Search results for "Co-clustering"

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A Coclustering Approach for Mining Large Protein-Protein Interaction Networks

2012

Several approaches have been presented in the literature to cluster Protein-Protein Interaction (PPI) networks. They can be grouped in two main categories: those allowing a protein to participate in different clusters and those generating only nonoverlapping clusters. In both cases, a challenging task is to find a suitable compromise between the biological relevance of the results and a comprehensive coverage of the analyzed networks. Indeed, methods returning high accurate results are often able to cover only small parts of the input PPI network, especially when low-characterized networks are considered. We present a coclustering-based technique able to generate both overlapping and nonove…

Biologycomputer.software_genreBioinformatics network analysis co-clusteringTask (project management)Set (abstract data type)Protein Interaction MappingGeneticsCluster (physics)Cluster AnalysisHumansRelevance (information retrieval)Protein Interaction MapsCluster analysisStructure (mathematical logic)Applied MathematicsProteinsprotein-protein interaction networksbiological networksComputingMethodologies_PATTERNRECOGNITIONCover (topology)Co-clusteringData miningcomputerAlgorithmsBiological networkBiotechnologyIEEE/ACM Transactions on Computational Biology and Bioinformatics
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