Search results for "Calcite"

showing 10 items of 191 documents

A minimal molecular toolkit for mineral deposition? Biochemistry and proteomics of the test matrix of adult specimens of the sea urchin Paracentrotus…

2016

12 pages; International audience; The sea urchin endoskeleton consists of a magnesium-rich biocalcite comprising a small amount of occluded organic macromolecules. This structure constitutes a key-model for understanding the mineral - organics interplay, and for conceiving in vitro bio-inspired materials with tailored properties. Here we employed a deep-clean technique to purify the occluded proteins from adult Paracentrotus lividus tests. We characterized them by 1- and 2D-electrophoreses, ELISA and immunoblotting, and using liquid chromatography coupled with Mass Spectrometry (nanoLC-MS/MS), we identified two metalloenzymes (carbonic anhydrase and MMP), a set of MSP130 family members, sev…

0301 basic medicineBiomineralizationProteomicsSea urchinBiophysicsMatrix (biology)ProteomicsBiochemistryMineralization (biology)Paracentrotus lividusMass Spectrometry03 medical and health sciences0302 clinical medicinebiology.animal[SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN]Animals[SDV.IB.BIO]Life Sciences [q-bio]/Bioengineering/BiomaterialsSea urchinExtracellular Matrix ProteinsCarbonic anhydrasebiologyChemistryCalcitebiology.organism_classification[ SDV.IB.BIO ] Life Sciences [q-bio]/Bioengineering/BiomaterialsIn vitroExtracellular MatrixCalcifying matrixC-type lectin030104 developmental biologyBiochemistry[ SDV.BBM.GTP ] Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN]Paracentrotus030217 neurology & neurosurgeryMacromoleculeBiomineralization
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Petrography and carbonate isotope stratigraphy from MIS AND-1B core, Antarctica: Evidence of the early Pliocene warming event

2011

Abstract A large portion of ANDRILL (ANtarctic geological DRILLing) core AND-1B recovered in the Western Ross Sea and spanning the early Pliocene has been investigated in order to obtain a detailed carbonate isotope record from Antarctic margin sediments through the early Pliocene warming event. Petrographic observations and mineralogical analyses reveal the authigenic nature of the carbonate and small proportions of Fe and Mg incorporated within the calcite lattice. High productivity conditions testified by ~ 80 m-thick diatomite interval (383 to 460 mbsf) well fit with the composite nature of the authigenic carbonate generally characterizing organic matter-rich sediments. As is known, sed…

ANDRILLCalciteGlobal and Planetary Changegeographygeography.geographical_feature_categoryδ13CStable isotope ratioδ18OGlacierAuthigenicearly PlioceneOceanographypalaeoclimatePetrographychemistry.chemical_compoundPaleontologychemistrystable isotopeAntarcticaCarbonateGeologyGlobal and Planetary Change
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Sr-isotope analysis of speleothems by LA-MC-ICP-MS: High temporal resolution and fast data acquisition

2017

Speleothems are well established climate archives. A wide array of geochemical proxies, including stable isotopes and trace elements are present within speleothems to reconstruct past climate variability. However, each proxy is influenced by multiple factors, often hampering robust interpretation. Sr isotope ratios (87Sr/86Sr) can provide useful information about water residence time and water mixing in the host rock, as they are not fractionated during calcite precipitation. Laser ablation multi-collector-inductively coupled plasma mass spectrometry (LA-MC-ICP-MS) has rarely been used for determination of Sr isotope signatures in speleothems, as speleothems often do not possess appropriate…

Ablation TechniquesSpeleothemMineralogyF700F800F600010502 geochemistry & geophysics01 natural sciencesF900chemistry.chemical_compoundGeochemistry and Petrology0105 earth and related environmental sciencesIsotope analysisCalcitegeographygeography.geographical_feature_categoryLaser ablationIsotopeStable isotope ratio010401 analytical chemistryGeology0104 chemical scienceschemistry13. Climate actionCarbonateGeology
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Characterization of the Teeth Skeletal Matrix from <i>Arbacia lixula</i>

