Search results for "COPI"

showing 10 items of 2618 documents

Trochoidal motion and pair generation in skyrmion and antiskyrmion dynamics under spin-orbit torques

2018

Magnetic skyrmions are swirling magnetic spin structures that could be used to build next-generation memory and logic devices. They can be characterized by a topological charge that describes how the spin winds around the core. The dynamics of skyrmions and antiskyrmions, which have opposite topological charges, are typically described by assuming a rigid core. However, this reduces the set of variables that describe skyrmion motion. Here we theoretically explore the dynamics of skyrmions and antiskyrmions in ultrathin ferromagnetic films and show that current-induced spin–orbit torques can lead to trochoidal motion and skyrmion–antiskyrmion pair generation, which occurs only for either the…

0301 basic medicineFOS: Physical sciences01 natural sciencesSpin magnetic moment03 medical and health sciencesMesoscale and Nanoscale Physics (cond-mat.mes-hall)0103 physical sciencesElectrical and Electronic Engineering010306 general physicsInstrumentationTopological quantum numberSpin-½PhysicsCondensed Matter - Materials ScienceCondensed Matter - Mesoscale and Nanoscale PhysicsSkyrmionDynamics (mechanics)Materials Science (cond-mat.mtrl-sci)Condensed Matter::Mesoscopic Systems and Quantum Hall EffectHelicitySymmetry (physics)[PHYS.PHYS.PHYS-GEN-PH]Physics [physics]/Physics [physics]/General Physics [physics.gen-ph]Electronic Optical and Magnetic Materials030104 developmental biologyClassical mechanicsOrbit (dynamics)
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N-Linked Glycosylation of the p24 Family Protein p24δ5 Modulates Retrograde Golgi-to-ER Transport of K/HDEL Ligands in Arabidopsis

2017

Abstract The K/HDEL receptor ERD2 mediates the transport of soluble endoplasmic reticulum (ER)-resident proteins containing a C-terminal K/HDEL signal from the Golgi apparatus back to the ER via COPI (COat Protein I)-coated vesicles. Sorting of ERD2 within COPI vesicles is facilitated by p24 proteins. In Arabidopsis , p24δ5 has been shown to interact directly with ERD2 via its luminal GOLD (GOLgi Dynamics) domain and with COPI proteins via its cytoplasmic C-terminal tail at the acidic pH of the Golgi apparatus. Several members of the p24 family in mammals and yeast have been shown to be glycosylated, but whether Arabidopsis p24 proteins are glycosylated and the role of the sugar moiety in p…

0301 basic medicineGlycosylationArabidopsisGolgi ApparatusPlant ScienceBiologyEndoplasmic ReticulumBiotecnologia03 medical and health sciencessymbols.namesakeN-linked glycosylationArabidopsisMolecular BiologyCOPIIArabidopsis ProteinsVesicleEndoplasmic reticulumCOPIGolgi apparatusbiology.organism_classificationCell biology030104 developmental biologyCytoplasmsymbolsProteïnes
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Hepatitis B Virus Exploits ERGIC-53 in Conjunction with COPII to Exit Cells.

2020

Several decades after its discovery, the hepatitis B virus (HBV) still displays one of the most successful pathogens in human populations worldwide. The identification and characterization of interactions between cellular and pathogenic components are essential for the development of antiviral treatments. Due to its small-sized genome, HBV highly depends on cellular functions to produce and export progeny particles. Deploying biochemical-silencing methods and molecular interaction studies in HBV-expressing liver cells, we herein identified the cellular ERGIC-53, a high-mannose-specific lectin, and distinct components of the endoplasmic reticulum (ER) export machinery COPII as crucial factor…

