Search results for "Catalysis"

showing 10 items of 5944 documents

18F-labeling of peptides by means of an organosilicon-based fluoride acceptor.

2006

Fluorine-18 is among the most commonly used radionuclides for positron emission tomography (PET). This non-invasive imaging technique is capable of providing in vivo information about the distribution of radiolabeled biomolecules by 1808 coincidence detection of two simultaneously emitted photons from positron–electron annihilation. Although a number of different radiotracers have been successfully employed in PET, only a few, such as 2-[F]fluoro-2-deoxy-d-glucose (FDG) and [F]fluorodopa, have gained widespread application in nuclear medicine. The reason for this is that the regioselective introduction of F into tracer molecules is often non-specific and radiochemical yields (RCY) of the Fl…

Fluorine RadioisotopesAqueous solutionMolecular StructureInorganic chemistrySynthonRadiochemistryRegioselectivityGeneral ChemistryPeptides CyclicCatalysisPeptide FragmentsIsotopic labelingchemistry.chemical_compoundFluorideschemistryModels ChemicalYield (chemistry)Isotope LabelingMoleculeIndicators and ReagentsOrganosilicon CompoundsAcetonitrileOrganosiliconAngewandte Chemie (International ed. in English)
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18F-Labeling Using Click Cycloadditions

2014

Due to expanding applications of positron emission tomography (PET) there is a demand for developing new techniques to introduce fluorine-18 (t1/2=109.8 min). Considering that most novel PET tracers are sensitive biomolecules and that direct introduction of fluorine-18 often needs harsh conditions, the insertion of18F in those molecules poses an exceeding challenge. Two major challenges during18F-labeling are a regioselective introduction and a fast and high yielding way under mild conditions. Furthermore, attention has to be paid to functionalities, which are usually present in complex structures of the target molecule. The Cu-catalyzed azide-alkyne cycloaddition (CuAAC) and several copper…

Fluorine RadioisotopesGeneral Immunology and MicrobiologyCycloaddition ReactionStaining and LabelingComputer sciencelcsh:Rlcsh:MedicineNanotechnologyGeneral MedicineReview ArticleHigh yieldingGeneral Biochemistry Genetics and Molecular BiologyCycloadditionCatalysis18f labelingClick chemistryAnimalsClick ChemistryPet tracerCopperBioMed Research International
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Synthesis and Evaluation of Novel Ring‐Strained Noncanonical Amino Acids for Residue‐Specific Bioorthogonal Reactions in Living Cells

2021

Abstract Bioorthogonal reactions are ideally suited to selectively modify proteins in complex environments, even in vivo. Kinetics and product stability of these reactions are crucial parameters to evaluate their usefulness for specific applications. Strain promoted inverse electron demand Diels–Alder cycloadditions (SPIEDAC) between tetrazines and strained alkenes or alkynes are particularly popular, as they allow ultrafast labeling inside cells. In combination with genetic code expansion (GCE)‐a method that allows to incorporate noncanonical amino acids (ncAAs) site‐specifically into proteins in vivo. These reactions enable residue‐specific fluorophore attachment to proteins in living mam…

FluorophoreKinetics010402 general chemistry01 natural sciencesCatalysischemistry.chemical_compoundIn vivoChemical BiologyAnimalsAmino AcidsFluorescent Dyeschemistry.chemical_classificationCycloaddition ReactionFull Paper010405 organic chemistryChemistryOrganic ChemistryProteinsprotein engineeringGeneral ChemistryProtein engineeringFull PapersGenetic codelive-cell labeling0104 chemical sciencesAmino acidkineticsAlkynesclick chemistryBiophysicsClick chemistryBioorthogonal chemistryunnatural amino acidsChemistry – A European Journal
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Gold nanoclusters for ratiometric sensing of pH in extremely acidic media.

2019

AuNCs capped with β-nicotinamide adenine dinucleotide phosphate exhibit an outstanding performance as fluorescent pH sensors; specifically they exhibit a high emission in strongly acidic media and linear dependence on pH in extremely acidic media (0.6–2.7) as well as in the 7.0–9.2 pH range, while they are unresponsive at intermediate pH values. Remarkably, these AuNCs make ratiometric sensing possible in extremely acidic media with a single fluorophore, specifically the nanocluster itself.

