, therefore the diagnosis may not be immediate. AIM: The aim of this work is to evaluate the best therapeutic approach…

Early DiagnosisRenal Allograft Compartment SyndromeIncidenceHumansAbdomen decompressionIntra-Abdominal HypertensionDecompression SurgicalSurgical emergency
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Conditional particle filters with diffuse initial distributions

2020

Conditional particle filters (CPFs) are powerful smoothing algorithms for general nonlinear/non-Gaussian hidden Markov models. However, CPFs can be inefficient or difficult to apply with diffuse initial distributions, which are common in statistical applications. We propose a simple but generally applicable auxiliary variable method, which can be used together with the CPF in order to perform efficient inference with diffuse initial distributions. The method only requires simulatable Markov transitions that are reversible with respect to the initial distribution, which can be improper. We focus in particular on random-walk type transitions which are reversible with respect to a uniform init…

FOS: Computer and information sciencesStatistics and ProbabilityComputer scienceGaussianBayesian inferenceMarkovin ketjut02 engineering and technology01 natural sciencesStatistics - ComputationArticleTheoretical Computer ScienceMethodology (stat.ME)010104 statistics & probabilitysymbols.namesakeAdaptive Markov chain Monte Carlotilastotiede0202 electrical engineering electronic engineering information engineeringStatistical physics0101 mathematicsDiffuse initialisationHidden Markov modelComputation (stat.CO)Statistics - MethodologyState space modelHidden Markov modelbayesian inferenceMarkov chaindiffuse initialisationbayesilainen menetelmäconditional particle filtersmoothingmatemaattiset menetelmät020206 networking & telecommunicationsConditional particle filterCovariancecompartment modelRandom walkCompartment modelstate space modelComputational Theory and MathematicsAutoregressive modelsymbolsStatistics Probability and UncertaintyParticle filterSmoothingSmoothing
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Centrins in retinal photoreceptor cells: regulators in the connecting cilium.

2008

Changes in the intracellular Ca2+ concentration regulate the visual signal transduction cascade directly or more often indirectly through Ca2+-binding proteins. Here we focus on centrins, which are members of a highly conserved subgroup of the EF-hand superfamily of Ca2+-binding proteins in photoreceptor cells of the vertebrate retina. Centrins are commonly associated with centrosome-related structures. In mammalian retinal photoreceptor cells, four centrin isoforms are expressed as prominent components in the connecting cilium linking the light-sensitive outer segment compartment with the metabolically active inner segment compartment. Our data indicate that Ca2+-activated centrin isoforms…

Gene isoformgenetic structuresChromosomal Proteins Non-HistoneBiologyContractile ProteinsHeterotrimeric G proteinmedicineCompartment (development)AnimalsHumansCiliaEye ProteinsVision OcularRetinaCalcium-Binding ProteinsSensory SystemsCell biologyOphthalmologymedicine.anatomical_structureCentrinCalciumsense organsTransducinSignal transductionIntracellularPhotoreceptor Cells VertebrateProgress in retinal and eye research
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Chasing the Origin of Viruses: Capsid-Forming Genes as a Life-Saving Preadaptation within a Community of Early Replicators

2015

Virus capsids mediate the transfer of viral genetic information from one cell to another, thus the origin of the first viruses arguably coincides with the origin of the viral capsid. Capsid genes are evolutionarily ancient and their emergence potentially predated even the origin of first free-living cells. But does the origin of the capsid coincide with the origin of viruses, or is it possible that capsid-like functionalities emerged before the appearance of true viral entities? We set to investigate this question by using a computational simulator comprising primitive replicators and replication parasites within a compartment matrix. We observe that systems with no horizontal gene transfer…

Genes ViralSciencevirusesorigin of virusesBiologyVirus Physiological PhenomenaVirus ReplicationEvolution Molecularvirus capsids03 medical and health sciencesCompartment (development)Gene030304 developmental biologyGenetics0303 health sciencesMultidisciplinaryModels Genetic030306 microbiologyHuman evolutionary geneticsta1184ta1183QRBiological Evolutioncapsid genesCapsidViral replicationViral evolutionHorizontal gene transferMedicineCapsid ProteinsResearch ArticleVirus Physiological Phenomena
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optomotor-blind suppresses instability at the A/P compartment boundary of the Drosophila wing.

