Search results for "Cluster Analysis"

showing 10 items of 848 documents

Cluster analysis of mrna expression levels identifies multiple sequential patterns following focal cerebral ischemia

2012

AIM The purpose of this study is to detect gene expression patterns following focal cerebral ischemia. MATERIAL AND METHODS 25 male Wistar rats were divided into control (n = 8) and ischemic (n = 17) groups. In the ischemic group, slowly progressing focal ischemia was simulated by two-vein occlusion with spreading depression (SD) a cortical microinjection of KCl induced. Ischemic tissue was removed at 2, 8, 24, or 72 h postischemia. Using semiquantitative reverse transcription polymerase chain reaction, we investigated mRNA expression levels of 13 representative genes related to cerebral ischemia. Cluster analysis of the gene expression levels was done. RESULTS In the ischemic group, the ex…

MaleCerebral veinsmedicine.medical_specialtyTranscription GeneticPhotochemistryIschemiaNerve Tissue ProteinsReal-Time Polymerase Chain ReactionBioinformaticsPotassium ChlorideCyclin D1Internal medicineGene expressionElectric ImpedancemedicineAnimalsCluster AnalysisRNA MessengerRats WistarCerebral Cortexbusiness.industryCortical Spreading Depressionmedicine.diseaseCerebral VeinsRatsReverse transcription polymerase chain reactionmedicine.anatomical_structureEndocrinologyReal-time polymerase chain reactionIschemic Attack TransientCerebral cortexCortical spreading depressionSurgeryNeurology (clinical)Intracranial ThrombosisbusinessTurkish Neurosurgery
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Goal orientation profile differences on perceived motivational climate, perceived peer relationships, and motivation-related responses of youth athle…

2006

The aims of this study were twofold: (a) to determine if dispositional achievement goal orientation profiles that are reported in the literature would be observed in a sample of youth athletes, and (b) to examine potential achievement goal orientation profile differences on perceptions of the motivational climate, perceptions of peer relationships, and motivation-related responses. Male soccer players (n=223) aged 9-12 years (mean=10.9, s=0.6) completed a multi-section questionnaire containing assessments of dispositional goal (task, ego) orientations, the perceived task- and ego-involving features of the motivational climate, perceived peer acceptance and friendship quality (positive frien…

MaleCompetitive Behaviormedia_common.quotation_subjectPhysical Therapy Sports Therapy and RehabilitationPersonal SatisfactionPeer relationshipsPeer GroupDevelopmental psychologyOrientation (mental)PerceptionSurveys and QuestionnairesCluster AnalysisHumansOrthopedics and Sports MedicineQuality (business)Interpersonal RelationsChildmedia_commonEgoMotivationGoal orientationbiologyAthletesNeed for achievementbiology.organism_classificationAchievementFriendshipPsychologySocial psychologyGoalsSportsJournal of sports sciences
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Reproducibility of CT Radiomic Features within the Same Patient: Influence of Radiation Dose and CT Reconstruction Settings.

2019

Background Results of recent phantom studies show that variation in CT acquisition parameters and reconstruction techniques may make radiomic features largely nonreproduceable and of limited use for prognostic clinical studies. Purpose To investigate the effect of CT radiation dose and reconstruction settings on the reproducibility of radiomic features, as well as to identify correction factors for mitigating these sources of variability. Materials and Methods This was a secondary analysis of a prospective study of metastatic liver lesions in patients who underwent staging with single-energy dual-source contrast material-enhanced staging CT between September 2011 and April 2012. Technique p…

MaleContrast MediaRadiation Dosage030218 nuclear medicine & medical imaging03 medical and health sciences0302 clinical medicineMedicineHumansRadiology Nuclear Medicine and imagingProspective StudiesCluster analysisNeoplasm StagingReproducibilitybusiness.industryRadiation doseLiver NeoplasmsReproducibility of ResultsReconstruction algorithmMiddle AgedHierarchical clusteringFeature (computer vision)radiomics030220 oncology & carcinogenesisRadiographic Image Interpretation Computer-AssistedFemaleTomographybusinessNuclear medicineTomography X-Ray ComputedCt reconstructionAlgorithmsRadiology
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Cluster of cases of Salmonella enterica serotype Rissen infection in a general hospital, Italy, 2007.

