Search results for "Clade"

showing 10 items of 203 documents

Structural analysis of a complex nappe sequence and late-orogenic basins from the Aegean Island of Samos, Greece

1999

The island of Samos in the Aegean Sea exposes high-pressure metamorphic rocks of the Cycladic blueschist unit which are sandwiched between the mildly blueschist-facies Kerketas nappe below and the overlying non-metamorphic Kallithea nappe. Structural and metamorphic analysis shows that deformation can generally be divided into four main stages: (1) Eocene and earliest Oligocene 0ESE‐WNW-oriented nappe stacking (D1 and D2) associated with blueschist- and transitional blueschist‐ greenschist-facies metamorphism (M1 and M2). D2 caused emplacement of the blueschist unit onto the Kerketas nappe indicating that thrusting occurred during decompression. (2) A subsequent history of Oligocene and Mio…

Blueschistgeographygeography.geographical_feature_categorySubductionMetamorphic rockCYCLADESGeochemistryMetamorphismGeologyMassifNappeShear (geology)SeismologyGeologyJournal of Structural Geology
researchProduct

Morphology ofMaundiasupports its isolated phylogenetic position in the early-divergent monocot order Alismatales

2013

According to recent molecular phylogenetic data, the rare Australian endemic Maundia triglochinoides does not form a clade with taxa traditionally classified as members of Juncaginaceae. Therefore, views on the morphological evolution and taxonomy of Alismatales require re-assessment. As the morphology of Maundia is poorly known and some key features have been controversially described in the literature, the flowers, fruits, inflorescence axes and peduncles were studied using light and scanning electron microscopy. Inflorescences are bractless spikes with flowers arranged in trimerous whorls. Except in the inflorescence tip (where the flower groundplan is variable), flowers possess two tepa…

BractGynoeciumTaxonInflorescenceAlismatalesBotanyPlant ScienceBiologyAponogetonbiology.organism_classificationCladeJuncaginaceaeEcology Evolution Behavior and SystematicsBotanical Journal of the Linnean Society
researchProduct

Cyclic AMP-mediated upregulation of the expression of neuronal NO synthase in human A673 neuroepithelioma cells results in a decrease in the level of…

2004

The expression level of neuronal nitric oxide synthase (nNOS) can vary depending on the (patho)physiological conditions. Here we document a marked induction of nNOS mRNA, protein, and total NO production in response to dibutyryl cyclic AMP (db-cAMP) in human A673 neuroepithelial cells. However, the upregulation of nNOS was associated with a decreased level of production of bioactive NO and by an increase in the level of generation of reactive oxygen species (ROS). ROS production could be prevented by the NOS inhibitor L-NAME, suggesting nNOS itself is involved in ROS generation. Sepiapterin supplementation of db-cAMP-treated A673 cells could restore full bioactive NO production, most likely…

CAMP-Responsive Element ModulatorNitric Oxide Synthase Type IBiologyCREBNitric OxideBiochemistryAdenylyl cyclaseCyclic AMP Response Element Modulatorchemistry.chemical_compoundMiceNeuroblastomaCoactivatorComplement C3b Inactivator ProteinsCyclic AMPAnimalsHumansNeuroectodermal Tumors Primitive PeripheralCREB-binding proteinEnzyme InhibitorsProtein kinase AeducationCyclic AMP Response Element-Binding ProteinGTP CyclohydrolaseCAMP response element bindingHomeodomain ProteinsNeuronseducation.field_of_studyForskolinPhosphoric Diester HydrolasesIntracellular Signaling Peptides and ProteinsBlood ProteinsLIM Domain ProteinsMolecular biologyCyclic AMP-Dependent Protein KinasesPterinsUp-RegulationDNA-Binding ProteinsRepressor ProteinsAntisense Elements (Genetics)NG-Nitroarginine Methyl EsterchemistryBucladesineGene Expression RegulationComplement Factor Hbiology.proteinNitric Oxide SynthaseReactive Oxygen SpeciesSignal TransductionBiochemistry
researchProduct

From cacti to carnivores: Improved phylotranscriptomic sampling and hierarchical homology inference provide further insight into the evolution of Car…

2017

Premise of the study The Caryophyllales contain ~12,500 species and are known for their cosmopolitan distribution, convergence of trait evolution, and extreme adaptations. Some relationships within the Caryophyllales, like those of many large plant clades, remain unclear, and phylogenetic studies often recover alternative hypotheses. We explore the utility of broad and dense transcriptome sampling across the order for resolving evolutionary relationships in Caryophyllales. Methods We generated 84 transcriptomes and combined these with 224 publicly available transcriptomes to perform a phylogenomic analysis of Caryophyllales. To overcome the computational challenge of ortholog detection in s…

