Search results for "Computation"

showing 10 items of 7362 documents

Towards human cell simulation

2019

The faithful reproduction and accurate prediction of the phe-notypes and emergent behaviors of complex cellular systems are among the most challenging goals in Systems Biology. Although mathematical models that describe the interactions among all biochemical processes in a cell are theoretically feasible, their simulation is generally hard because of a variety of reasons. For instance, many quantitative data (e.g., kinetic rates) are usually not available, a problem that hinders the execution of simulation algorithms as long as some parameter estimation methods are used. Though, even with a candidate parameterization, the simulation of mechanistic models could be challenging due to the extr…

Constraint-based modelingAgent-based simulation; Big data; Biochemical simulation; Computational intelligence; Constraint-based modeling; Fuzzy logic; High-performance computing; Model reduction; Multi-scale modeling; Parameter estimation; Reaction-based modeling; Systems biology; Theoretical Computer Science; Computer Science (all)Computer scienceBiochemical simulationDistributed computingSystems biologyBig dataComputational intelligenceContext (language use)ING-INF/05 - SISTEMI DI ELABORAZIONE DELLE INFORMAZIONITheoretical Computer ScienceReduction (complexity)Big dataParameter estimationHigh-performance computingComputational intelligenceAgent-based simulationMathematical modelbusiness.industryModel reductionComputer Science (all)Multi-scale modelingINF/01 - INFORMATICASupercomputerVariety (cybernetics)Fuzzy logicReaction-based modelingbusinessSystems biology
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A pattern recognition approach for peak prediction of electrical consumption

2016

Predicting and mitigating demand peaks in electrical networks has become a prevalent research topic. Demand peaks pose a particular challenge to energy companies because these are difficult to foresee and require the net to support abnormally high consumption levels. In smart energy grids, time-differentiated pricing policies that increase the energy cost for the consumers during peak periods, and load balancing are examples of simple techniques for peak regulation. In this paper, we tackle the task of predicting power peaks prior to their actual occurrence in the context of a pilot Norwegian smart grid network.

Consumption (economics)Computer sciencebusiness.industry020209 energyLoad balancing (electrical power)Pattern recognitionContext (language use)02 engineering and technologyComputer Science ApplicationsTheoretical Computer SciencePower (physics)Task (project management)Computational Theory and MathematicsArtificial IntelligencePattern recognition (psychology)0202 electrical engineering electronic engineering information engineering020201 artificial intelligence & image processingThe InternetArtificial intelligencebusinessSoftwareEnergy (signal processing)Integrated Computer-Aided Engineering
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Inducible Genetic Code Expansion in Eukaryotes

2020

Abstract Genetic code expansion (GCE) is a versatile tool to site‐specifically incorporate a noncanonical amino acid (ncAA) into a protein, for example, to perform fluorescent labeling inside living cells. To this end, an orthogonal aminoacyl‐tRNA‐synthetase/tRNA (RS/tRNA) pair is used to insert the ncAA in response to an amber stop codon in the protein of interest. One of the drawbacks of this system is that, in order to achieve maximum efficiency, high levels of the orthogonal tRNA are required, and this could interfere with host cell functionality. To minimize the adverse effects on the host, we have developed an inducible GCE system that enables us to switch on tRNA or RS expression whe…

Context (language use)Computational biology010402 general chemistry01 natural sciencesBiochemistryInsert (molecular biology)Amino Acyl-tRNA SynthetasesRNA TransferEscherichia coliHumansunnatural amino acidAmino AcidsMolecular BiologyT-RExchemistry.chemical_classificationTet-On010405 organic chemistryChemistryCommunicationOrganic ChemistryEukaryotaGenetic codeamber suppressionCommunications0104 chemical sciencesAmino acidMaximum efficiencyFluorescent labellingHEK293 CellsGenetic CodePylRSTransfer RNAMolecular MedicineAmber Stop CodonChemBioChem
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Prediction of the chemiluminescent behaviour of phenols and polyphenols.

2002

Abstract A paper from this laboratory ‘J. Anal. Chem. 73 (2001) 4301’ was recently published and dealing with the first attempt to apply molecular connectivity calculations to predict a chemical property with analytical usefulness; namely, the chemiluminescent behaviour of substances when react with common strong oxidants in liquid phase. In the present work, the usefulness of molecular topology on the search for new chemiluminescent compounds is clearly demonstrated. The proposed discriminant equation, represented a success of 92.7% in the prediction. The present paper is the further step from the cited paper; it is dealing on the application of molecular connectivity calculations (former …

Continuous flowLiquid phaseAnalytical Chemistrylaw.inventionchemistry.chemical_compoundchemistryDiscriminantPolyphenolComputational chemistrylawOrganic chemistryPhenolsMolecular topologyChemical propertyChemiluminescenceTalanta
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Partial Discharges analysis and parameters identification by continuous Ant Colony Optimization

2008

The technique of ant colony optimization has been employed in this paper to efficiently deal with the problem of parameters identification in partial discharge, PD, analysis. The latter is a continuous optimization problem. From the technical point of view the identification of these parameters allows the modeling of the phenomenon of Partial Discharges in dielectrics. In this way it is possible the early diagnosis of defects in Medium Voltage cable lines and components and thus it is possible to prevent possible outages and service interruptions. Analytically, the problem consists of finding the Weibull parameters of the Pulse Amplitude Distribution (PAD) distributions allowing the identif…