FluorophoreMetals and AlloysGeneral ChemistryPhosphatePhotochemistryFluorescenceCatalysisSurfaces Coatings and FilmsElectronic Optical and Magnetic MaterialsNanoclusterschemistry.chemical_compoundchemistryMaterials ChemistryCeramics and CompositesPh rangeChemical communications (Cambridge, England)
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A micellar multitasking device: sensing pH windows and gauging the lipophilicity of drugs with fluorescent signals.

2010

A multitasking fluorescent device can be obtained by forming micelles of Triton X-100, containing a lipophilic macrocyclic Cu(2+) complex and the coordinating fluorophore Coumarin 343 (C343), which features a COOH moiety. At low pH the two micellised components do not interact, and the fluorescence of Courmarin 343 (C343) is intense. At intermediate pH, C343 is deprotonated and coordinates to the Cu(2+) centre in its apical position, with fluorescence quenching. At higher pH the deprotonated C343 is displaced from Cu(2+) by the formation of an OH(-) complex, and the fluorescence is revived. This allows the system to carry out its first task as it behaves as an "on-off-on" fluorescent sensor…

FluorophoreStereochemistryOctoxynolKineticsself-assembled devices010402 general chemistry01 natural sciencesMicelleCatalysisFluorescencechemistry.chemical_compoundfluorescent probesCoumarins[ CHIM.OTHE ] Chemical Sciences/OtherlipophilicityMoietyCarboxylateComputingMilieux_MISCELLANEOUSMicelles010405 organic chemistryChemistryOrganic ChemistryAnti-Inflammatory Agents Non-SteroidalAnticoagulantsWaterGeneral ChemistryHydrogen-Ion ConcentrationFluorescence0104 chemical sciencesPartition coefficientCrystallographyKineticsSpectrometry FluorescencepH windowsLipophilicity[CHIM.OTHE]Chemical Sciences/OtherChemistry (Weinheim an der Bergstrasse, Germany)
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A FRET-​based probe for fluorescence sensing of sulfide​/sulfite analytes, using a novel long-​wavelength water-​soluble 7-​hydroxycoumarin as report…

2015

International audience; A FRET-based fluorescent probe for the detection of sulfide and/or sulfite in aqueous buffer, was constructed by connecting the quencher moiety nitrobenzofurazan (7-nitro-1,2,3-benzoxadiazole, NBD) to a water-soluble 3-(2-benzimidazolyl)-7-hydroxycoumarin carboxylic acid through a piperazine linker. This probe exhibits good selectivity and high sensitivity for sulfite and sulfide over cysteine and other potential analytes. Furthermore, this is one of the few examples of fluorogenic coumarins whose solubility in water is maintained upon its conversion into reaction-based fluorescent probes.

FluorophoreSulfideCarboxylic acidInorganic chemistry[CHIM.THER]Chemical Sciences/Medicinal Chemistry010402 general chemistry01 natural sciencesBiochemistrychemistry.chemical_compoundSulfite[CHIM.ANAL]Chemical Sciences/Analytical chemistryDrug DiscoveryMoietychemistry.chemical_classification010405 organic chemistryChemistry[CHIM.ORGA]Chemical Sciences/Organic chemistryOrganic Chemistry[CHIM.CATA]Chemical Sciences/CatalysisFluorescenceCombinatorial chemistry0104 chemical sciences[CHIM.THEO]Chemical Sciences/Theoretical and/or physical chemistryFörster resonance energy transferLinker[CHIM.CHEM]Chemical Sciences/Cheminformatics
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A fluorescent molecular sensor for pH windows in traditional and polymeric biocompatible micelles: comicellization of anionic species to shift and re…

2011

A new approach is presented to obtain fluorescent sensors for pH windows that work in water and under biomimetic conditions. A single molecule that features all-covalently linked components is used, thus making it capable of working as a fluorescent sensor with an OFF/ON/OFF response to pH value. The components are a tertiary amine, a pyridine, and a fluorophore (pyrene). The forms with both protonated bases or both neutral bases quench the pyrene fluorescence, whereas the form with the neutral pyridine and protonated amine groups is fluorescent. The molecular sensor is also equipped with a long alkyl chain to make it highly hydrophobic in all its protonated and unprotonated forms, that is,…