0301 basic medicineHepatitis B virusSec24AEndosomeHBV assemblyVesicular Transport ProteinsN-glycosylationBiologymedicine.disease_causeEndoplasmic ReticulumTransfectionGenomeESCRTArticle03 medical and health sciencesN-linked glycosylationViral life cycleCell Line TumormedicineHBVHumansCOPIICOPIIlcsh:QH301-705.5Hepatitis B virus030102 biochemistry & molecular biologyEndosomal Sorting Complexes Required for TransportEndoplasmic reticulumVirionMembrane ProteinsGeneral MedicineHepatitis BHBV egressERGIC-53Cell biologyProtein Transport030104 developmental biologyMannose-Binding Lectinslcsh:Biology (General)HepatocytesLMAN-1COP-Coated VesiclesCells
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In vitro antileishmanial activity of trans-stilbene and terphenyl compounds

2016

Leishmaniasis are globally widespread parasitic diseases which often leads to death if left untreated. Currently available drugs present different drawbacks, so there is an urgent need to develop new, safe and cost-effective drugs against leishmaniasis. In this study we tested a small library of trans-stilbene and terphenyl derivatives against promastigote, amastigotes and intramacrophage amastigote forms of Leishmania infantum. Two compounds of the series, the trans-stilbene 3 and the terphenyl 11, presented the best activity and safety profiles. Terphenyl 11 showed a leshmanicidal activity higher than pentostam and the ability to induce apoptosis selectively in Leishmania infantum while s…

0301 basic medicineMacrophageApoptosisPharmacologychemistry.chemical_compoundStilbenesLeishmania infantumProgrammed cell deathbiologyCell CycleGeneral MedicineU937 CellsFlow CytometryInfectious DiseasesTerphenyl CompoundsLeishmania infantumU937 CellHumanTerphenylLeishmaniasiImmunologyAntiprotozoal AgentsContext (language use)Cercopithecus03 medical and health sciencesInhibitory Concentration 50Structure-Activity RelationshipTerphenylTerphenyl Compoundsparasitic diseasesmedicineStructure–activity relationshipAnimalsHumansAmastigoteLeishmaniasis; Programmed cell death; Stilbenes; Terphenyls; Animals; Antiprotozoal Agents; Apoptosis; Cell Cycle; Cercopithecus; Epithelial Cells; Flow Cytometry; Humans; Inhibitory Concentration 50; Leishmania infantum; Macrophages; Microscopy Fluorescence; Stilbenes; Structure-Activity Relationship; Terphenyl Compounds; U937 Cells; Parasitology; ImmunologyEpithelial CellAnimalCercopithecuMacrophagesTerphenylsApoptosiLeishmaniasisEpithelial CellsTerphenyl Compoundmedicine.diseasebiology.organism_classificationIn vitro030104 developmental biologychemistryMicroscopy FluorescenceStilbeneAntiprotozoal AgentImmunologyParasitology
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The evolution of the Cercopithecini: a (post)modern synthesis.

2017

The Cercopithecini, or African guenon monkeys, are one of the most diverse clades of living primates and comprise the most species-rich clade of Catarrhini. Species identity is announced by flamboyant coloration of the facial and genital regions and, more cryptically, by vigorous chromosomal rearrangements among taxa. Beneath the skin, however, these animals are skeletally conservative and show low levels of genetic sequence divergence consonant with recent divergence between congeneric species. The guenons clearly demonstrate that morphological, cytogenetic, and reproductive differentiation proceed at different rates during speciation. We review diverse kinds of data in an effort to unders…

0301 basic medicineMaleGenetic SpeciationCatarrhiniSettore BIO/08 - AntropologiaAnthropology PhysicalEvolution Molecular03 medical and health sciencesCercopithecinaeGenetic algorithmAnimalsCladePhylogenyCercopithecinibiologyBehavior AnimalSkullCercopithecoidea Chromosomes Fissioning Guenons PhylogenyGeneral Medicinebiology.organism_classificationGuenonBiological Evolution030104 developmental biologyTaxonEvolutionary biologyAnthropologyAfricaFemaleEvolutionary anthropology
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Increased ischemic stroke, acute coronary artery disease and mortality in patients with granulomatosis with polyangiitis and microscopic polyangiitis.

