Search results for "Collagen"

showing 10 items of 620 documents

Jararhagin-derived RKKH Peptides Induce Structural Changes in α1I Domain of Human Integrin α1β1

2003

Integrin alpha(1)beta(1) is one of four collagen-binding integrins in humans. Collagens bind to the alphaI domain and in the case of alpha(2)I collagen binding is competitively inhibited by peptides containing the RKKH sequence and derived from the metalloproteinase jararhagin of snake venom from Bothrops jararaca. In alpha(2)I, these peptides bind near the metal ion-dependent adhesion site (MIDAS), where a collagen (I)-like peptide is known to bind; magnesium is required for binding. Published structures of the ligand-bound "open" conformation of alpha(2)I differs significantly from the "closed" conformation seen in the structure of apo-alpha(2)I near MIDAS. Here we show that two peptides,…

Models MolecularProtein ConformationStereochemistryIntegrinAlpha (ethology)PeptideCrystallography X-RayBinding CompetitiveBiochemistryCollagen Type IProtein Structure SecondaryIntegrin alpha1beta1Protein structureCrotalid VenomsHumansMagnesiumAmino Acid SequenceBinding siteMolecular BiologyPeptide sequenceFluorescent Dyeschemistry.chemical_classificationBinding SitesCalorimetry Differential ScanningMolecular StructurebiologyMetalloendopeptidasesCell BiologyPeptide FragmentsRecombinant ProteinsSpectrometry FluorescencechemistryJararhaginHelixbiology.proteinCrystallizationJournal of Biological Chemistry
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Molecular mechanism of α2β1 integrin interaction with human echovirus 1

2009

Conformational activation increases the affinity of integrins to their ligands. On ligand binding, further changes in integrin conformation elicit cellular signalling. Unlike any of the natural ligands of alpha2beta1 integrin, human echovirus 1 (EV1) seemed to bind more avidly a 'closed' than an activated 'open' form of the alpha2I domain. Furthermore, a mutation E336A in the alpha2 subunit, which inactivated alpha2beta1 as a collagen receptor, enhanced alpha2beta1 binding to EV1. Thus, EV1 seems to recognize an inactive integrin, and not even the virus binding could trigger the conformational activation of alpha2beta1. This was supported by the fact that the integrin clustering by EV1 did …

Models MolecularProtein Conformationmedia_common.quotation_subjectIntegrinCHO CellsIn Vitro TechniquesBiologyp38 Mitogen-Activated Protein KinasesCD49cArticleGeneral Biochemistry Genetics and Molecular BiologyCell LineCollagen receptorCricetulusCricetinaeChlorocebus aethiopsAnimalsHumansBinding siteInternalizationMolecular Biologymedia_commonBinding SitesGeneral Immunology and MicrobiologyGeneral NeuroscienceRecombinant ProteinsEnterovirus B HumanProtein Structure TertiaryCell biologyAmino Acid SubstitutionIntegrin alpha MBiochemistryMutagenesis Site-Directedbiology.proteinReceptors VirusIntegrin beta 6Integrin alpha2beta1Signal transductionSignal TransductionThe EMBO Journal
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Influence of proline residues in transmembrane helix packing

2003

Integral membrane proteins often contain proline residues in their alpha-helical transmembrane (TM) fragments, which may strongly influence their folding and association. Pro-scanning mutagenesis of the helical domain of glycophorin A (GpA) showed that replacement of the residues located at the center abrogates helix packing while substitution of the residues forming the ending helical turns allows dimer formation. Synthetic TM peptides revealed that a point mutation of one of the residues of the dimerization motif (L75P) located at the N-terminal helical turn of the GpA TM fragment, adopts a secondary structure and oligomeric state similar to the wild-type sequence in detergents. In additi…

Models MolecularProtein FoldingGlycosylationProlineStereochemistryProtein ConformationCollagen helixRecombinant Fusion ProteinsMolecular Sequence DataEndoplasmic ReticulumProtein Structure SecondaryComputers MolecularProtein structureStructural BiologyAmino Acid SequenceGlycophorinsMolecular BiologyIntegral membrane proteinProtein secondary structureChemistryCell MembraneProteïnes de membranaWaterLipidsTransmembrane proteinPeptide FragmentsCrystallographyTransmembrane domainMembrane proteinHelixMutagenesis Site-DirectedDimerization
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The regulation mechanism for the auto-inhibition of binding of human filamin A to integrin.

