Search results for "Cloning"

showing 10 items of 498 documents

Increased expression of the potential proapoptotic molecule DD2 and increased synthesis of leukotriene B4 during allograft rejection in a marine spon…

2000

Sponges (Porifera) are a classical model to study the events during tissue transplantation. Applying the 'insertion technique' autografts from the marine sponge Geodia cydonium fuse within 5 days. In contrast, allografts are rejected and destroyed. Here we show that during allograft rejection the cells in the grafts undergo apoptosis; 5 days after transplantation 46% of the cells show signs of apoptosis. In a previous study it was shown that during this process a tumor necrosis factor-like molecule is induced in allo- and xenografts. Molecules grouped to the superfamily of tumor necrosis factor receptors and a series of associated adapter molecules contain the characteristic death domain. T…

Graft RejectionLeukotriene B4Molecular Sequence DataGene ExpressionApoptosisLeukotriene B4Transplantation Autologouschemistry.chemical_compoundDownregulation and upregulationGene expressionAnimalsHumansTransplantation HomologousAmino Acid SequenceCloning MolecularReceptorMolecular BiologyDeath domainSequence Homology Amino AcidChemistryCell BiologyMolecular biologyPoriferaTransplantationAlcohol Oxidoreductasessurgical procedures operativeApoptosisTumor necrosis factor alphaPeptidesCell Death & Differentiation
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Translation of hepatitis B virus (HBV) surface proteins from the HBV pregenome and precore RNAs in Semliki Forest virus-driven expression.

2004

Hepatitis B virus (HBV) pregenome RNA (pgRNA) serves as a translation template for the HBV core (HBc) protein and viral polymerase (Pol). HBV precore RNA (pcRNA) directs the synthesis of the precore (preC) protein, a precursor of the hepatitis B e antigen (HBeAg). pgRNA and pcRNA were expressed in the Semliki Forest virus (SFV) expression system. Besides the HBc and preC proteins, there was revealed the synthesis of all three forms of HBV surface (HBs) proteins: long (LHBs), middle (MHBs) and short (SHBs), the start codons of which are located more than 1000 nt downstream of the HBc and preC start codons. Moreover, other HBV templates, such as 3′-truncated pgRNA lacking 3′ direct repeat and…

HBV RNA encapsidation signal epsilonHepatitis B virusvirusesGene ExpressionLeaky scanningDNA-Directed DNA Polymerasemedicine.disease_causeSemliki Forest virusVirus ReplicationCell LineViral Envelope ProteinsVirologymedicineAnimalsHepatitis B e AntigensRNA MessengerCloning MolecularProtein PrecursorsHepatitis B virusHepatitis B Surface Antigensbiologyvirus diseasesRNA virusTemplates Geneticbiology.organism_classificationVirologyMolecular biologyHepatitis B Core AntigensImmunohistochemistrySemliki forest virusdigestive system diseasesGenetic translationHBeAgHepadnaviridaeProtein BiosynthesisRNA ViralThe Journal of general virology
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Deletions in the hepatitis B virus small envelope protein: effect on assembly and secretion of surface antigen particles

1992

The small envelope S protein of hepatitis B virus carrying the surface antigen has the unique property of mobilizing cellular lipids into empty envelope particles which are secreted from mammalian cells. We studied the biogenesis of such particles using site-directed mutagenesis. In this study, we describe the effect of deletions in the N-terminal hydrophobic and hydrophilic domains of the S protein. Whereas short overlapping deletions of hydrophilic sequences flanking the first hydrophobic domain were tolerated, larger deletions of the same sequences were not. Conversely, the hydrophilic region preceding the second hydrophobic domain was not permissive for even short deletions. Deletion of…

Hepatitis B virusMolecular Sequence DataImmunologyMutantMutagenesis (molecular biology technique)Biologymedicine.disease_causeMicrobiologyViral Envelope ProteinsViral envelopeVirologymedicineInterleukin 9SecretionCloning MolecularCells CulturedSecretory pathwayMutationHepatitis B Surface AntigensBase SequenceTunicamycinEndoplasmic reticulumPrecipitin TestsMolecular biologyInsect ScienceMutagenesis Site-DirectedChromosome DeletionPlasmidsResearch ArticleJournal of Virology
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Mosaic particles formed by wild-type hepatitis B virus core protein and its deletion variants consist of both homo- and heterodimers.

