Search results for "Classification"

showing 10 items of 29475 documents

Synthesis, NMR spectral and structural studies on mixed ligand complexes of Pd(II) dithiocarbamates: First structural report on palladium(II) dithioc…

2016

Abstract Three new mixed ligand complexes of palladium(II) dithiocarbamates; [Pd(4-dpmpzdtc)(PPh3)(SCN)] (1), [Pd(4-dpmpzdtc)(PPh3)Cl] (2) and [Pd(bzbudtc)(PPh3)Cl] (3), (where, 4-dpmpzdtc = 4-(diphenylmethyl)piperazinecarbodithioato anion, bzbudtc = N-benzyl-N-butyldithiocarbamato anion and PPh3 = triphenylphosphine) have been synthesized from their respective parent dithiocarbamates by ligand exchange reactions and characterized by IR and NMR (1H, 13C and 31P) spectroscopy. IR and NMR spectral data support the isobidentate coordination of the dithiocarbamate ligands in all complexes (1–3) in solid and in solution, respectively. Single crystal diffraction analysis of complexes 1–3 evidence…

palladium(II)synthesisStereochemistrychemistry.chemical_element010402 general chemistry01 natural sciencesSingle Crystal DiffractionAnalytical ChemistryIonInorganic Chemistryligand exchange reactionsDithiocarbamateSpectral dataSpectroscopyta116Spectroscopysingle crystal X-ray diffractionchemistry.chemical_classification010405 organic chemistryChemistryLigandOrganic ChemistryMixed ligandNMR0104 chemical sciencesCrystallographyPalladiumJournal of Molecular Structure
researchProduct

Evolutionary Dynamics of Pathoadaptation Revealed by Three Independent Acquisitions of the VirB/D4 Type IV Secretion System in Bartonella

2017

The α-proteobacterial genus Bartonella comprises a group of ubiquitous mammalian pathogens that are studied as a model for the evolution of bacterial pathogenesis. Vast abundance of two particular phylogenetic lineages of Bartonella had been linked to enhanced host adaptability enabled by lineage-specific acquisition of a VirB/D4 type IV secretion system (T4SS) and parallel evolution of complex effector repertoires. However, the limited availability of genome sequences from one of those lineages as well as other, remote branches of Bartonella has so far hampered comprehensive understanding of how the VirB/D4 T4SS and its effectors called Beps have shaped Bartonella evolution. Here, we repor…

parallel evolution0301 basic medicineBartonellaAMPylation; bacterial effector; filamentation induced by cAMP; parallel evolutionVirulence FactorsIn silico030106 microbiologyBiologyfilamentation induced by cAMPGenomeEvolution MolecularType IV Secretion Systems03 medical and health sciencesBacterial ProteinsBartonella InfectionsGeneticsAMPylationHumansEvolutionary dynamicsBacterial Secretion SystemsPhylogenyEcology Evolution Behavior and SystematicsPhylogenetic treeEffectorbiology.organism_classificationbacterial effectorVirology030104 developmental biologyEvolutionary biologyFilamentation induced by cAMP; AMPylation; Parallel evolution; Bacterial effectorHost-Pathogen InteractionsParallel evolutionAdaptationBartonellaResearch Article
researchProduct

Experimental evolution of an RNA virus in cells with innate immunity defects

2015

Experimental evolution studies have shown that RNA viruses respond rapidly to directional selection and thus can adapt efficiently to changes in host cell tropism, antiviral drugs, or other imposed selective pressures. However, the evolution of RNA viruses under relaxed selection has been less extensively explored. Here, we evolved vesicular stomatitis virus in mouse embryonic fibroblasts knocked-out for PKR, a protein with a central role in antiviral innate immunity. Vesicular stomatitis virus adapted to PKR-negative mouse embryonic fibroblasts in a gene-specific manner, since the evolved viruses exhibited little or no fitness improvement in PKR-positive cells. Full-length sequencing revea…

parallel evolutionepistasisvirusesMutagenesis (molecular biology technique)Microbiology03 medical and health sciencesVirologyexperimental evolutionTropismattenuation030304 developmental biologyGenetics0303 health sciencesExperimental evolutionInnate immune systembiology030306 microbiology030302 biochemistry & molecular biologyRNARNA virusPKRbiology.organism_classificationVesicular stomatitis virusViral evolutionvesicular stomatitis virusCorrigendumResearch ArticleVirus Evolution
researchProduct