2009

The ability of adhesion receptors to transmit biochemical signals and mechanical force across cell membranes depends on interactions with the actin cytoskeleton. Human filamins are large actin cross-linking proteins that connect integrins to the cytoskeleton. Filamin binding to the cytoplasmic tail of beta integrins has been shown to prevent integrin activation in cells, which is important for controlling cell adhesion and migration. The molecular-level mechanism for filamin binding to integrin has been unclear, however, as it was recently demonstrated that filamin undergoes intramolecular auto-inhibition of integrin binding. In this study, using steered molecular dynamics simulations, we f…

Models MolecularProtein Foldinganimal structuresIntegrin beta ChainsFilaminsmacromolecular substancesBiologyFilaminCD49cCollagen receptorFilamin bindingPhosphoserineContractile ProteinsStructural BiologyHumansPhosphorylationMolecular BiologyIntegrin bindingBinding SitesMicrofilament ProteinsActin cytoskeletonCell biologybody regionsIntegrin alpha Mbiology.proteinIntegrin beta 6Stress MechanicalPeptidesProtein BindingJournal of molecular biology
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Concerted motions of the integrin-binding loop and the C-terminal tail of the non-RGD disintegrin obtustatin.

2003

Obtustatin is a potent and selective inhibitor of the alpha1beta1 integrin in vitro and of angiogenesis in vivo. It possesses an integrin recognition loop that harbors, in a lateral position, the inhibitory 21KTS23 motif. We report an analysis of the dynamics of the backbone and side-chain atoms of obtustatin by homonuclear NMR methods. Angular mobility has been calculated for 90 assigned cross-peaks from 22 off-resonance rotating frame nuclear Overhauser effect spectroscopy spectra recorded at three magnetic fields. Our results suggest that the integrin binding loop and the C-terminal tail display concerted motions, which can be interpreted by hinge effects. Among the integrin-binding moti…

Models MolecularThreonineIntegrinsMagnetic Resonance SpectroscopyStereochemistryProtein ConformationIntegrinAmino Acid MotifsPlasma protein bindingNuclear Overhauser effectViper VenomsBiochemistryIntegrin alpha1beta1SerineProtein structureDisintegrinSerineThreonineMolecular BiologyIntegrin bindingAlanineModels StatisticalbiologyChemistryHydrogen BondingCell BiologyProtein Structure Tertiarybiology.proteinCollagenPeptidesProtein BindingThe Journal of biological chemistry
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Evaluation of consistency in spheroid invasion assays

2016

Multicellular tumor spheroids embedded in a matrix represent invaluable tools to analyze cell invasion. Spheroid sizes and invasiveness are the main observables easily measurable to evaluate effects of biological or pharmaceutical manipulations on invasion. They largely account for these 3-D platforms variability, leading to flaws in data interpretation. No method has been established yet that characterizes this variability and guarantees a reliable use of 3-D platforms. Spheroid initial/end sizes and invasiveness were systematically analyzed and compared in spheroids of U87MG cells generated by three different methods and embedded at different times in a collagen matrix. A normality test w…

Models StatisticalCell Culture TechniquesReproducibility of ResultsArticle570 Life sciencesCell MovementCell Line TumorSpheroids CellularTumor Cells CulturedHumansNeoplasm InvasivenessCollagenCell Proliferation570 Biowissenschaften
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One-stage laser-microtextured implants immediately placed in the inter-radicular septum of molar fresh extraction sockets associated with GBR techniq…

2018

Background The outcome of one-stage trans-mucosal immediate implants with simultaneous guided bone regeneration (GBR) technique has become highly predictable. Furthermore, when this approach is performed to place one-stage implants into the inter-radicular septum of fresh extraction sockets in the molar region, the risk of incorrect emergence profile and off-angle loading is reduced. The aim of the present study was to clinically evaluate the horizontal hard and soft tissue changes, and radiographically the vertical socket walls remodeling, and the early peri-implant marginal bone loss (EMBL) following the placement of immediate one-stage implants in the inter-radicular septum of molar fres…