FluorophoreTertiary aminePolymersPyridinesInorganic chemistryPhotochemistryMicelleCatalysisPolystyrene sulfonatechemistry.chemical_compoundAmphiphileAminesAlkylMicellesFluorescent Dyeschemistry.chemical_classificationPyrenesfluorescence micelles polymerization potentiometry sensorsOrganic ChemistryMolecular sensorGeneral ChemistryHydrogen-Ion ConcentrationPolyelectrolyteKineticschemistrySettore CHIM/09 - Farmaceutico Tecnologico ApplicativoHydrophobic and Hydrophilic InteractionsChemistry (Weinheim an der Bergstrasse, Germany)
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Selective derivatisation of resorcarenes: Part 7. The reason for the diastereoselectivity of Mannich reactions with chiral amines

2001

The formation of tetrakis(benzo-3,4-dihydro-1,3-oxazines) 2 by condensation of resorcarenes 1 with various primary amines and an excess of formaldehyde is not only regioselective but, in the case of (R)- or (S)-1-phenylethylamine and their para-substituted (Br, Me) derivatives, also completely diastereoselective. The reaction with the structurally similar (R)-1-aminoindane and (S)-1-(1-naphthyl)ethylamine, on the other hand, produced only a slight excess of one of the two possible epimers 2 and with (R)-1-cyclohexylethylamine no diastereoselectivity was found at all. The presence and the ratio of both diastereomeric structures can be clearly determined by NMR spectroscopy. Inspection of par…

FormaldehydeDiastereomerRegioselectivityGeneral ChemistryNuclear magnetic resonance spectroscopyMedicinal chemistryCatalysischemistry.chemical_compoundchemistryMaterials ChemistryOrganic chemistryEpimerEthylamineSingle crystalMannich reactionNew Journal of Chemistry
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Estimation of formamide harmonic and anharmonic modes in the Kohn-Sham limit using the polarization consistent basis sets.

2010

Formamide harmonic and anharmonic frequencies of fundamental vibrations in the gas phase and in several solvents were successfully estimated in the B3LYP Kohn-Sham complete basis set limit (KS CBS). CBS results were obtained by extrapolating a power function (two-parameter formula) to the results calculated with polarization-consistent basis sets. Anharmonic corrections using the second order perturbation treatment (PT2) and hybrid B3LYP functional combined with polarization consistent pc-n (n = 0, 1, 2, 3, 4) and several Pople’s basis sets were analyzed for all fundamental formamide vibrational modes in the gas phase and solution. Solvent effects were modeled within a PCM method. The anhar…

FormamideAcetonitrilesMolecular ConformationAnharmonic vibrationSolvent effectMolecular physicsCatalysisInorganic ChemistryAcetonechemistry.chemical_compoundComputational chemistryScissoringHexanesComputer SimulationDimethyl SulfoxideHarmonic vibrationPhysical and Theoretical ChemistryPhysics::Chemical PhysicsCarbon TetrachlorideBasis setQuantitative Biology::BiomoleculesOriginal PaperFormamidesOrganic ChemistryAnharmonicityWaterComplete basis set limitFormamideComputer Science ApplicationsComputational Theory and MathematicschemistryModels ChemicalMolecular vibrationHarmonicSolventsThermodynamicsFermi resonanceChloroformGasesSolvent effectsJournal of molecular modeling
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The mechanism of formamide hydrolysis in water from ab initio calculations and simulations.

2005

The neutral hydrolysis of formamide in water is a suitable reference to quantify the efficiency of proteolytic enzymes. However, experimental data for this reaction has only very recently been obtained and the kinetic constant determined experimentally is significantly higher than that predicted by previous theoretical estimations. In this work, we have investigated in detail the possible mechanisms of this reaction. Several solvent models have been considered that represent a considerable improvement on those used in previous studies. Density functional and ab initio calculations have been carried out on a system which explicitly includes the first solvation shell of the formamide molecule…

FormamideModels MolecularReaction mechanismFormamidesMolecular StructureReaction stepHydrolysisOrganic ChemistryProteolytic enzymesHydrogen BondingGeneral ChemistryReaction intermediateCrystallography X-RayCatalysischemistry.chemical_compoundSolvation shellchemistrySolvent modelsAb initio quantum chemistry methodsComputational chemistryThermodynamicsComputer SimulationChemistry (Weinheim an der Bergstrasse, Germany)
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