Evidence for Positive Selection in the Capsid Protein-Coding Region of the Foot-and-Mouth Disease Virus (FMDV) Subjected to Experimental Passage Regi…

2001

We present sequence data from two genomic regions of foot-and-mouth disease virus (FMDV) subjected to several experimental passage regimens. Maximum-likelihood estimates of the nonsynonymous-to-synonymous rate ratio parameter (dN/dS) suggested the action of positive selection on some antigenic sites of the FMDV capsid during some experimental passages. These antigenic sites showed an accumulation of convergent amino acid replacements during massive serial cytolytic passages and also in persistent infections of FMDV in cell culture. This accumulation was most significant at the antigenic site A (the G-H loop of capsid VP1), which includes an Arg-Gly-Asp (RGD) cellular recognition motif. Our …

parallel evolutionmedicine.drug_class[SDV]Life Sciences [q-bio]virusesMolecular Sequence DataPopulationMonoclonal antibodyVirusEvolution Molecular03 medical and health sciencesAphthovirusCapsidAntigenpositive selectionGeneticsmedicineCoding regionSelection GeneticSerial Passageconvergent evolutioneducationMolecular BiologyPhylogenyEcology Evolution Behavior and Systematics030304 developmental biologychemistry.chemical_classification0303 health scienceseducation.field_of_studyModels GeneticbiologyFoot-and-mouth disease virusfoot-and-mouth disease virusexperimental phylogeny030306 microbiologyParallel evolutionbiochemical phenomena metabolism and nutritionbiology.organism_classificationVirology3. Good healthAmino acidPositive selection[SDV] Life Sciences [q-bio]CapsidchemistryFoot-and-mouth disease virusExperimental phylogenyConvergent evolutionMolecular Biology and Evolution
researchProduct

MILKER’S NODULE. A PERPLEXING FARMYARD INFECTION AND THREAT TO THE IMMUNOCOMPROMISED

2017

Milker’s nodules, also called paravaccinia, is a DNA virus transmitted from infected cows to humans. It results from contact with cattle, cattle byproducts, or fomites. Classified as an occupational disorder, those at risk of exposure include farmers, butchers, and agricultural tourists. The viral infection begins 5—15 days after inoculation as an erythematous-purple, round nodule with a clear depressed center, and a surrounding erythematous ring. While familiar to those in farming communities, the presence of the nodule may be concerning to others, particularly the immunosuppressed. Milker’s nodules are selflimited in immunocompetent individuals and heal without scarring within 8 weeks. An…

paravacciniaoccupational infectionmilker’s noduleDiseaseVirusparapoxviruszoonotic diseasegraft-versus-host diseaselcsh:Dermatologymedicineanimal to humanErythema multiformehematopoietic stem cell transplantorfimmunosuppressedpsuedocowpoxvirusbiologybusiness.industryerythema multiformeCancerNodule (medicine)lcsh:RL1-803farmyard poxmedicine.diseasebiology.organism_classificationVirologyGraft-versus-host diseasepoxvirusParapoxvirusMilker's nodulemedicine.symptombusinessVestnik dermatologii i venerologii
researchProduct

When earwig mothers do not care to share: Parent–offspring competition and the evolution of family life

2017

Kin competition often reduces – and sometimes entirely negates – the benefits of cooperation among family members. Surprisingly, the impact of kin competition on the fitness effects of family life only received close scrutiny in studies on sibling rivalry, whereas the possibility of parent–offspring competition has attracted much less attention. As a consequence, it remains unclear whether and how parent–offspring competition could have affected the early evolution of parental care and family life. Here, we examined the occurrence and consequences of parent–offspring competition over food access in the European earwig Forficula auricularia, an insect with facultative family life reminiscent…

parent-offspring competition0106 biological sciences0301 basic medicineSibling rivalry (animals)Offspringmedia_common.quotation_subjectparental careparent-offspring conflict.010603 evolutionary biology01 natural sciencesCompetition (biology)03 medical and health sciencesForficula auriculariaEuropean earwigkin competitionorphaningEcology Evolution Behavior and Systematicsmedia_commonbiologyEcologybiology.organism_classificationFamily lifeenvironmental conditions[SDV.BA.ZI]Life Sciences [q-bio]/Animal biology/Invertebrate Zoology030104 developmental biologyEarwigfamily lifeParent–offspring conflictPaternal careDemographyFunctional Ecology
researchProduct