2009

In 2007, three strains of Salmonella enterica serotype Rissen (S. Rissen) were isolated in the laboratory of diagnostic microbiology of the General Hospital of Prato, Tuscany, Italy, over a 1 month and half interval of time. The first isolate was recovered on January 26 from an outpatient with enteritis. Then, two strains were isolated on February 16 and March 11 respectively, from central venous catheters of patients who were being hospitalized in two departments of the Hospital. An epidemiologically linked cluster of cases of salmonellosis was suspected. The three strains were submitted to single enzyme-amplified fragment length polymorphism (SE-AFLP) and XbaI macrorestriction and pulsed-…

MaleCross InfectionMolecular EpidemiologySalmonella RissenInfantSalmonella entericaMiddle AgedSettore MED/42 - Igiene Generale E ApplicataHospitals GeneralBacterial Typing TechniquesElectrophoresis Gel Pulsed-Fieldmolecular subtypingFecesItalyOutpatientsSalmonella Infectionscase clusterAnimalsCluster AnalysisHumansepidemiologyFemaleAmplified Fragment Length Polymorphism AnalysisAgedZoonoses and public health
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Screen media usage, sleep time and academic performance in adolescents: clustering a self-organizing maps analysis.

2014

Screen media usage, sleep time and socio-demographic features are related to adolescents' academic performance, but interrelations are little explored. This paper describes these interrelations and behavioral profiles clustered in low and high academic performance. A nationally representative sample of 3,095 Spanish adolescents, aged 12 to 18, was surveyed on 15 variables linked to the purpose of the study. A Self-Organizing Maps analysis established non-linear interrelationships among these variables and identified behavior patterns in subsequent cluster analyses. Topological interrelationships established from the 15 emerging maps indicated that boys used more passive videogames and compu…

MaleCross-sectional studyEpidemiologyEconomicsIntelligenceEconomics of Training and EducationCulturePsychological interventionSocial Scienceslcsh:MedicineAcademic achievementPediatricsDevelopmental psychologyCultural AnthropologyChild DevelopmentSociologySurveys and QuestionnairesHuman PerformanceMedicine and Health SciencesCluster AnalysisPsychologyPublic and Occupational HealthChildlcsh:ScienceHuman CapitalMultidisciplinarySocial ResearchSocioeconomic Aspects of HealthEducational StatusFemalePsychologyBehavioral and Social Aspects of HealthResearch ArticleSelf-organizing mapAdolescentAffect (psychology)Adolescent MedicineMental Health and PsychiatryHumansCluster analysisSocioeconomic statusSedentary lifestyleBehaviorComputerslcsh:RCognitive PsychologyBiology and Life SciencesAchievementSocial EpidemiologyHealth CareCross-Sectional StudiesVideo GamesSpainAnthropologyDevelopmental PsychologyHuman IntelligenceCognitive Sciencelcsh:QSedentary BehaviorSleepCell PhoneNeurosciencePLoS ONE
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Prevalence of diphtheria toxin antibodies in human sera from a cross-section of the Italian population.