Cactaceae0106 biological sciences0301 basic medicineSequence HomologyInferencePlant ScienceGenes Plant010603 evolutionary biology01 natural sciencesCoalescent theoryEvolution Molecular03 medical and health sciencesSpecies SpecificityPhylogenomicsGeneticsCluster AnalysisSupermatrixCladeCluster analysisPhylogenyEcology Evolution Behavior and SystematicsModels GeneticCaryophyllalesbiologyPhylogenetic treeGenomicsSequence Analysis DNAbiology.organism_classificationBiological EvolutionCarnivoryCaryophyllales030104 developmental biologyEvolutionary biologyTranscriptomeGenome PlantAmerican Journal of Botany
researchProduct

Phosphorylation of carcinogen metabolizing enzymes: regulation of the phosphorylation status of the major phenobarbital inducible cytochromes P-450 i…

1989

We present data showing that the major phenobarbital inducible cytochromes P-450 (cytochrome P-450IIB1 and cytochrome P-450IIB2) were phosphorylated in intact hepatocytes. This phosphorylation was greatly increased by the cAMP derivatives N6-dibutyryl-cAMP and 8-thiomethyl-cAMP mediated by a cAMP-dependent protein kinase. Most importantly the phosphorylation status of cytochromes P-450 was shown to change in the hepatocytes after treatment with glucagon, which is known to increase the level of cAMP in hepatocytes. The observed impact of the hormone glucagon on the phosphorylation of distinct cytochrome P-450 forms in intact hepatocytes reveals the possibility that the enzyme activity of cyt…

Cancer ResearchCytochromeBlotting WesternGlucagonMixed Function OxygenasesCytochrome P-450 Enzyme SystemCyclic AMPmedicineAnimalsPhosphorylationEnzyme inducerProtein kinase AbiologyChemistryCytochrome P450General MedicineThionucleotidesGlucagonRatsmedicine.anatomical_structureBucladesineLiverBiochemistryPhenobarbitalHepatocytebiology.proteinPhosphorylationElectrophoresis Polyacrylamide GelPhenobarbitalmedicine.drugCarcinogenesis
researchProduct

Towards a new classification of Salvia s.l.: (re)establishing the genus Pleudia Raf.

2015

Salvia L. In its traditional circumscription is the largest genus within the mint family. To date, the magnitude of the task has rendered it difficult to provide a genus-wide revision based on morphological data. Current molecular investigations based on a dense taxon sampling representing the whole phenotypic diversity and distribution range of Salvia confirmed that the genus is polyphyletic. Salvia species fall in 4 distinct clades, although all of them, except Clade IV, also include non-Salvia genera. A taxonomic revision is thus urgently needed with two different approaches that have to be considered: (1) to include the 5 morphologically distinct non-Salvia genera in Salvia or (2) to sp…

Character evolutionbiologyRange (biology)Species distributionPlant ScienceSalviabiology.organism_classificationfood.foodfoodGenusPolyphylyBotanyMint familyPleudia Raf.Salvia aegyptiaca-groupSalvia sects. Notiosphace Benth. and Eremosphace BungephylogenyNorth AfricaSouthwest AsiaClade
researchProduct

Phylogeny of long-tailed tits and allies inferred from mitochondrial and nuclear markers (Aves: Passeriformes, Aegithalidae)

2010

Abstract In this paper we provide a molecular phylogeny based on three mitochondrial and three nuclear markers for all long-tailed tit species of the genus Aegithalos including several doubtful subspecies (17 taxa) plus three close allies of SE Asian Leptopoecile and North American Psaltriparus . Genus Aegithalos is divided into three major clades, two of them showing only minor differentiation. Separation of two mitchondrial haploytpe clusters in the N Palearctic Long-tailed Tit, Ae. caudatus , was dated back to the Late Pleistocene, however, descendants from both lineages underwent a rapid post-Pleistocene range expansion and largely mixed over the entire distribution area. The Chinese po…

ChinaRange (biology)ZoologyBiologySubspeciesDNA MitochondrialEvolution MolecularGeneticsAnimalsPasseriformesCladeMolecular BiologyPhylogenyEcology Evolution Behavior and SystematicsCell NucleusGeographyModels GeneticLeptopoecileAegithalidaeEcologySequence Analysis DNAAegithalosbiology.organism_classificationTaxonHaplotypesNorth AmericaMolecular phylogeneticsMolecular Phylogenetics and Evolution
researchProduct

Aryl hydrocarbon receptor activation by cAMP vs. dioxin: divergent signaling pathways.