2018

International audience; Objective: The aim of our study was to assess major cardiovascular event incidence, predictors, and mortality in ANCA-associated vasculitis (AAV).Methods: We conducted a retrospective cohort study of all GPA or MPA, according to Chapel Hill Consensus Conference classification criteria, diagnosed between 1981 and 2015. Major cardiovascular event was defined as acute coronary artery disease, or ischemic stroke, or peripheral vascular disease requiring a revascularization procedure. We calculated the comparative morbidity/mortality figure (CMF) and we used Cox proportional hazards regression models to assess the risk of coronary artery disease, ischemic stroke associate…

0301 basic medicineMaleRiskmedicine.medical_specialtyImmunologyPopulationMicroscopic PolyangiitisCoronary Artery DiseaseAntibodies Antineutrophil CytoplasmicCoronary artery diseaseCohort Studies03 medical and health sciences0302 clinical medicine[SDV.MHEP.CSC]Life Sciences [q-bio]/Human health and pathology/Cardiology and cardiovascular systemIschemiaInternal medicineImmunology and AllergyMedicineHumanseducationStrokeAgedProportional Hazards ModelsRetrospective Studies030203 arthritis & rheumatologyeducation.field_of_studyIschemic strokebusiness.industryVascular diseaseIncidence (epidemiology)Mortality rateGranulomatosis with PolyangiitisRetrospective cohort studyMiddle Agedmedicine.diseaseSurvival Analysis3. Good healthStroke030104 developmental biologyAcute DiseaseCardiologyFemalebusinessGranulomatosis with polyangiitisANCA-Associated vasculitis[SDV.MHEP]Life Sciences [q-bio]/Human health and pathologyFollow-Up StudiesJournal of autoimmunity
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Prediction of ferroelectricity-driven Berry curvature enabling charge- and spin-controllable photocurrent in tin telluride monolayers

2019

In symmetry-broken crystalline solids, pole structures of Berry curvature (BC) can emerge, and they have been utilized as a versatile tool for controlling transport properties. For example, the monopole component of the BC is induced by the time-reversal symmetry breaking, and the BC dipole arises from a lack of inversion symmetry, leading to the anomalous Hall and nonlinear Hall effects, respectively. Based on first-principles calculations, we show that the ferroelectricity in a tin telluride monolayer produces a unique BC distribution, which offers charge- and spin-controllable photocurrents. Even with the sizable band gap, the ferroelectrically driven BC dipole is comparable to those of …

0301 basic medicineMaterials scienceBand gapSciencePoint reflectionGeneral Physics and AstronomyFOS: Physical sciences02 engineering and technologyGeneral Biochemistry Genetics and Molecular BiologyArticle03 medical and health scienceschemistry.chemical_compoundCondensed Matter::Materials ScienceNanoscience and technologyMonolayerMesoscale and Nanoscale Physics (cond-mat.mes-hall)Symmetry breakinglcsh:ScienceCondensed Matter - Materials ScienceMultidisciplinaryCondensed matter physicsCondensed Matter - Mesoscale and Nanoscale PhysicsPhysicsQMaterials Science (cond-mat.mtrl-sci)General Chemistry021001 nanoscience & nanotechnologyCondensed Matter::Mesoscopic Systems and Quantum Hall EffectFerroelectricityMaterials scienceTin tellurideDipole030104 developmental biologychemistrylcsh:QBerry connection and curvature0210 nano-technology
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Out-of-plane orientation of luminescent excitons in two-dimensional indium selenide.