1999

Abstract A polycentric study was carried out between 1993 and 1995 in order to evaluate diphtheria immunity on a representative sample of population from different areas of Italy. To determine diphtheria antitoxin, sera from 5187 apparently healthy subjects, divided according to sex and age groups, were titrated using an ELISA indirect method. A basic protective titre of diphtheria antitoxin (>0.01 IU ml −1 ) was found in 4080 (78.6%) subjects. No statistically significant differences between males and females were observed. Our findings show that the proportion of susceptibles increases with age and a high proportion of adults no longer has diphtheria antitoxin at protective levels since t…

MaleCross-sectional studySerologySeroepidemiologic StudiesPrevalenceCluster AnalysisDiphtheria ToxinChildAged 80 and overeducation.field_of_studybiologyImmunoenzyme techniquesDiphtheriaMiddle AgedAntibodies BacterialInfectious DiseasesItalyChild PreschoolCross-sectional studiesMolecular MedicineFemaleAdults; Cross-sectional studies; Diphtheria; Diphtheria antitoxin; Immunoenzyme techniques; ItalyAntibodyAdultDiphtheria antitoxinAdolescentPopulationcomplex mixturesNOAge DistributionImmunitymedicineHumansAdultsSex DistributioneducationAgedDiphtheria toxinGeneral VeterinaryGeneral Immunology and Microbiologybusiness.industryDiphtheriaPublic Health Environmental and Occupational HealthInfantmedicine.diseaseDiphtheria; Diphtheria antitoxin; Cross-sectional studies; Immunoenzyme techniques; Adults; ItalyImmunologyHumoral immunitybiology.proteinbusiness
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Limited cross-border infections in patients newly diagnosed with HIV in Europe

2013

Background: International travel plays a role in the spread of HIV-1 across Europe. It is, however, not known whether international travel is more important for spread of the epidemic as compared to endogenous infections within single countries. In this study, phylogenetic associations among HIV of newly diagnosed patients were determined across Europe.Results: Data came from the SPREAD programme which collects samples of newly diagnosed patients that are representative for national HIV epidemics. 4260 pol sequences from 25 European countries and Israel collected in 2002-2007 were included.We identified 457 clusters including 1330 persons (31.2% of all patients). The cluster size ranged bet…

MaleEpidemiologyHuman immunodeficiency virus (HIV)Human immunodeficiency virus 1HIV Infectionsmedicine.disease_causeVirologie généralephylogenySettore MED/42 - Igiene Generale E ApplicataMen who have sex with menEMERGENCE0302 clinical medicineMedicine and Health SciencesMedicineInfection controlCluster Analysis030212 general & internal medicineIsraelPathologie maladies infectieusestravelPhylogeny0303 health sciencesMolecular EpidemiologyTravelTransmission (medicine)articlevirus transmissionIMMUNODEFICIENCY-VIRUS TYPE-13. Good healthPeer reviewEuropefemaleInfectious DiseasesSUBTYPE BDRUG-RESISTANT HIV-1RNA Viralmale homosexualAdultstructural geneMolecular Sequence DataNewly diagnosedClusters03 medical and health sciencesmaleSDG 3 - Good Health and Well-beingMOLECULAR EPIDEMIOLOGYSWITZERLANDVirologygeographic distributionHumansTransmissionIn patienthuman030304 developmental biologynonhumanMolecular epidemiologybusiness.industryResearchhigh risk populationVirologie médicalenucleotide sequenceSequence Analysis DNAHuman immunodeficiency virus 1 infectionVirologymajor clinical studyunindexed sequence3121 General medicine internal medicine and other clinical medicineHIV-1businessEurope HIV-1 Transmission ClustersDemographycluster analysis
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Dog sperm swimming parameters analysed by computer-assisted semen analysis of motility reveal major breed differences

2019

Dogs have undergone an intensive artificial selection process ever since the beginning of their relationship with humans. As a consequence, a wide variety of well-defined breeds exist today. Due to the enormous variation in dog phenotypes and the unlikely chance of gene exchange between them, the question arises as to whether they should still be regarded as a single species or, perhaps, they be considered as different taxa that possess different reproductive traits. The aim of this study was therefore to characterize some male reproductive traits, focusing on kinematic characteristics of dog spermatozoa from several breeds. Thirty-seven dogs from the following breeds were used: Staffordshi…

