Search results for "CoDi"
showing 10 items of 1391 documents
Possible amphi-Atlantic dispersal of Scyllarus lobsters (Crustacea: Scyllaridae): molecular and larval evidence
2017
14 pages, 6 figures, 1 table
Hylotelephium spectabile, a New Host for Carnation Tortrix Moth (Cacoecimorpha pronubana) and Molecular Characterization in Greece
2021
Simple Summary Hylotelephium spectabile (Saxifragales, Crassulaceae), a widespread ornamental plant was found infested by larvae of Cacoecimorpha pronubana (Lepidoptera, Tortricidae) a highly polyphagous pest of a wide range of crop, as well as ornamental plants. To the best of our knowledge, this finding suggests that H. spectabile should be considered a new host plant for C. pronubana. Moreover, molecular characterization of the Greek pest population place it along with European species clade. Abstract Cacoecimorpha pronubana (Hübner) (Lepidoptera, Tortricidae) is a highly polyphagous pest of a wide range of crop and ornamental plants. It is of Mediterranean origin and widespread in Europ…
Immigrant Tortricidae: Holarctic versus Introduced Species in North America
2020
In support of a comprehensive update to the checklist of the moths of North America, we attempt to determine the status of 151 species of Tortricidae present in North America that may be Holarctic, introduced, or sibling species of their European counterparts. Discovering the natural distributions of these taxa is often difficult, if not impossible, but several criteria can be applied to determine if a species that is present in both Europe and North America is natively Holarctic, introduced, or represented by different but closely related species on each continent. We use DNA barcodes (when available), morphology, host plants, and historical records (literature and museum specimens) to mak…
Thallus Growth Stage and Geographic Origin Shape Microalgal Diversity in Ramalina farinacea Lichen Holobionts
2021
Lichen symbioses are microecosystems hosting many other living organisms besides the two major lichen symbionts (i.e., lichenized fungi [the mycobiont] and green microalgae or cyanobacteria [the photobiont]). Recent investigations evidenced that other fungi, non-photosynthetic bacteria, and microalgae co-inhabit within the lichen thalli, but their diversity and their roles are still underinvestigated. Here we present an ad hoc stratified sampling design and in-depth Illumina paired-end metabarcoding approach to explore microalgal diversity in lichen thalli of the model species Ramalina farinacea from different ecologies. Lichen thalli were surveyed according to three different sizes, and di…
First record of the pencil cardinal Epigonus denticulatus (Perciformes: Epigonidae) in the Azores archipelago
2021
The pencil cardinal Epigonus denticulatus is a small deep-water fish inhabiting continental slopes usually between 300 m and 600 m depth. We report the first record of E. denticulatus in the Azores archipelago, where one specimen was found floating by fisherman off Faial island. Meristic and morphometric characters are in accordance with those reported for the species and molecular analyses further supported species identity. The record of E. denticulatus as a native species in the Azores, increases the number of Epigonus species in the region for a total of three. This article is protected by copyright. All rights reserved.
<p><strong>In BOLD we trust? A commentary on the reliability of specimen identification for DNA barcoding: a case study on burrower bugs …
2016
An assessment was performed regarding the accuracy of various types of data deposited in the Barcode of Life Data system (BOLD) related to the true bug family Cydnidae (Hemiptera: Heteroptera). Taxonomic nomenclature and classification, identification reliability, and the correctness of the data provided in the "Taxon description" were analyzed and commented on with respect to both available versions of the BOLD system, i.e. version 3 and beta version 4. Numerous mistakes in taxonomy, the relevance of the taxa names, and species misidentifications in BOLD version 3 were found and, more importantly, similar errors were detected in BOLD version 4 as well. We suggest that if the BOLD system is…
DNA barcoding of marine fishes from Saudi Arabian waters of the Gulf
2019
We used the cytochrome oxidase subunit I (coI) gene DNA to barcode 117 endemic Gulf and cosmopolitan Indo-West Pacific fish species belonging to 54 families and 13 orders. Novel DNA barcodes were provided for 18 fish species (Trachinocephalus sp., Nematalosa sp., Herklotsichthys lossei, Upeneus doriae, Trachurus indicus, Apogonichthyoides taeniatus, Verulux cypselurus, Favonigobius sp., Suezichthus gracilis, Sillago sp., Brachirus orientalis, Pegusa sp., Lepidotrigla bispinosa, Lepidotrigla sp., Grammoplites suppositus, Hippichthys sp., Paramonacanthus sp. and Triacanthus sp.). The species delimitation analysis, conducted with Poisson tree processes- Bayesian PTP (PTP-bPTP) and nucleotide-d…
Acoustic communication in crocodilians: from behaviour to brain.
2009
Crocodilians and birds are the modern representatives of Phylum Archosauria. Although there have been recent advances in our understanding of the phylogeny and ecology of ancient archosaurs like dinosaurs, it still remains a challenge to obtain reliable information about their behaviour. The comparative study of birds and crocodiles represents one approach to this interesting problem. One of their shared behavioural features is the use of acoustic communication, especially in the context of parental care. Although considerable data are available for birds, information concerning crocodilians is limited. The aim of this review is to summarize current knowledge about acoustic communication in…
Massively Parallel ANS Decoding on GPUs
2019
In recent years, graphics processors have enabled significant advances in the fields of big data and streamed deep learning. In order to keep control of rapidly growing amounts of data and to achieve sufficient throughput rates, compression features are a key part of many applications including popular deep learning pipelines. However, as most of the respective APIs rely on CPU-based preprocessing for decoding, data decompression frequently becomes a bottleneck in accelerated compute systems. This establishes the need for efficient GPU-based solutions for decompression. Asymmetric numeral systems (ANS) represent a modern approach to entropy coding, combining superior compression results wit…
Massively Parallel Huffman Decoding on GPUs
2018
Data compression is a fundamental building block in a wide range of applications. Besides its intended purpose to save valuable storage on hard disks, compression can be utilized to increase the effective bandwidth to attached storage as realized by state-of-the-art file systems. In the foreseeing future, on-the-fly compression and decompression will gain utmost importance for the processing of data-intensive applications such as streamed Deep Learning tasks or Next Generation Sequencing pipelines, which establishes the need for fast parallel implementations. Huffman coding is an integral part of a number of compression methods. However, efficient parallel implementation of Huffman decompre…