Molarcollagen membrane; GBR; laser-microtextured collar surface; one-stage implant; dentistry (all)one-stage implantRadiographyDentistryGBR03 medical and health sciences0302 clinical medicineMedicineBone regenerationGeneral Dentistrydentistry (all)laser-microtextured collar surfacebusiness.industryResearchExtraction (chemistry)Significant differencecollagen membraneSoft tissueOne stage030206 dentistry:CIENCIAS MÉDICAS [UNESCO]030220 oncology & carcinogenesisUNESCO::CIENCIAS MÉDICASImplantOral Surgerybusiness
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Correlations between transmural mechanical and morphological properties in porcine thoracic descending aorta.

2015

Determination of correlations between transmural mechanical and morphological properties of aorta would provide a quantitative baseline for assessment of preventive and therapeutic strategies for aortic injuries and diseases. A multimodal and multidisciplinary approach was adopted to characterize the transmural morphological properties of descending porcine aorta. Histology and multi-photon microscopy were used for describing the media layer micro-architecture in the circumferential-radial plane, and Fourier Transform infrared imaging spectroscopy was utilized for determining structural protein, and total protein content. The distributions of these quantified properties across the media thi…

MorphologyMorphology (linguistics)Materials scienceSwineBiomedical EngineeringAorta ThoracicMulti-photon microscopy030204 cardiovascular system & hematologyArticleNanoindentationBiomaterials03 medical and health sciencesFourier Transform infrared imaging spectroscopy0302 clinical medicineElastic Modulusmedicine.arteryMaterials TestingMicroscopymedicineAnimalsNanotechnologyThoracic aortaElastic modulusAortaMechanical Phenomena030304 developmental biologyElastic Modulu0303 health sciencesAortabiologyAnimalFiber orientationAnatomyBiomaterialElastinBiomechanical PhenomenaExtracellular MatrixLamella (surface anatomy)Mechanics of MaterialsDescending aortabiology.proteinCollagenElastinBiomedical engineeringJournal of the mechanical behavior of biomedical materials
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Calcitonin gene related peptide gene expression in collagen-induced arthritis

1995

On a evalue par hybridation in situ semi-quantitative les variations de l'expression genique du peptide lie au gene de la calcitonine (CGRP) dans les motoneurones spinaux et dans les ganglions des racines dorsales (GRD) de rats chez lesquels l'arthrite a ete induite par l'administration de collagene II (AIC). On a examine les effets d'un traitement systemique avec le corticosteroide budesonide sur l'expression basale du CGRP ainsi que sur ses variations dans des conditions d'inflammation. Dans les GRD, l'AIC a induit une augmentation significative des taux d'ARNm du CGRP. Le budesonide a reduit les taux d'ARNm du CGRP constitutif de ces GRD comparativement a ceux des rats temoins non traite…

Motor NeuronsPharmacologymedicine.medical_specialtyPhysiologybusiness.industryArthritisCalcitonin Gene-Related PeptideGeneral MedicineCalcitonin gene-related peptideMolecular biologyRatsAnimal modelEndocrinologyGene Expression RegulationGanglia SpinalPhysiology (medical)Internal medicineGene expressionmedicineAnimalsFemaleCollagenRNA MessengerbusinessCollagen-induced arthritisCanadian Journal of Physiology and Pharmacology
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2015

Rapid fibrovascularization is a prerequisite for successful biomaterial engraftment. In addition to their well-known roles in fibrinolysis, urokinase-type plasminogen activator (uPA) and tissue plasminogen activator (tPA) or their inhibitor plasminogen activator inhibitor-1 (PAI-1) have recently been implicated as individual mediators in non-fibrinolytic processes, including cell adhesion, migration, and proliferation. Since these events are critical for fibrovascularization of biomaterial, we hypothesized that the components of the plasminogen activation system contribute to biomaterial engraftment. Employing in vivo and ex vivo microscopy techniques, vessel and collagen network formation …

MultidisciplinaryChemistrymedicine.medical_treatmentTissue plasminogen activatorCell biologySurface coatingIn vivoImmunologyFibrinolysisCollagen networkmedicineCell adhesionPlasminogen activatorEx vivomedicine.drugPLOS ONE
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