Continuous optimizationMathematical optimizationEstimation theoryComputer scienceCumulative distribution functionAnt colony optimization algorithmsAnt colonyAlgorithmSearch treeEvolutionary computationWeibull distribution2008 IEEE Congress on Evolutionary Computation (IEEE World Congress on Computational Intelligence)
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SSPMO: A Scatter Tabu Search Procedure for Non-Linear Multiobjective Optimization

2007

We describe the development and testing of a metaheuristic procedure, based on the scatter-search methodology, for the problem of approximating the efficient frontier of nonlinear multiobjective optimization problems with continuous variables. Recent applications of scatter search have shown its merit as a global optimization technique for single-objective problems. However, the application of scatter search to multiobjective optimization problems has not been fully explored in the literature. We test the proposed procedure on a suite of problems that have been used extensively in multiobjective optimization. Additional tests are performed on instances that are an extension of those consid…

Continuous optimizationNonlinear systemMultiobjective optimization problemMathematical optimizationComputer Science::Neural and Evolutionary ComputationMathematicsofComputing_NUMERICALANALYSISGeneral EngineeringEfficient frontierMulti-objective optimizationMetaheuristicGlobal optimizationTabu searchMathematicsINFORMS Journal on Computing
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Efficient simulation of the random-cluster model

2013

The simulation of spin models close to critical points of continuous phase transitions is heavily impeded by the occurrence of critical slowing down. A number of cluster algorithms, usually based on the Fortuin-Kasteleyn representation of the Potts model, and suitable generalizations for continuous-spin models have been used to increase simulation efficiency. The first algorithm making use of this representation, suggested by Sweeny in 1983, has not found widespread adoption due to problems in its implementation. However, it has been recently shown that it is indeed more efficient in reducing critical slowing down than the more well-known algorithm due to Swendsen and Wang. Here, we present…

Continuous phase modulationRandom clusterStatistical Mechanics (cond-mat.stat-mech)Critical phenomenaMonte Carlo methodHigh Energy Physics - Lattice (hep-lat)FOS: Physical sciencesComputational Physics (physics.comp-ph)CombinatoricsHigh Energy Physics - LatticeCluster (physics)Representation (mathematics)Physics - Computational PhysicsAlgorithmCondensed Matter - Statistical MechanicsMathematicsPotts model
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A new approximation procedure for fractals

2003

AbstractThis paper is based upon Hutchinson's theory of generating fractals as fixed points of a finite set of contractions, when considering this finite set of contractions as a contractive set-valued map.We approximate the fractal using some preselected parameters and we obtain formulae describing the “distance” between the “exact fractal” and the “approximate fractal” in terms of the preselected parameters. Some examples and also computation programs are given, showing how our procedure works.

ContractionComputationNumerical analysisApplied MathematicsMathematical analysisAttractorHausdorff–Pompeiu distanceFixed pointFixed pointComputational MathematicsFractalNumerical approximationAttractorApproximation procedureFractalFinite setMathematicsJournal of Computational and Applied Mathematics
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A product space reformulation with reduced dimension for splitting algorithms

2021

AbstractIn this paper we propose a product space reformulation to transform monotone inclusions described by finitely many operators on a Hilbert space into equivalent two-operator problems. Our approach relies on Pierra’s classical reformulation with a different decomposition, which results in a reduction of the dimension of the outcoming product Hilbert space. We discuss the case of not necessarily convex feasibility and best approximation problems. By applying existing splitting methods to the proposed reformulation we obtain new parallel variants of them with a reduction in the number of variables. The convergence of the new algorithms is straightforwardly derived with no further assump…

Control and OptimizationApplied Mathematicsdouglas – rachford algorithm47H05 47J25 49M27 65K10 90C30UNESCO::CIENCIAS TECNOLÓGICASComputational MathematicsOptimization and Control (math.OC)splitting algorithmprojection methodsFOS: Mathematicspierra’s product space reformulationmonotone inclusionsMathematics - Optimization and Controlfeasibility problemComputational Optimization and Applications
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Numerical and Experimental Investigation of Equivalence Ratio (ER) and Feedstock Particle Size on Birchwood Gasification

2017

This paper discusses the characteristics of Birchwood gasification using the simulated results of a Computational Fluid Dynamics (CFD) model. The CFD model is developed and validated with the experimental results obtained with the fixed bed downdraft gasifier available at the University of Agder (UIA), Norway. In this work, several parameters are examined and given importance, such as producer gas yield, syngas composition, lower heating value (LHV), and cold gas efficiency (CGE) of the syngas. The behavior of the parameters mentioned above is examined by varying the biomass particle size. The diameters of the two biomass particles are 11.5 mm and 9.18 mm. All the parameters investigate wit…

Control and OptimizationBirchwood gasification020209 energycold gas efficiencyEnergy Engineering and Power TechnologyBiomassThermodynamics02 engineering and technologycomputational fluid dynamicsBirchwood gasification; computational fluid dynamics; equivalence ratio; cold gas efficiency; syngaslcsh:Technologyequivalence ratio0202 electrical engineering electronic engineering information engineeringElectrical and Electronic EngineeringEngineering (miscellaneous)Petroleum engineeringRenewable Energy Sustainability and the EnvironmentChemistrylcsh:TProducer gassyngasYield (chemistry)ParticleHeat of combustionParticle sizeMass fractionEnergy (miscellaneous)Syngas
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