2016

The teeth of sea urchins are highly complex composite structures, composed predominantly of high magnesium calcite, and of a minor heterogeneous assemblage of organic macromolecules that are occluded within the mineral. The organic matrix fulfils important functions in mineralization, in addition to giving the mineral phase peculiar mechanical properties, different from that of purely inorganic calcite. Nevertheless, the composition and function of individual components of the organic matrix still remains largely unknown. Up to now, the detailed protein repertoire of teeth from a single sea urchin species (Strongylocentrotus purpuratus, order Camarodonta) was investigated. In this study, we…

AlanineCalcitebiologyChemistryMechanical EngineeringArbacioidabiology.organism_classificationStrongylocentrotus purpuratusMineralization (biology)chemistry.chemical_compoundBiochemistryMechanics of Materialsbiology.animalGeneral Materials ScienceSea urchinArbacia lixulaBiomineralizationKey Engineering Materials
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Adsorption Structures of Amino Acids on Calcite(104)

2015

Elucidating the interaction details of proteins with the most stable cleavage plane of calcite , namely calcite(104), is of great importance for understanding the physicochemical mechanisms behind biomineralisation. In this context, amino acids are generally believed to serve as suitable model molecules, as they constitute the basic building blocks of proteins. In this work, we present a non-contact atomic force microscopy (NC-AFM) investigation of the adsorption of five proteinogenic amino acids on calcite(104) under ultra-high vacuum (UHV) conditions. For studying the structures formed from comparatively large amino acids, enantiopure tryptophan, tyrosine and aspartic acid molecules are d…

Alaninechemistry.chemical_classificationCalcitechemistry.chemical_compoundCrystallographychemistryGlycineTryptophanSide chainContext (language use)Chirality (chemistry)Amino acid
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Ice nucleation properties of the most abundant mineral dust phases

2008

[1] The ice nucleation properties of the nine most abundant minerals occurring in desert aerosols (quartz, albite, microcline, kaolinite, montmorillonite, illite, calcite, gypsum, and hematite) were investigated by environmental scanning electron microscopy (ESEM). In this instrument, the pure minerals are exposed to water vapor at variable pressures and temperatures. The crystallization of ice on the mineral particles is observed by secondary electron imaging, and the supersaturation for an activated particle fraction of 1–3% is determined as function of temperature. In all experiments, condensation of water prior to ice formation was not observed within detectable limits, even at water su…

Atmospheric ScienceSoil ScienceMineralogyAquatic ScienceMineral dustengineering.materialOceanographychemistry.chemical_compoundAlbiteGeochemistry and PetrologyEarth and Planetary Sciences (miscellaneous)KaoliniteRelative humidityEarth-Surface ProcessesWater Science and TechnologyCalciteSupersaturationEcologyPaleontologyForestryGeophysicschemistrySpace and Planetary ScienceIlliteIce nucleusengineeringGeologyJournal of Geophysical Research
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Hydrothermal macroscopic Fe-sepiolite from Oujda Mounts (Middle Atlas, Eastern Morocco)

2008

The Triassic-Jurassic series in the Oujda Mounts (Middle Atlas, NE Morocco) includes two basaltic units. The whole sequence is crosscut by veins filled with Fe-sepiolite + chalcedony + calcite + smectite and mixed layer talc-saponite. Fe-sepiolite occurs as macroscopic fibres and is one of the latest mineral phases in the filling sequence of the veins. The compositional relationships and crystallographic parameters obtained on carefully selected samples of sepiolite are compared with previous data, and support the actual development of Mg-Fe substitution in this clay mineral, given the adequate hydrothermal conditions. Genesis of this uncommon variety of sepiolite in veins is interpreted as…

BasaltCalciteMineralChalcedonySepioliteGeochemistryMineralogyGeologyengineering.materialHydrothermal circulationchemistry.chemical_compoundSequence (geology)chemistryengineeringClay mineralsGeologyEarth-Surface ProcessesJournal of African Earth Sciences
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Shell proteome of rhynchonelliform brachiopods.

