Search results for "Component analysis"
showing 10 items of 562 documents
Evolutionary morphology in shape and size of haptoral anchors in 14 Ligophorus spp. (Monogenea: Dactylogyridae).
2017
The search for phylogenetic signal in morphological traits using geometric morphometrics represents a powerful approach to estimate the relative weights of convergence and shared evolutionary history in shaping organismal form. We assessed phylogenetic signal in the form of ventral and dorsal haptoral anchors of 14 species of Ligophorus occurring on grey mullets (Osteichthyes: Mugilidae) from the Mediterranean, the Black Sea and the Sea of Azov. The phylogenetic relationships among these species were mapped onto the morphospaces of shape and size of dorsal and ventral anchors and two different tests were applied to establish whether the spatial positions in the morphospace were dictated by …
Semisupervised nonlinear feature extraction for image classification
2012
Feature extraction is of paramount importance for an accurate classification of remote sensing images. Techniques based on data transformations are widely used in this context. However, linear feature extraction algorithms, such as the principal component analysis and partial least squares, can address this problem in a suboptimal way because the data relations are often nonlinear. Kernel methods may alleviate this problem only when the structure of the data manifold is properly captured. However, this is difficult to achieve when small-size training sets are available. In these cases, exploiting the information contained in unlabeled samples together with the available training data can si…
Robust Principal Component Analysis of Data with Missing Values
2015
Principal component analysis is one of the most popular machine learning and data mining techniques. Having its origins in statistics, principal component analysis is used in numerous applications. However, there seems to be not much systematic testing and assessment of principal component analysis for cases with erroneous and incomplete data. The purpose of this article is to propose multiple robust approaches for carrying out principal component analysis and, especially, to estimate the relative importances of the principal components to explain the data variability. Computational experiments are first focused on carefully designed simulated tests where the ground truth is known and can b…
Neolithic mitochondrial haplogroup H genomes and the genetic origins of Europeans
2013
Brotherton, Paul et al.-- The Genographic Consortium
Detection of Invisible Damages in ‘Rojo Brillante’ Persimmon Fruit at Different Stages Using Hyperspectral Imaging and Chemometrics
2021
[EN] The main cause of flesh browning in 'Rojo Brillante' persimmon fruit is mechanical damage caused during harvesting and packing. Innovation and research on nondestructive techniques to detect this phenomenon in the packing lines are necessary because this type of alteration is often only seen when the final consumer peels the fruit. In this work, we have studied the application of hyperspectral imaging in the range of 450-1040 nm to detect mechanical damage without any external symptoms. The fruit was damaged in a controlled manner. Later, images were acquired before and at 0, 1, 2 and 3 days after damage induction. First, the spectral data captured from the images were analysed through…
Land Snails as a Valuable Source of Fatty Acids: A Multivariate Statistical Approach
2019
The fatty acid (FA) profile of wild Theba pisana, Cornu aspersum, and Eobania vermiculata land snail samples, collected in Sicily (Southern Italy), before and after heat treatment at +100 °C were examined by gas chromatography with a flame ionization detector (GC-FID). The results show a higher content of polyunsaturated fatty acids (PUFAs) in all of the examined raw snails samples, representing up to 48.10% of the total fatty acids contents, followed by monounsaturated fatty acids (MUFAs). The thermal processing of the snail samples examined determined an overall reduction of PUFA levels (8.13%, 7.75%, and 4.62% for T. pisana, C. aspersum and E. vermiculata samples, respectively) and a spe…
Remote Photoplethysmography measurement using constrained ICA
2017
Remote Photoplethysmography (rPPG) is a technique that consists in estimating physiological parameters such as heart rate from live or recorded video sequences taken by conventional camera or even webcams. This technique is increasingly used in many application fields thanks to its simplicity and affordability. The basic idea is that the arterial blood flow shows regularity due to the heartbeat. This regularity is manifested by very small periodic variations in the color of the skin, which can be isolated and quantified by signal and image processing methods. In this context, Independent Component Analysis (ICA) is largely used to separate the signal due to arterial flow from signals from o…
A more distinctive representation for 3D shape descriptors using principal component analysis
2015
Many researchers have used the Heat Kernel Signature (or HKS) for characterizing points on non-rigid three-dimensional shapes and Classical Multidimensional Scaling (Classical MDS) method in object classification which we quote, in particular, the example of Jian Sun et al. (2009) [1]. However, in this paper, the main focuses on classification that we propose a concise and provably factorial method by invoking Principal Component Analysis (PCA) as a classifier to improve the scheme of 3D shape classification. To avoid losing or disordering information after extracting features from the mesh, PCA is used instead of the Classical MDS to discriminate-as much as possible-feature points for each…
A comparative analysis of genetic variation in rootstocks and scions of old olive trees – a window into the history of olive cultivation practices an…
2014
Background Past clonal propagation of olive trees is intimately linked to grafting. However, evidence on grafting in ancient trees is scarce, and not much is known about the source of plant material used for rootstocks. Here, the Simple Sequence Repeat (SSR) marker technique was used to study genetic diversity of rootstocks and scions in ancient olive trees from the Levant and its implications for past cultivation of olives. Leaf samples were collected from tree canopies (scions) and shoots growing from the trunk base (suckers). A total of 310 trees were sampled in 32 groves and analyzed with 14 SSR markers. Results In 82.7% of the trees in which both scion and suckers could be genotyped, t…
Ancient human genomes suggest three ancestral populations for present-day Europeans
2014
We sequenced the genomes of a ∼7,000-year-old farmer from Germany and eight ∼8,000-year-old hunter-gatherers from Luxembourg and Sweden. We analysed these and other ancient genomes1,2,3,4 with 2,345 contemporary humans to show that most present-day Europeans derive from at least three highly differentiated populations: west European hunter-gatherers, who contributed ancestry to all Europeans but not to Near Easterners; ancient north Eurasians related to Upper Palaeolithic Siberians3, who contributed to both Europeans and Near Easterners; and early European farmers, who were mainly of Near Eastern origin but also harboured west European hunter-gatherer related ancestry. We model these popula…