2003

AbstractCo-expression in Escherichia coli of wild-type (wt) hepatitis B virus core protein (HBc) and its naturally occurring variants with deletions at amino acid positions 77–93 or 86–93 leads to formation of mosaic particles, which consist of three dimer subunit compositions. These compositions are wt/variant HBc heterodimers and two types of homodimers, formed by wt HBc or the variant HBc themselves. Mosaic particles were found also when both HBc deletion variants 77–93 and 86–93 were co-expressed in E. coli. These findings are discussed in terms of their significance for hepatitis B virus pathogenesis and prospective use of mosaic particles in vaccine development.

Hepatitis B virusvirusesProtein subunitDimerBiophysicsExpressionPlasma protein bindingBiologymedicine.disease_causeMosaic particlesBiochemistrychemistry.chemical_compoundHepatitis B virus core proteinProtein structureStructural Biologyparasitic diseasesGeneticsmedicineHepatitis B VaccinesCloning MolecularProtein Structure QuaternaryMolecular BiologyEscherichia coliSequence Deletionchemistry.chemical_classificationHepatitis B virusViral Core ProteinsWild typevirus diseasesGenetic VariationCell BiologyHepatitis BDimer formationVirologyMolecular biologydigestive system diseasesAmino acidProtein SubunitschemistryDimerizationProtein BindingFEBS letters
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Gypsy homologous sequences in Drosophila subobscura (gypsyDS).

1993

Characterization of sequences homologous to the Drosophila melanogaster gypsy transposable element was carried out in Drosophila subobscura (gypsyDS). They were found to be widely distributed among natural populations of this species. From Southern blot and in situ analyses, these sequences appear to be mobile in this species. GypsyDS sequences are located in both euchromatic and heterochromatic regions. A complete gypsyDS sequence was isolated from a D. subobscura genomic library, and a 1.3-kb fragment which aligns with the ORF2 of the D. melanogaster gypsy element was sequenced. Comparisons of this sequence in three species (D. subobscura, D. melanogaster, and D. virilis) indicate that th…

HeterochromatinMolecular Sequence DataTransfectionHomology (biology)Species SpecificityMolecular evolutionDrosophilidaeSequence Homology Nucleic AcidGeneticsMelanogasterAnimalsAmino Acid SequenceCloning MolecularMolecular BiologyEcology Evolution Behavior and SystematicsSouthern blotGeneticsbiologyBase SequenceSequence Homology Amino AcidNucleic acid sequenceChromosome MappingDNAbiology.organism_classificationBiological EvolutionDrosophila subobscuraDrosophila melanogasterDNA Transposable ElementsDrosophilaJournal of molecular evolution
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RCS1, a gene involved in controlling cell size inSaccharomyces cerevisiae

1991

Cloning and sequencing of RCS1, Saccharomyces cerevisiae gene whose product seems to be involved in timing the budding event of the cell cycle, is described. A haploid strain in which the 3'-terminal region of the chromosomal copy of the gene has been disrupted produces cells that are, on average, twice the size of cells of the parental strain. The critical size for budding in the mutant is similarly increased, and the disruption mutation is dominant in a diploid heterozygous for the RCS1 gene. Spores from this diploid have a reduced ability to germinate, the effect being more pronounced in the spores carrying the disrupted copy of RCS1. However, disrupted cells recover from alpha-factor tr…

HeterozygoteMolecular Sequence DataSaccharomyces cerevisiaeMutantBioengineeringSaccharomyces cerevisiaemedicine.disease_causeApplied Microbiology and BiotechnologyBiochemistryGeneticsSpore germinationmedicineAmino Acid SequenceCloning MolecularDNA FungalGeneGene LibraryGeneticsBuddingMutationMembrane GlycoproteinsBase SequencebiologyCell CyclefungiSpores Fungalbiology.organism_classificationYeastMutationPloidyPlasmidsBiotechnologyYeast
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Sequence, evolution and tissue expression patterns of an epidermal type I keratin from the shark Scyliorhinus stellaris.

2004

From the shark Scyliorhinus stellaris we cloned and sequenced a cDNA encoding a novel type I keratin, termed SstK10. By MALDI-MS peptide mass fingerprinting of cytoskeletal proteins separated on polyacrylamide gels, we assigned SstK10 to a 46-kDa protein which is the major epidermal type I (“IE”) keratin in this fish and is specifically expressed in stratified epithelia. In a phylogenetic tree based on type I keratin sequences and with lamprey keratins applied as outgroup, SstK10 branches off in a rather basal position. This tree strongly supports the concept that teleost keratins and tetrapod keratins resulted from two independent gene radiation processes. The only exception is human K18 b…

HistologyDNA ComplementaryType I keratinMolecular Sequence Datamacromolecular substancesMass SpectrometryPathology and Forensic MedicineSequence Analysis Proteinbiology.animalKeratinAnimalsAmino Acid SequenceCloning MolecularPhylogenychemistry.chemical_classificationintegumentary systemPhylogenetic treebiologyLampreyVertebrateCell BiologyGeneral MedicineGnathostomataKeratin 6AAnatomybiology.organism_classificationImmunohistochemistryCell biologychemistryEpidermal CellsGene Expression RegulationOrgan SpecificitySharksKeratinsElectrophoresis Polyacrylamide GelEpidermisScyliorhinus stellarisEuropean journal of cell biology
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Origin of neuronal-like receptors in Metazoa: cloning of a metabotropic glutamate/GABA-like receptor from the marine sponge Geodia cydonium.

