Search results for "Clones"
showing 10 items of 21 documents
Variation in gene expression within clones of the earthworm Dendrobaena octaedra
2017
Gene expression is highly plastic, which can help organisms to both acclimate and adapt to changing environments. Possible variation in gene expression among individuals with the same genotype (among clones) is not widely considered, even though it could impact the results of studies that focus on gene expression phenotypes, for example studies using clonal lines. We examined the extent of within and between clone variation in gene expression in the earthworm Dendrobaena octaedra, which reproduces through apomictic parthenogenesis. Five microsatellite markers were developed and used to confirm that offspring are genetic clones of their parent. After that, expression of 12 genes was measured…
Global emergence of the widespread Pseudomonas aeruginosa ST235 clone
2018
Abstract Objectives Despite the non-clonal epidemic population structure of Pseudomonas aeruginosa , several multi-locus sequence types are distributed worldwide and are frequently associated with epidemics where multidrug resistance confounds treatment. ST235 is the most prevalent of these widespread clones. In this study we aimed to understand the origin of ST235 and the molecular basis for its success. Methods The genomes of 79 P. aeruginosa ST235 isolates collected worldwide over a 27-year period were examined. A phylogenetic network was built, using a Bayesian approach to find the Most Recent Common Ancestor, and we identified antibiotic resistance determinants and ST235-specific genes…
The Effects of Orography on the Extratropical Transition of Tropical Cyclones: A Case Study of Typhoon Sinlaku (2008)
2018
Abstract Extratropical transition (ET) can cause high-impact weather in midlatitude regions and therefore constitutes an ongoing threat at the end of a tropical cyclone’s (TC) life cycle. Most of the ET events occur over the ocean, but some TCs recurve and undergo ET along coastal regions; however, the latter category is less investigated. Typhoon Sinlaku (2008), for example, underwent ET along the southern coast of Japan. It was one of the typhoons that occurred during the T-PARC field campaign, providing unprecedented high-resolution observational data. Sinlaku is therefore an excellent case to investigate the impact of a coastal region, and in particular orography, on the evolution of ET…
Regionalizing Rainfall at Very High Resolution over La Réunion Island: A Case Study for Tropical Cyclone Ando
2016
AbstractEnsemble simulations of Tropical Cyclone (TC) Ando (31 December 2000–9 January 2001) are performed over the southwest Indian Ocean using the nonhydrostatic WRF Model. Nested domains centered over the island of La Réunion allow for the simulation of local rainfall amounts associated with TC Ando at very high resolution (680-m grid spacing). The model is forced by and nudged toward ERA-Interim during the first (1–6) day(s) of the TC’s life cycle. The nudging ends at various dates to constrain either the whole life cycle or only parts of it.As expected, results show weakened member dispersion, as the relaxation lasts longer, with more members producing similar cyclone tracks and intens…
L'activité dépressionnaire et anticyclonique hivernale des moyennes latitudes du Pacifique Nord
2007
Using a new automated scheme, synoptic mid-latitudes cyclone and anticyclone trajectories have been constructed over the North Pacific from daily sea level pressure (SLP) data, covering the period 1950-2001. Over the North-Eastern Pacific, the strength of anticyclones diminished and their frequency became more variable, while cyclones intensified and presented further southerly trajectories since the mid-1970s. Thus, cyclonic and anticyclonic activities are significantly anti-correlated. These transient activity changes averaged out into anomalously low winter mean SLP in the Aleutian Low region, consistent with the positive phase of the North Pacific Oscillation, inducing positive sea surf…
Land area fractions and population fractions exposed to extreme climate impact events derived from ISIMIP2b output data
2020
This dataset contains the land area fractions and population fractions exposed ('le' for land exposed and 'pe' for population exposed) to the following six extreme climate impact events: crop failures (lec/pec), drought (led/ped), heatwaves (leh/peh), river floods (ler/per), tropical cyclones (let/pet) and wildfire (lew/pew). It is the data behind Lange et al., 2020. The data are provided on a global 0.5° grid and in annual time steps. It was derived from multi-model climate impacts simulations generated within the second round (ISIMIP2b, https://www.isimip.org/protocol/2b, Frieler et al., 2017) of the Intersectoral Impact Model Intercomparison Project (ISIMIP, https://www.isimip.org). The …
Werewolves and warning signs: Cultural responses to tropical cyclones in Mauritius
2022
The role that culture plays in the way different groups experience, respond to, and recover from disasters has been widely discussed. Yet, while there is a considerable (and growing) literature of case study evidence for the need to account for culture in disasters, comparatively few studies take a long-term perspective on cultural interactions with disasters, resulting in a lack of exploration into the diachronic nature of these cultural responses, both past and present. The literature that does exist tends also to focus either on western cultures or on groups that pursue highly traditional livelihoods. Communities that call on elements of both local or vernacular knowledge and scientific …
M-arte. La colonia e i cloni
2022
A few examples of artistic activity in space exploration are reported and hypotheses are made as to what a museum on another planet would be like. Considerations are also made about the value of the original piece of art today.
Global Distribution of Shigella sonnei Clones
2011
To investigate global epidemiology of Shigella sonnei, we performed multilocus variable number tandem repeat analysis of 1,672 isolates obtained since 1943 from 50 countries on 5 continents and the Pacific region. Three major clonal groups were identified; 2 were globally spread. Type 18 and its derivatives have circulated worldwide in recent decades.
Characterization of Listeria monocytogenes isolates from human listeriosis cases in Italy.
2009
ABSTRACT The objective of this study was to characterize by serotyping, pulsed-field gel electrophoresis (PFGE), and PCR amplification of virulence genes and markers of epidemic clones I, II, and III (ECI, ECII, and ECIII) 54 human isolates from apparently sporadic cases of infection occurring in the Lombardy region and in the province of Florence, Tuscany, Italy, in the years 1996 to 2007. Listeria monocytogenes isolates were provided by the clinical microbiology laboratories of the Lombardy region and the “Careggi” Hospital of Florence, Tuscany, Italy. Serotyping, PFGE after digestion with the AscI and ApaI enzymes, and PCR amplification for the inlA , inlC , and inlJ genes and ECI, ECII,…