2019

Van der Waals materials offer a wide range of atomic layers with unique properties that can be easily combined to engineer novel electronic and photonic devices. A missing ingredient of the van der Waals platform is a two-dimensional crystal with naturally occurring out-of-plane luminescent dipole orientation. Here we measure the far-field photoluminescence intensity distribution of bulk InSe and two-dimensional InSe, WSe2 and MoSe2. We demonstrate, with the support of ab-initio calculations, that layered InSe flakes sustain luminescent excitons with an intrinsic out-of-plane orientation, in contrast with the in-plane orientation of dipoles we find in two-dimensional WSe2 and MoSe2 at room-…

0301 basic medicineMaterials sciencePhotoluminescenceElectronic properties and materialsExcitonScienceGeneral Physics and Astronomychemistry.chemical_elementPhysics::Optics02 engineering and technologyTwo-dimensional materials7. Clean energyGeneral Biochemistry Genetics and Molecular BiologyArticleCrystal03 medical and health sciencessymbols.namesakeCondensed Matter::Materials SciencePhysics::Atomic and Molecular ClustersPhysics::Atomic Physicslcsh:ScienceMultidisciplinarybusiness.industryCondensed Matter::OtherQGeneral Chemistry021001 nanoscience & nanotechnologyCondensed Matter::Mesoscopic Systems and Quantum Hall EffectDipole030104 developmental biologySemiconductorchemistrysymbolsOptoelectronicslcsh:Qvan der Waals forcePhotonics0210 nano-technologybusinessIndiumNature communications
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Diffusion through thin membranes: Modeling across scales

2016

From macroscopic to microscopic scales it is demonstrated that diffusion through membranes can be modeled using specific boundary conditions across them. The membranes are here considered thin in comparison to the overall size of the system. In a macroscopic scale the membrane is introduced as a transmission boundary condition, which enables an effective modeling of systems that involve multiple scales. In a mesoscopic scale, a numerical lattice-Boltzmann scheme with a partial-bounceback condition at the membrane is proposed and analyzed. It is shown that this mesoscopic approach provides a consistent approximation of the transmission boundary condition. Furthermore, analysis of the mesosco…

0301 basic medicineMaterials scienceScale (ratio)läpäisevyys01 natural sciencesthin membranesQuantitative Biology::Cell BehaviorQuantitative Biology::Subcellular Processes03 medical and health sciencesdiffuusio (fysikaaliset ilmiöt)transmission boundary condition0103 physical sciencestumaBoundary value problemDiffusion (business)010306 general physicsEnvelope (waves)numerical lattice-Boltzmann schemeMesoscopic physicsta114cell nucleusdiffusionta1182Mechanicsnuclear envelope030104 developmental biologyMembraneMacroscopic scaleParticlepermeabilityPhysical Review E
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Reconstruction of Diverse Verrucomicrobial Genomes from Metagenome Datasets of Freshwater Reservoirs

2017

The phylum Verrucomicrobia contains freshwater representatives which remain poorly studied at the genomic, taxonomic, and ecological levels. In this work we present eighteen new reconstructed verrucomicrobial genomes from two freshwater reservoirs located close to each other (Tous and Amadorio, Spain). These metagenomeassembled genomes (MAGs) display a remarkable taxonomic diversity inside the phylum and comprise wide ranges of estimated genome sizes (from 1.8 to 6 Mb). Among all Verrucomicrobia studied we found some of the smallest genomes of the Spartobacteria and Opitutae classes described so far. Some of the Opitutae family MAGs were small, cosmopolitan, with a general heterotrophic met…

0301 basic medicineMicrobiology (medical)Range (biology)030106 microbiologylcsh:QR1-502BiologyMicrobiologyGenomelcsh:Microbiology579 - Microbiología03 medical and health sciencesgenome streamliningCopiotrophfreshwater VerrucomicrobiaCladeGeneOriginal ResearchGeneticsmetagenomicsPhylumVerrucomicrobiabiology.organism_classification030104 developmental biologyrhodopsinMetagenomicsEvolutionary biologynitrogen fixationFrontiers in Microbiology
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