Search results for "Computer Science Application"
showing 10 items of 3998 documents
FEDRO: a software tool for the automatic discovery of candidate ORFs in plants with c →u RNA editing
2019
RNA editing is an important mechanism for gene expression in plants organelles. It alters the direct transfer of genetic information from DNA to proteins, due to the introduction of differences between RNAs and the corresponding coding DNA sequences. Software tools successful for the search of genes in other organisms not always are able to correctly perform this task in plants organellar genomes. Moreover, the available software tools predicting RNA editing events utilise algorithms that do not account for events which may generate a novel start codon. We present Fedro, a Java software tool implementing a novel strategy to generate candidate Open Reading Frames (ORFs) resulting from Cytidi…
Performance assessment of PPP surveys with open source software using the GNSS GPS-GLONASS-Galileo constellations
2020
In this work, the performance of the multi-GNSS (Global Navigation Satellite System) Precise Point Positioning (PPP) technique, in static mode, is analyzed. Specifically, GPS (Global Positioning System), GLONASS, and Galileo systems are considered, and quantifying the Galileo contribution is one of the main objectives. The open source software RTKLib is adopted to process the data, with precise satellite orbits and clocks from CNES (Centre National d&rsquo
Application of learning pallets for real-time scheduling by the use of radial basis function network
2013
The expansion of the scope and scale of products in the current business environments causes a continuous increase in complexity of logistics activities. In order to deal with this challenge in planning and control of logistics activities, several solutions have been introduced. One of the most latest one is the application of autonomy. The paradigm of autonomy in inbound logistics, can be reflected in decisions for real-time scheduling and control of material flows. Integration of autonomous control with material carrier objects can realize the expected advantages of this alternative into shop-floors. Since pallets (bins, fixtures, etc.) are some common used carrier objects in logistics, t…
Evaluation of Epigenetic and Radiomodifying Effects during Radiotherapy Treatments in Zebrafish
2021
Radiotherapy is still a long way from personalizing cancer treatment plans, and its effectiveness depends on the radiosensitivity of tumor cells. Indeed, therapies that are efficient and successful for some patients may be relatively ineffective for others. Based on this, radiobiological research is focusing on the ability of some reagents to make cancer cells more responsive to ionizing radiation, as well as to protect the surrounding healthy tissues from possible side effects. In this scenario, zebrafish emerged as an effective model system to test for radiation modifiers that can potentially be used for radiotherapeutic purposes in humans. The adoption of this experimental organism is fu…
Elastic scattering studies of 16C at 50 MeV/A on proton and deuteron targets with the CHIMERA multidetector at INFN-LNS
2012
At the Laboratori Nazionali del Sud (LNS) in Catania (Italy), light radioactive ion beams have been produced through the In Flight Fragmentation method, using 18O and 13C at 55 MeV/A as primary beams impinging on a 9Be production target. Elastic scattering angular distributions of 16C+p and 16C+d at 50 MeV/A, 10Be+p at 56 MeV/A and 13B+d at 52 MeV/A systems were measured by using the CHIMERA (Charge Heavy Ion Mass and Energy Resolving Array) multidetector and kinematical coincidence technique. The experimental data are fitted by using the optical model. © Published under licence by IOP Publishing Ltd.
A complementary laser system for ISOLDE RILIS
2011
The Resonance Ionization Laser Ion Source (RILIS) is a powerful tool for efficient and selective production of radioactive ion beams at Isotope Separator On Line (ISOL) facilities. To avoid isobaric background, highly selective stepwise resonant ionization is applied, using up to three different laser wavelengths. Due to their advantages in terms of stability and reliability, an all solid-state titanium:sapphire (Ti:Sa) system is used or is planned to be installed at the majority of on-line facilities worldwide. Such an all solid-state Ti:Sa laser system is going to be installed at the ISOLDE RILIS at CERN alongside the well-established dye laser system.
Estimation of Personalized Minimal Purkinje Systems From Human Electro-Anatomical Maps
2021
The Purkinje system is a heart structure responsible for transmitting electrical impulses through the ventricles in a fast and coordinated way to trigger mechanical contraction. Estimating a patient-specific compatible Purkinje Network from an electro-anatomical map is a challenging task, that could help to improve models for electrophysiology simulations or provide aid in therapy planning, such as radiofrequency ablation. In this study, we present a methodology to inversely estimate a Purkinje network from a patient's electro-anatomical map. First, we carry out a simulation study to assess the accuracy of the method for different synthetic Purkinje network morphologies and myocardial junct…
A fully automatic approach for multimodal PET and MR image segmentation in gamma knife treatment planning
2017
The aim of this study is to combine Biological Target Volume (BTV) segmentation and Gross Target Volume (GTV) segmentation in stereotactic neurosurgery.Our goal is to enhance Clinical Target Volume (CTV) definition, including metabolic and morphologic information, for treatment planning and patient follow-up.We propose a fully automatic approach for multimodal PET and MR image segmentation. This method is based on the Random Walker (RW) and Fuzzy C-Means clustering (FCM) algorithms. A total of 19 brain metastatic tumors, undergone stereotactic neuro-radiosurgery, were retrospectively analyzed. A framework for the evaluation of multimodal PET/MRI segmentation is presented, considering volume…
Second-order tensorial calibration for kinetic spectrophotometric determination
1996
Abstract Kinetic-diode array spectrophotometric detection, as well as other multichannel techniques when used in non-equilibrium conditions, constitute second-order instrumentation. The second-order response provided will be bilinear, under certain conditions even trilinear, thus allowing the use of the generalized rank annihilation method (GRAM) and the trilinear decomposition method (TLD). Both numerically simulated and experimental data were used to evaluate the performance of these calibration techniques. The conditions in which the ‘second-order advantage’ (the possibility of quantifying the analytes in the presence of unknown reactions or interferences) is preserved were investigated.…
Low-Rank Tucker-2 Model for Multi-Subject fMRI Data Decomposition with Spatial Sparsity Constraint
2022
Tucker decomposition can provide an intuitive summary to understand brain function by decomposing multi-subject fMRI data into a core tensor and multiple factor matrices, and was mostly used to extract functional connectivity patterns across time/subjects using orthogonality constraints. However, these algorithms are unsuitable for extracting common spatial and temporal patterns across subjects due to distinct characteristics such as high-level noise. Motivated by a successful application of Tucker decomposition to image denoising and the intrinsic sparsity of spatial activations in fMRI, we propose a low-rank Tucker-2 model with spatial sparsity constraint to analyze multi-subject fMRI dat…