2005

Even before the first vertebrates appeared on our planet, the aryl hydrocarbon receptor ( AHR ) gene was present to carry out one or more critical life functions. The vertebrate AHR then evolved to take on functions of detecting and responding to certain classes of environmental toxicants. These environmental pollutants include polycyclic aromatic hydrocarbons (e.g., benzo[ a ]pyrene), polyhalogenated hydrocarbons, dibenzofurans, and the most potent small-molecular-weight toxicant known, 2,3,7,8-tetrachlorodibenzo- p -dioxin (TCDD or dioxin). After binding of these ligands, the activated AHR translocates rapidly from the cytosol to the nucleus, where it forms a heterodimer with aryl hydroc…

Conservation of Natural ResourcesAryl hydrocarbon receptor nuclear translocatorPolychlorinated DibenzodioxinsTime FactorsTranscription GeneticGenetic VectorsGreen Fluorescent ProteinsImmunoblottingActive Transport Cell NucleusEnvironmentDioxinsLigandschemistry.chemical_compoundMiceCytosolGenes ReporterCell Line TumorCyclic AMPAnimalsImmunoprecipitationReceptorFluorescent Antibody Technique IndirectCell NucleusMultidisciplinarybiologyChemistryColforsinEndogenous mediatorrespiratory systemBiological SciencesAryl hydrocarbon receptorCyclic AMP-Dependent Protein KinasesCytosolProtein TransportBiochemistryBucladesineMicroscopy FluorescenceReceptors Aryl HydrocarbonSecond messenger systembiology.proteinProstaglandinsEnvironmental PollutantsSignal transductionDimerizationToxicantPlasmidsProtein BindingSignal TransductionProceedings of the National Academy of Sciences of the United States of America
researchProduct

Crocidura cossyrensis Contoli, 1989 (Mammalia, Soricidae): karyotype, biochemical genetics and hybridization experiments

2004

The shrew Crocidura cossyrensis Contoli, 1989 from Pantelleria (I), a Mediterranean island 100 km south of Sicily and 70 km west from Tunisia, was investigated in order to understand its origin and its relationship with C. russula from Tunisia, Morocco and Switzerland. With the exception of a single heterozygote centric fusion, C. cossyrensis had a karyotype identical with that of C. russula from Tunisia (2N = 42, NF = 70 to 72), but it differed from C. russula from Morocco and Switzerland (2N = 42, NF = 60). The former have 5-6 pairs of chromosomes with small arms that are acrocentric in the latter. Genetic comparisons with allozyme data revealed small genetic distance (0.04) between C. co…

CrociduraTunisiaChromosomes; Crocidura; Hybrids; Pantelleria; Phylogeography; Soricidae; TunisiabiologyShrewSettore BIO/05 - ZoologiaZoologyKaryotypeChromosomebiology.organism_classificationHybridRussulaPhylogeographyTaxonGenetic distanceCrocidurabiology.animalSoricidaeCladePantelleriaEcology Evolution Behavior and SystematicsHybridRevue suisse de zoologie.
researchProduct

Influence of dibutyryl cyclic AMP on thymidine uptake by herpes simplex virus infected cells and the intracellular level of cyclic AMP.

1977

Abstract Dibutyryl cyclic AMP inhibits the increase of dThd and BrdUrd transport normally observed after infection with Herpesvirus hominis, type I and II. Incorporation is also reduced. Inhibition of uptake is non-competitive as analysed by the Lineweaver-Burk plot. Addition of this drug to infected cells also reduces the activity of the thymidine kinase (EC 2.7.1.75). Transport of dUrd, dCyd and dAdo is not reduced. 4–8 h after infection with thymidine kinase (+) herpes strains the level of cAMP increases. On infection with a thymidine kinase (−) virus, only a small elevation of cAMP can be shown. It was also found that early addition of actinomycin D or of cycloheximide prevents the incr…

DNA ReplicationUltraviolet RaysDeoxyribonucleosidesBiologyCycloheximidemedicine.disease_causeVirus ReplicationBiochemistry Genetics and Molecular Biology (miscellaneous)Thymidine KinaseVirusCell Linechemistry.chemical_compoundSpecies SpecificitymedicineCyclic AMPSimplexvirusThymine NucleotidesCycloheximideDadoBiological TransportDibutyryl Cyclic AMPMolecular biologyKineticsHerpes simplex viruschemistryBromodeoxyuridineBucladesineThymidine kinaseDNA ViralDactinomycinThymidineIntracellularThymidineBiochimica et biophysica acta
researchProduct