Search results for "Chlorophylls"

showing 10 items of 12 documents

A New Niche for Anoxygenic Phototrophs as Endoliths

2018

ABSTRACT Anoxygenic phototrophic bacteria (APBs) occur in a wide range of aquatic habitats, from hot springs to freshwater lakes and intertidal microbial mats. Here, we report the discovery of a novel niche for APBs: endoliths within marine littoral carbonates. In a study of 40 locations around Isla de Mona, Puerto Rico, and Menorca, Spain, 16S rRNA high-throughput sequencing of endolithic community DNA revealed the presence of abundant phylotypes potentially belonging to well-known APB clades. An ad hoc phylogenetic classification of these sequences enabled us to refine the assignments more stringently. Even then, all locations contained such putative APBs, often reaching a significant pro…

0301 basic medicineChloroflexi (phylum)030106 microbiologyCarbonatesFresh WaterCyanobacteriaApplied Microbiology and BiotechnologyMicrobial Ecology03 medical and health sciencescarbonateBacteria AnaerobicAlgaemicrobiomesBacterial ProteinsPhylogenetics[ SDV.MP ] Life Sciences [q-bio]/Microbiology and ParasitologyChlorophytaRNA Ribosomal 16SMicrobial matAnaerobiosisintertidalPhotosynthesisBacteriochlorophyllsPhylogenygeographygeography.geographical_feature_categoryEcologybiologyPhototrophEcologybioerosionCoral ReefsMicrobiotaBioerosionCoral reefChloroflexibiology.organism_classification[ SDV.IB.BIO ] Life Sciences [q-bio]/Bioengineering/BiomaterialsAnoxygenic photosynthesisPhototrophic ProcessesFood ScienceBiotechnology
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Combined hyperthermia and chlorophyll-based photodynamic therapy: tumour growth and metabolic microenvironment

2003

The effects of combined and simultaneously applied localised 43 degrees C hyperthermia (HT) and an antivascular bacteriochlorophyll-serine-based photodynamic therapy (Bchl-ser-PDT) on tumour growth and several microenvironmental parameters were examined. Rats bearing DS-sarcomas were allocated to treatment groups: (i) sham-treatment (control), (ii) Bchl-ser-PDT (20 mg kg(-1) i.v.), (iii) localised HT, (iv) Bchl-ser-PDT+HT. The light source used was an infrared-A irradiator, which, by use of appropriate filters, delivered the different ranges of wavelengths required. Following treatment, tumour volume was monitored. The greatest tumour growth inhibition was seen with Bchl-ser-PDT+HT, and sub…

MaleHyperthermiaCancer ResearchPathologymedicine.medical_specialtymedicine.medical_treatmentAngiogenesis InhibitorsPhotodynamic therapyOxidative phosphorylationBiologyPharmacologyRats Sprague-DawleyNeovascularizationchemistry.chemical_compoundmedicineAnimalsblood flowCombined Modality TherapyGlycolysisExperimental TherapeuticBacteriochlorophyllsPhotosensitizing AgentsNeovascularization PathologicbacteriochlorophyllHyperthermia InducedOxygenationhyperthermiamedicine.diseaseCombined Modality TherapyCell Hypoxiametabolic statusRatsPhotochemotherapyphotodynamic therapyOncologychemistryModels AnimalSarcoma ExperimentaloxygenationGrowth inhibitionmedicine.symptomCell DivisionBritish Journal of Cancer
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A STUDY ON THE POSSIBLE EFFECT OF TWO CRAYFISH SPECIES ON EPILITHIC ALGAE IN A MOUNTAIN STREAM FROM CENTRAL SPAIN

2006

The effects on epilithic algae of increasing densities of two crayfish species, Austropotamobius italicus and Pacifastacus leniusculus, the latter recently introduced in Spain, have been monitored using riverine enclosures, within a large experimental study on crayfish-macrobenthos interactions in a mountain stream. A 3-month test was carried out for each species using crayfish densities comprising between 0-5 individuals/m2 kept in 1-m2 enclosures. Epilithon was sampled periodically within the enclosures and chlorophyll a, b and c were measured by spectrophotometry. Neither statistically significant positive nor negative effects were observed on algal abundance (Chl concentrations) during …

chlorophyllslcsh:SH1-691Chlorophyll abiologyEcologyepilithonAquatic Sciencebiology.organism_classificationCrayfishPacifastacuslcsh:Aquaculture. Fisheries. Anglingchemistry.chemical_compoundPacifastacus leniusculuschemistryAlgaeAustropotamobius italicusAbundance (ecology)Animal Science and ZoologyAustropotamobius italicusMountain streamBulletin Français de la Pêche et de la Pisciculture
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Pressurized hot water extraction (PHWE) for the green recovery of bioactive compounds and steviol glycosides from Stevia rebaudiana Bertoni leaves