2008

Formation and function of the A/P compartment boundary of the Drosophila wing have been studied intensely. The boundary prevents mingling of A and P cells, is characterized by an expression discontinuity of several genes like engrailed, Cubitus interruptus, hedgehog and decapentaplegic and is essential for patterning the wing. Compared with segmental or compartmental boundaries in several other systems which generally manifest as folds or clefts, the wing A/P boundary is morphologically inconspicuous in both the larval and adult stage. We show here that the Drosophila wing A/P boundary, too, is susceptible to fold and cleft formation and that these processes are suppressed by the T-box tran…

GeneticsEmbryologyanimal structuresWingDecapentaplegicMorphogenesisGene Expression Regulation DevelopmentalNerve Tissue ProteinsBiologyMicrotubulesengrailedCell biologyAdherens junctionCompartment (development)AnimalsDrosophila ProteinsWings AnimalDrosophilaEnhancerT-Box Domain ProteinsHedgehogDevelopmental BiologyBody PatterningSequence DeletionMechanisms of development
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Spatial discontinuity of Optomotor-blind expression in the Drosophila wing imaginal disc disrupts epithelial architecture and promotes cell sorting

2010

Abstract Background Decapentaplegic (Dpp) is one of the best characterized morphogens, required for dorso-ventral patterning of the Drosophila embryo and for anterior-posterior (A/P) patterning of the wing imaginal disc. In the larval wing pouch, the Dpp target gene optomotor-blind (omb) is generally assumed to be expressed in a step function above a certain threshold of Dpp signaling activity. Results We show that the transcription factor Omb forms, in fact, a symmetrical gradient on both sides of the A/P compartment boundary. Disruptions of the Omb gradient lead to a re-organization of the epithelial cytoskeleton and to a retraction of cells toward the basal membrane suggesting that the O…

GeneticsWinganimal structuresbiologyDecapentaplegicMorphogenesisNerve Tissue ProteinsCell sortingbiology.organism_classificationCell biologyImaginal discDrosophila melanogasterlcsh:Biology (General)Research articleAnimalsDrosophila ProteinsWings AnimalCompartment (development)Drosophila melanogasterT-Box Domain Proteinslcsh:QH301-705.5Drosophila ProteinSignal TransductionDevelopmental BiologyBMC Developmental Biology
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Contact-dependent inhibition of growth of normal diploid human fibroblasts by plasma membrane glycoproteins.

1988

Homeostasis in vivo is maintained by a highly complex network of positive and negative signals. At the cellular level, this regulatory microenvironment can be divided, in a simplified fashion, into two major compartments: the humoral compartment, including compounds such as hormones, growth factors and nutrients, and the contact-environment compartment, including cell-cell and cell-matrix interactions. At least in cultures of diploid, non-transformed cells, cell-cell and cell-matrix interactions have been shown to be of major importance for the regulation of growth as well as of differentiation. Although until now the glycoprotein involved in the contact-dependent inhibition of growth has n…

GlycanCell CommunicationPlatelet Membrane GlycoproteinsBiochemistrychemistry.chemical_compoundmedicineCompartment (development)AnimalsHumansReceptors ImmunologicFibroblastReceptorCells Culturedchemistry.chemical_classificationMembrane GlycoproteinsbiologyContact InhibitionCell MembraneAntibodies MonoclonalBiological activityGeneral MedicineFibroblastsMembrane glycoproteinsmedicine.anatomical_structureCell Transformation NeoplasticchemistryBiochemistryPlatelet Glycoprotein GPIb-IX Complexbiology.proteinGrowth inhibitionGlycolipidsGlycoproteinCell DivisionBiochimie
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