Search results for "Computer Science"

showing 10 items of 22367 documents

Gut-CNS-Axis as Possibility to Modulate Inflammatory Disease Activity-Implications for Multiple Sclerosis.

2017

In the last decade the role of environmental factors as modulators of disease activity and progression has received increasing attention. In contrast to classical environmental modulators such as exposure to sun-light or fine dust pollution, nutrition is an ideal tool for a personalized human intervention. Various studies demonstrate a key role of dietary factors in autoimmune diseases including Inflammatory Bowel Disease (IBD), rheumatoid arthritis or inflammatory central nervous system (CNS) diseases such as Multiple Sclerosis (MS). In this review we discuss the connection between diet and inflammatory processes via the gut–CNS-axis. This axis describes a bi-directional communication syst…

0301 basic medicineCentral Nervous SystemMultiple SclerosisCentral nervous systemInflammationReviewBiologyInflammatory bowel diseaseModels BiologicalCatalysisInorganic ChemistryDisease activitylcsh:Chemistry03 medical and health sciencesImmune systemmedicinemicrobiotaAnimalsHumansPhysical and Theoretical ChemistryMolecular Biologylcsh:QH301-705.5SpectroscopyInflammationMultiple sclerosisOrganic ChemistryGeneral Medicinemedicine.diseaseComputer Science ApplicationsGastrointestinal Tractgut–CNS-axisimmune system030104 developmental biologymedicine.anatomical_structurenutritionlcsh:Biology (General)lcsh:QD1-999Rheumatoid arthritisAdjunctive treatmentImmunologymedicine.symptomInternational journal of molecular sciences
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26th Annual Computational Neuroscience Meeting (CNS*2017): Part 2

2017

International audience; No abstract available

0301 basic medicineCerebellumComputer science[SDV]Life Sciences [q-bio]General Neurosciencelcsh:QP351-495Meeting Abstractslcsh:RC321-57103 medical and health sciencesCellular and Molecular Neurosciencelcsh:Neurophysiology and neuropsychology030104 developmental biologymedicine.anatomical_structuremedicineNeuronlcsh:Neurosciences. Biological psychiatry. NeuropsychiatryNeuroscienceComputingMilieux_MISCELLANEOUScomputational neuroscienceBMC Neuroscience
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The Importance of Cerebellar Connectivity on Simulated Brain Dynamics

2020

The brain shows a complex multiscale organization that prevents a direct understanding of how structure, function and dynamics are correlated. To date, advances in neural modeling offer a unique opportunity for simulating global brain dynamics by embedding empirical data on different scales in a mathematical framework. The Virtual Brain (TVB) is an advanced data-driven model allowing to simulate brain dynamics starting from individual subjects' structural and functional connectivity obtained, for example, from magnetic resonance imaging (MRI). The use of TVB has been limited so far to cerebral connectivity but here, for the first time, we have introduced cerebellar nodes and interconnecting…

0301 basic medicineCerebellumEmpirical dataComputer scienceThe Virtual Brainlcsh:RC321-57103 medical and health sciencesFunctional brainCellular and Molecular Neuroscience0302 clinical medicinemultiscale approachbrain dynamicsmedicineFunctional connectomestructural connectivitylcsh:Neurosciences. Biological psychiatry. NeuropsychiatryComputingMilieux_MISCELLANEOUSOriginal ResearchSignal processingFunctional connectivity[SCCO.NEUR]Cognitive science/Neurosciencefunctional connectivity030104 developmental biologyBrain statemedicine.anatomical_structureDynamics (music)Neuroscience030217 neurology & neurosurgeryNeurosciencecerebro-cerebellar loopFrontiers in Cellular Neuroscience
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The Hidden Charm of Life

2019

Synthetic biology is an engineering view on biotechnology, which has revolutionized genetic engineering. The field has seen a constant development of metaphors that tend to highlight the similarities of cells with machines. I argue here that living organisms, particularly bacterial cells, are not machine-like, engineerable entities, but, instead, factory-like complex systems shaped by evolution. A change of the comparative paradigm in synthetic biology from machines to factories, from hardware to software, and from informatics to economy is discussed.