2018

Stevia rebaudiana Bertoni leaves are a natural source of diterpenic glycosides, and various bioactive compounds. The objectives were to characterize antioxidants and steviol glycosides in the extracts obtained from Stevia after "green" pressurized hot water extraction (PHWE). PHWE extracts were obtained at different temperatures (100, 130, 160 °C); static extraction times (5 and 10 min), and cycle numbers (1, 2, 3) using a constant pressure of 10.34 MPa. Temperature was the most important parameter for extraction, where the highest recoveries of all bioactive compounds (except for carotenoids) were at 160 °C. Extracts obtained at longer static times had more steviol glycosides, condensed ta…

Hot TemperatureSteviolChemical FractionationAntioxidantsAnalytical Chemistrychemistry.chemical_compound0404 agricultural biotechnologyGlucosidesPressureSteviaPhenolsCarotenoidchemistry.chemical_classificationChromatographyExtraction (chemistry)WaterGlycosideGreen Chemistry Technology04 agricultural and veterinary sciencesGeneral Medicine040401 food scienceGreen extraction ; Total phenolics ; Condensed tannins ; Chlorophylls/carotenoids ; Stevioside/rebaudioside APlant LeavesHot water extractionStevia rebaudianachemistryProanthocyanidinDiterpenes KauraneFood ScienceFood Chemistry
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Ultrasound-assisted green solvent extraction of high-added value compounds from microalgae Nannochloropsis spp.

2015

Abstract The aim of this work was to investigate ultrasound (US)-assisted green solvent extraction of valuable compounds from the microalgae Nannochloropsis spp. Individual green solvents (water, ethanol (EtOH), dimethyl sulfoxide (DMSO)) and binary mixture of solvents (water-DMSO and water-EtOH) were used for the extraction procedures. Maximum total phenolic compounds yield ( Y p  ≈ 0.33) was obtained after US pre-treatment ( W  = 400 W, 15 min), being almost 5-folds higher compared to that found for the untreated samples and aqueous extraction ( Y p  ≈ 0.06). The highest yield of total chlorophylls ( Y c  ≈ 0.043) was obtained after US ( W  = 400 W, 7.5 min), being more than 9-folds highe…

ChlorophyllEnvironmental Engineering[SDV.BIO]Life Sciences [q-bio]/Biotechnology[SDV]Life Sciences [q-bio]BioengineeringUltrasound assistedchemistry.chemical_compoundPhenolsMicroalgae; Nannochloropsis; Ultrasound-assisted extraction; Phenolic compounds; ChlorophyllsMicroalgae[SPI.GPROC]Engineering Sciences [physics]/Chemical and Process EngineeringDimethyl SulfoxideUltrasonicsNannochloropsisSolvent extractionWaste Management and DisposalEthanolAqueous solutionbiologyEthanolRenewable Energy Sustainability and the EnvironmentDimethyl sulfoxideExtraction (chemistry)General MedicineChlorophyllsbiology.organism_classificationPhenolic compoundsChemical engineeringchemistryYield (chemistry)Ultrasound-assisted extractionSolvents[SDV.AEN]Life Sciences [q-bio]/Food and NutritionNannochloropsisNuclear chemistryBioresource technology
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Quantum chemical simulation of excited states of chlorophylls, bacteriochlorophylls and their complexes

2006

The present review describes the use of quantum chemical methods in estimation of structures and electronic transition energies of photosynthetic pigments in vacuum, in solution and imbedded in proteins. Monomeric Mg-porphyrins, chlorophylls and bacteriochlorophylls and their solvent 1:1 and 1:2 complexes were studied. Calculations were performed for Mg-porphyrin, Mg-chlorin, Mg-bacteriochlorin, mesochlorophyll a, chlorophylls a, b, c(1), c(2), c(3), d and bacteriochlorophylls a, b, c, d, e, f, g, h, plus several homologues. Geometries were optimised with PM3, PM3/CISD, PM5, ab initio HF (6-31G*/6-311G**) and density functional B3LYP (6-31G*/6-311G**) methods. Spectroscopic transition energ…

ChlorophyllModels MolecularMolecular ConformationAb initioGeneral Physics and AstronomyElectronic structureCrystallography X-RayMolecular electronic transitionLight-harvesting complexchemistry.chemical_compoundAb initio quantum chemistry methodsComputational chemistryComputer SimulationZINDOPhysical and Theoretical ChemistryBacteriochlorophyllsbiologyChemistryChloroflexus aurantiacusProteinsbiology.organism_classificationEnergy TransferModels ChemicalQuantum TheoryPhysical chemistryBacteriochlorophyllPhys. Chem. Chem. Phys.
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Semiempirical PM5 molecular orbital study on chlorophylls and bacteriochlorophylls: Comparison of semiempirical,ab initio, and density functional res…