1999

To date, no conclusive evidence has been presented for the existence of neuronal-like elements in Porifera (sponges). In the present study, isolated cells from the marine sponge Geodia cydonium are shown to react to the excitatory amino acid glutamate with an increase in the concentration of intracellular calcium [Ca2+]i. This effect can also be observed when the compounds L-quisqualic acid (L-QA) or L-(+)-2-amino-4-phosphonobutyric acid (L-AP-4) are used. The effect of L-QA and L-AP-4, both agonists for metabotropic glutamate receptors (mGluRs), can be abolished by the antagonist of group I mGluRs, (RS)-alpha-methyl-4-carboxyphenylglycine. These data suggest that sponge cells contain an mG…

HistologyMolecular Sequence DataGlutamic AcidClass C GPCRBiologyReceptors Metabotropic GlutamatePathology and Forensic MedicineMiceReceptors GABAAnimalsAmino Acid SequenceCloning MolecularSequence Homology Amino AcidMetabotropic glutamate receptor 4Metabotropic glutamate receptor 7Metabotropic glutamate receptor 6Cell BiologyRecombinant ProteinsPoriferaRatsKineticsDrosophila melanogasternervous systemBiochemistryMetabotropic glutamate receptorMetabotropic glutamate receptor 1CalciumMetabotropic glutamate receptor 3Metabotropic glutamate receptor 2Excitatory Amino Acid AntagonistsSequence AlignmentCell and tissue research
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Differentiation capacity of epithelial cells in the sponge Suberites domuncula.

2004

Sponges (phylum Porifera) represent the oldest metazoans. Their characteristic metazoan adhesion molecules and transcription factors enable them to establish a complex "Bauplan" ; three major differentiated cell types (epithelial cells, skeletal cells/sclerocytes, and contractile cells) can be distinguished. Since no molecular markers are as yet available to distinguish these somatic cells or the corresponding embryonic cells from which they originate, we have selected the following three genes for their characterization: noggin (a signaling molecule in development), a caspase that encodes an apoptotic molecule, and silicatein. Silicatein is an enzyme that is involved in the synthesis of si…

HistologySuberites domuncula; sponges; cell differentiationCellular differentiationMolecular Sequence DataPinacodermBiologyPathology and Forensic MedicineEvolution MolecularDemospongeMesohylAnimalsAmino Acid SequenceNogginCloning MolecularPhylogenySclerocyteCell AggregationSequence Homology Amino AcidSilicatesProteinsCell DifferentiationCell BiologyAnatomybiology.organism_classificationCell biologySuberites domunculaSpongeCaspasesCarrier ProteinsSuberitesCell and tissue research
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Zebrafish vimentin: molecular characterization, assembly properties and developmental expression

1998

To provide a basis for the investigation of the intermediate filament (IF) protein vimentin in one of the most promising experimental vertebrate systems, the zebrafish (Danio rerio), we have isolated a cDNA clone of high sequence identity to and with the characteristic features of human vimentin. Using this clone we produced recombinant zebrafish vimentin and studied its assembly behaviour. Unlike other vimentins, zebrafish vimentin formed unusually thick filaments when assembled at temperatures below 21 degrees C. At 37 degrees C few filaments were observed, which often also terminated in aggregated masses, indicating that its assembly was severely disturbed at this temperature. Between 21…

HistologyTroutMolecular Sequence DataCellDanioClone (cell biology)Vimentinmacromolecular substancesPathology and Forensic MedicineMyosinmedicineAnimalsHumansVimentinTissue DistributionAmino Acid SequenceRNA MessengerCloning MolecularIntermediate filamentPeptide sequenceZebrafishZebrafishSequence Homology Amino AcidbiologyTemperatureGene Expression Regulation DevelopmentalCell BiologyGeneral Medicinebiology.organism_classificationImmunohistochemistryMolecular biologyCell biologyMicroscopy Electronmedicine.anatomical_structurebiology.protein
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