Gravity-derived Moho map for Latvia

2020

A precise understanding of crustal structure is essential to the fields of geodynamics, seismology and certain branches of geophysics. A boundary between the crust and the mantle is known as the MohoroviÄiÄ discontinuity, simply referred to as the âMohoâ. Moho geometry and depth have been extensively studied in Europe, but there are still regions with little information about it. One such area is the northern Baltics, Latvia in particular. So far, only one seismic refraction profile, spanning from Sovetsk (Kaliningrad) to Kohtla-Järve (Estonia), has been used to study the deep structure of the Earth in Latvia. We propose gravity inversion (ParkerâOldenburg algorithm) to gain more insight i…

parker–oldenburg inversionGravity (chemistry)biologyMoholcsh:QE1-996.5mohorovičić discontinuitylatviaGeodesybiology.organism_classificationcrustal thickness.lcsh:Geologygravity dataGeneral Earth and Planetary SciencesGeologyWater Science and TechnologyEstonian Journal of Earth Sciences
researchProduct

Image classification based on 2D feature motifs

2013

The classification of raw data often involves the problem of selecting the appropriate set of features to represent the input data. In general, various features can be extracted from the input dataset, but only some of them are actually relevant for the classification process. Since relevant features are often unknown in real-world problems, many candidate features are usually introduced. This degrades both the speed and the predictive accuracy of the classifier due to the presence of redundancy in the candidate feature set. In this paper, we study the capability of a special class of motifs previously introduced in the literature, i.e. 2D irredundant motifs, when they are exploited as feat…

pattern discoveryContextual image classificationProbabilistic latent semantic analysisExploitComputer sciencebusiness.industryScale-invariant feature transformPattern recognitioncomputer.software_genreDigital imageComputingMethodologies_PATTERNRECOGNITIONclassificationimage analysisVisual WordArtificial intelligenceData miningbusinessClassifier (UML)computerImage compression
researchProduct

Production and Characterization of Medium-Sized and Short Antioxidant Peptides from Soy Flour-Simulated Gastrointestinal Hydrolysate.

2021

Soybeans (Glycine max) are an excellent source of dietary proteins and peptides with potential biological activities, such as antihypertensive, anti-cholesterol, and antioxidant activity

peptidomicAntioxidantPhysiologymedicine.medical_treatmentClinical BiochemistryeducationPeptideRM1-950Fractionationantioxidative activity; bioactive peptides; mass spectrometry; peptidomics; soybean01 natural sciencesBiochemistryHydrolysateArticle0404 agricultural biotechnologymedicineDatabase search enginesoybeanMolecular Biologymass spectrometrychemistry.chemical_classification010401 analytical chemistryantioxidative activitypeptidomicsfood and beverages04 agricultural and veterinary sciencesCell Biology040401 food sciencehumanities0104 chemical sciencesAmino acidBiochemistrychemistrybioactive peptideGlycineTherapeutics. Pharmacologybioactive peptidesSoy flourAntioxidants (Basel, Switzerland)
researchProduct

Isolation of Four Lytic Phages Infecting Klebsiella pneumoniae K22 Clinical Isolates from Spain

2020

This article belongs to the Special Issue Bacteriophage—Molecular Studies.

phage therapyPhage therapyPhage therapyKlebsiella pneumoniae<i>Klebsiella pneumoniae</i>medicine.medical_treatmentGenome ViralArticleHost SpecificityCatalysisMicrobiologylcsh:ChemistryInorganic ChemistryBacteriophageViral Proteins03 medical and health sciencesPodoviridaeProtein DomainsbacteriophagemedicineHumansBacteriophagesTypingPhysical and Theoretical ChemistryBacteriophagelcsh:QH301-705.5Molecular BiologyPhylogenySpectroscopy030304 developmental biologyWhole genome sequencingInfectivityLikelihood Functions0303 health sciencesbiology030306 microbiologyOrganic ChemistryGeneral Medicinebiology.organism_classification3. Good healthComputer Science ApplicationsKlebsiella pneumoniaelcsh:Biology (General)lcsh:QD1-999Lytic cycleSpainInternational Journal of Molecular Sciences
researchProduct