2003

The semiempirical PM5 method has been used to calculate fully optimized structures of magnesium-bacteriochlorin, magnesium-chlorin, magnesium-porphin, mesochlorophyll a, chlorophylls a, b, c(1), c(2), c(3), and d, and bacteriochlorophylls a, b, c, d, e, f, g, and h with all homologous structures. Hartree-Fock/6-31G* ab initio and density functional B3LYP/6-31G* methods were used to optimize structures of methyl chlorophyllide a, chlorophyll c(1), and methyl bacteriochlorophyllides a and c for comparison. Spectroscopic transition energies of the chromophores and their 1:1 or 1:2 solvent complexes were calculated with the Zindo/S CIS method. The self-consistent reaction field model was used t…

ChlorophyllModels MolecularAb initioGeneral ChemistryPorphyrinStructure-Activity RelationshipComputational Mathematicschemistry.chemical_compoundchemistryAbsorption bandComputational chemistryAtomPhysical chemistryMoleculeMagnesiumZINDOMolecular orbitalBacteriochlorophyllBacteriochlorophyllsJournal of Computational Chemistry
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Comments on the through space singlet energy transfers and energy migration (exciton) in the light harvesting systems

2008

Recent findings on the photophysical investigations of several cofacial bisporphyrin dyads for through space singlet and triplet energy transfers raised several serious questions about the mechanism of the energy transfers and energy migration in the light harvesting devices, notably LH II, in the heavily studied purple photosynthetic bacteria. The key issue is that for simple cofacial or slipped dyads with controlled geometry using rigid spacers or spacers with limited flexibilities, the fastest possible rates for singlet energy transfer for three examples are in the 10 x 10(9)s(-1) (i.e. just in the 100 ps time scale) for donor-acceptor distances approaching 3.5-3.6 A. The reported time s…

Photosynthetic reaction centreExcitonenergy migrationLight-Harvesting Protein Complexes010402 general chemistryPhotochemistry01 natural sciencesBiochemistryModels BiologicalInorganic ChemistryElectron transferchemistry.chemical_compoundBacterial Proteinslight harvesting systemsSinglet stateBacteriochlorophyllsComputingMilieux_MISCELLANEOUSexcitonenergy transferMolecular Structure010405 organic chemistryChemistrybacteriochlorophyllChromophore0104 chemical sciences[CHIM.THEO]Chemical Sciences/Theoretical and/or physical chemistryRhodopseudomonasChemical physicsPicosecond[ CHIM.THEO ] Chemical Sciences/Theoretical and/or physical chemistryThermodynamicsPhotosynthetic bacteriaBacteriochlorophyllporphyrin
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Exciton description of chlorosome to baseplate excitation energy transfer in filamentous anoxygenic phototrophs and green sulfur bacteria.

2013

A description of intra-chlorosome and from chlorosome to baseplate excitation energy transfer in green sulfur bacteria and in filamentous anoxygenic phototrophs is presented. Various shapes and sizes, single and multiwalled tubes, cylindrical spirals and lamellae of the antenna elements mimicking pigment organization in chlorosomes were generated by using molecular mechanics calculations, and the absorption, LD, and CD spectra of these were predicted by using exciton theory. Calculated absorption and LD spectra were similar for all modeled antenna structures; on the contrary, CD spectra turned out to be sensitive to the size and pigment orientations in the antenna. It was observed that, bri…

Physics::Biological PhysicsTime FactorsPhototrophbiologyChemistryExcitonChlorosomeModels Theoreticalbiology.organism_classificationMolecular physicsAnoxygenic photosynthesisSurfaces Coatings and FilmsChlorobiCrystallographyBacterial ProteinsEnergy TransferGreen sulfur bacteriaMaterials ChemistryPhysical and Theoretical ChemistryAntenna (radio)Organic ChemicalsAbsorption (electromagnetic radiation)ta116BacteriochlorophyllsExcitationThe journal of physical chemistry. B
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Ultrafast structural changes within a photosynthetic reaction centre

2021

Nature <London> / Physical science 589, 310 - 314 (2021). doi:10.1038/s41586-020-3000-7

0301 basic medicinePhotosynthetic reaction centreChlorophyllModels MolecularklorofylliCytoplasmUbiquinonePhotosynthetic Reaction Center Complex ProteinsElectrons02 engineering and technologyPhotochemistrymedicine.disease_cause530yhteyttäminenbakteeritElectron Transport03 medical and health sciencesElectron transfermedicineMoleculeddc:530BacteriochlorophyllsbioenergetiikkaComputingMilieux_MISCELLANEOUSHyphomicrobiaceaeMultidisciplinaryBinding SitesCrystallography[SDV.BBM.BS]Life Sciences [q-bio]/Biochemistry Molecular Biology/Structural Biology [q-bio.BM]ChemistryBlastochloris viridisLaserskalvot (biologia)PheophytinsBiological membraneVitamin K 2021001 nanoscience & nanotechnologyAcceptor030104 developmental biologyPicosecondFemtosecondsense organsProtons0210 nano-technologyOxidation-Reductionröntgenkristallografia
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