MaleEvolutionmedicine.medical_treatmentbiology.animal_breedZoologyCASA‐MotSemenArtificial inseminationSemen analysisStaffordshire bull terrierSperm kinematicsEndocrinologyDogsSingle speciesmedicineAnimalsCluster AnalysisInsemination ArtificialPhylogenyElectronic Data Processingbiologymedicine.diagnostic_testArtificial inseminationSpermSpermatozoaBreedSemen AnalysisMultivariate AnalysisDog breedsLabrador RetrieverAnimal Science and ZoologyBiotechnologyReproduction in Domestic Animals
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Association of tenacious goal pursuit and flexible goal adjustment with out-of-home mobility among community-dwelling older people

2018

Background As people age, functional losses may limit the potential to get outside the home and participate in desired activities and community life. Coping with age-related losses has been reported to be important for psychological well-being. Hitherto is not known whether active use of coping strategies also helps maintain out-of-home mobility. Aims We investigated how two coping strategies, tenacious goal pursuit (TGP; persistency in reaching one’s goals) and flexible goal adjustment (FGA; adjusting one’s goals to changed circumstances), are associated with life-space mobility and perceived autonomy in participation outdoors among community-dwelling older people. Methods Participants (n …

MaleGerontologyitsemäärääminenAgingCoping (psychology)media_common.quotation_subject03 medical and health sciences0302 clinical medicineSurveys and QuestionnairesAdaptation PsychologicalliikuntakykyCommunity lifeCluster AnalysisHumans030212 general & internal medicineMobility LimitationautonomyAutonomyAgedosallistuminenmedia_commonMobilityAged 80 and overDepressionGeriatrics gerontologyselviytyminenagingParticipationGoal pursuitliikkuvuusikääntyminenOriginal ArticleFemaleIndependent LivingCopingGeriatrics and GerontologyOlder peoplePsychologyGoals030217 neurology & neurosurgeryAutonomyAging Clinical and Experimental Research
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Cross-species transcriptomic analysis elucidates constitutive aryl hydrocarbon receptor activity

2014

Background Research on the aryl hydrocarbon receptor (AHR) has largely focused on variations in toxic outcomes resulting from its activation by halogenated aromatic hydrocarbons. But the AHR also plays key roles in regulating pathways critical for development, and after decades of research the mechanisms underlying physiological regulation by the AHR remain poorly characterized. Previous studies identified several core genes that respond to xenobiotic AHR ligands across a broad range of species and tissues. However, only limited inferences have been made regarding its role in regulating constitutive gene activity, i.e. in the absence of exogenous ligands. To address this, we profiled transc…

MaleHEPATIC GENE-EXPRESSION413 Veterinary scienceMedical and Health SciencesTranscriptomeDIOXIN RECEPTORMice0302 clinical medicineTCDD-induced toxicityReceptorsTranscriptional regulationABNORMAL LIVER DEVELOPMENT2.1 Biological and endogenous factorsCluster AnalysisAetiologyReceptorAH RECEPTORIN-VIVOAryl hydrocarbon receptorGeneticsRegulation of gene expression0303 health sciencesBiological Sciencesrespiratory systemCore-gene batteryAryl HydrocarbonOrgan Specificity030220 oncology & carcinogenesisAHR endogenous ligands2378-TETRACHLORODIBENZO-P-DIOXIN TCDDSignal transductionResearch ArticleBiotechnologySignal TransductionProtein BindingBioinformatics1.1 Normal biological development and functioningeducationRAT-LIVERConstitutive gene expressionBiologyMICE LACKING03 medical and health sciencesSpecies SpecificityUnderpinning researchInformation and Computing SciencesGeneticsAnimals030304 developmental biologyAryl hydrocarbon receptor activityGene Expression ProfilingComputational BiologyAryl hydrocarbon receptorCELL-CYCLE CONTROLRatsrespiratory tract diseasesGene expression profilingReceptors Aryl HydrocarbonGene Expression RegulationSUBCHRONIC EXPOSUREbiology.proteinDigestive DiseasesTranscriptome
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