2015

7 pages; International audience; Brachiopods are a phylum of marine invertebrates that have an external bivalved shell to protect their living tissues. With few exceptions, this biomineralized structure is composed of calcite, mixed together with a minor organic fraction, comprising secreted proteins that become occluded in the shell structure, once formed. This organic matrix is thought to display several functions, in particular, to control mineral deposition and to regulate crystallite shapes. Thus, identifying the primary structure of matrix proteins is a prerequisite for generating bioinspired materials with tailored properties. In this study, we employed a proteomic approach to identi…

BiomineralizationProteomicsProteomeShell (structure)BrachiopodsBiologyMatrix (biology)ProteomicsCalcium CarbonatePaleontologychemistry.chemical_compoundCalcification PhysiologicAnimal ShellsStructural Biology[SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN]ShellAnimals14. Life underwater[SDV.IB.BIO]Life Sciences [q-bio]/Bioengineering/BiomaterialsCalciteMineralsPhylumMarine invertebratesExtracellular matrix[ SDV.IB.BIO ] Life Sciences [q-bio]/Bioengineering/BiomaterialsInvertebrateschemistryEvolutionary biology[ SDV.BBM.GTP ] Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN]ProteomePeptidesBiomineralization
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Multi-isotopic and trace element evidence against different formation pathways for oyster microstructures

2021

Geochimica et cosmochimica acta 308, 326-352 (2021). doi:10.1016/j.gca.2021.06.012

BiomineralizationRARE-EARTH-ELEMENTSOysternitrogen isotopes550010504 meteorology & atmospheric sciencesPaleoclimateXRF010502 geochemistry & geophysicsSulfur isotopes01 natural sciencesMineralization (biology)Clumped isotopesMg/Cachemistry.chemical_compoundSclerochronologyddc:550CALCIFICATION RATECRASSOSTREA-GIGASCalcitebiologyStable isotope ratioOysterDistribution coefficientBivalveCalcitetrace elementOxygen isotope ratio cyclePacific oysterSTABLE-ISOTOPEStable isotopeIsotopes of nitrogenChemistryNORTH-SEASEMMECHANICAL CHARACTERISTICSmicrostructureCrassostrea gigas [Portuguese oyster]Ostreidae [oysters]MineralogyGeochemistry and Petrologybiology.animalClumpcd isotopes0105 earth and related environmental sciencesTrace elementARAGONITIC BIVALVE SHELLSbiology.organism_classificationBivalviachemistryTEMPERATURE-DEPENDENCEFORAMINIFERAL CALCITECrassostrea gigasHIGH-RESOLUTION
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Carbonate deposition and diagenesis in evaporitic environments: The evaporative and sulphur-bearing limestones during the settlement of the Messinian…

2015

The depositional and diagenetic processes involved in the formation of carbonates in the evaporitic environment of the Messinian Salinity Crisis are investigated in Southern Italy (Sicily and Calabria). Strong differences are observed between the studied sections that reflect specific depositional and diagenetic evolution in the interconnected sub-basins resulting from the syn-sedimentary tectonic fragmentation of the Central Sicilian and Calabrian domains. These carbonates formed diachronously in restricted perched sub-basins between the Tripoli Formation and the hypersaline settings of the MSC. The Calcare di Base (CdB) that can be interbedded with gypsum layers occurs rhythmically at the…

Calcare di BaseGypsumBacterial sulphate reductionSettore GEO/02 - Geologia Stratigrafica E Sedimentologica010504 meteorology & atmospheric sciencesEvaporiteGeochemistryDiagenetic carbonateSulphur LimestoneMineralogy[PHYS.PHYS.PHYS-GEO-PH]Physics [physics]/Physics [physics]/Geophysics [physics.geo-ph]engineering.material010502 geochemistry & geophysicsOceanography01 natural scienceschemistry.chemical_compoundCelestineMessinian Salinity Crisis Carbonate SulphurEcology Evolution Behavior and SystematicsComputingMilieux_MISCELLANEOUS0105 earth and related environmental sciencesEarth-Surface ProcessesCalciteAnhydriteSettore GEO/07 - Petrologia E PetrografiaMessinian Salinity CrisiPaleontologySettore GEO/01 - Paleontologia E PaleoecologiaSettore GEO/08 - Geochimica E VulcanologiaDiagenesisEvaporitechemistryengineeringHaliteCarbonateGeology
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