0301 basic medicineCharm (programming language)Computer scienceengineeringComplex system050905 science studiesliving systemGeneral Biochemistry Genetics and Molecular BiologyField (computer science)03 medical and health sciencesSynthetic biologyLiving systemEngineeringlcsh:ScienceEcology Evolution Behavior and SystematicsSynthetic biology05 social sciencesPaleontologyData science030104 developmental biologySpace and Planetary ScienceInformaticsPerspectivelcsh:Qsynthetic biology0509 other social sciencesBiotechnologybiotechnologyLife
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2020

The periodontal ligament (PDL) is exposed to different kinds of mechanical stresses such as bite force or orthodontic tooth movement. A simple and efficient model to study molecular responses to mechanical stress is the application of compressive force onto primary human periodontal ligament fibroblasts via glass disks. Yet, this model suffers from the need for primary cells from human donors which have a limited proliferative capacity. Here we show that an immortalized cell line, PDL-hTERT, derived from primary human periodontal ligament fibroblasts exhibits characteristic responses to glass disk-mediated compressive force resembling those of primary cells. These responses include inductio…

0301 basic medicineChemistryAngiogenesisOrganic Chemistry030206 dentistryGeneral MedicineTransfectionCatalysisComputer Science ApplicationsCell biologyInorganic Chemistry03 medical and health sciences030104 developmental biology0302 clinical medicineCell cultureExtracellularPeriodontal fiberSecretionPhysical and Theoretical ChemistryPrimary cellMolecular BiologyImmortalised cell lineSpectroscopyInternational Journal of Molecular Sciences
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Immune response to tick-borne hemoparasites: Host adaptive immune response mechanisms as potential targets for therapies and vaccines

2020

This article belongs to the Section Molecular Immunology.

0301 basic medicineChemokine030106 microbiologyReviewAdaptive ImmunityBiologyCatalysisEpitopeInorganic Chemistry03 medical and health sciencesImmune systemAntigenmedicineAnimalsHumansCytotoxic T cellPhysical and Theoretical ChemistryAntigensMolecular BiologySpectroscopyVaccinesHost Microbial InteractionsEffectorOrganic ChemistryGeneral MedicineT helper cellAcquired immune systemTick-borne hemoparasitesComputer Science Applications030104 developmental biologymedicine.anatomical_structureAdaptive immune response Antigens Tick-borne hemoparasitesTick-Borne DiseasesImmunologybiology.proteinAdaptive immune response
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Proton Leakage Is Sensed by IM30 and Activates IM30-Triggered Membrane Fusion

2020

The inner membrane-associated protein of 30 kDa (IM30) is crucial for the development and maintenance of the thylakoid membrane system in chloroplasts and cyanobacteria. While its exact physiological function still is under debate, it has recently been suggested that IM30 has (at least) a dual function, and the protein is involved in stabilization of the thylakoid membrane as well as in Mg2+-dependent membrane fusion. IM30 binds to negatively charged membrane lipids, preferentially at stressed membrane regions where protons potentially leak out from the thylakoid lumen into the chloroplast stroma or the cyanobacterial cytoplasm, respectively. Here we show in vitro that IM30 membrane binding…

0301 basic medicineChloroplastsMembrane lipidsmembrane fusionMg2+CyanobacteriaThylakoidsCatalysisArticleVipp1Inorganic Chemistrylcsh:Chemistry03 medical and health sciencesMembrane Lipidsquartz crystal microbalanceProtein structureBacterial ProteinsPhysical and Theoretical ChemistryMg<sup>2+</sup>membrane bindingMolecular Biologylcsh:QH301-705.5SpectroscopyMembranes030102 biochemistry & molecular biologyChemistrypHOrganic ChemistrySynechocystisCD spectroscopyLipid bilayer fusionMembrane Proteinsfood and beveragesGeneral Medicinethylakoid membraneComputer Science ApplicationsChloroplastChloroplast stroma030104 developmental biologyMembranelcsh:Biology (General)lcsh:QD1-999CytoplasmThylakoidBiophysicsProtonsIM30Protein BindingInternational Journal of Molecular Sciences
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2021

Every organism has an intrinsic biological rhythm that orchestrates biological processes in adjusting to daily environmental changes. Circadian rhythms are maintained by networks of molecular clocks throughout the core and peripheral tissues, including immune cells, blood vessels, and perivascular adipose tissues. Recent findings have suggested strong correlations between the circadian clock and cardiovascular diseases. Desynchronization between the circadian rhythm and body metabolism contributes to the development of cardiovascular diseases including arteriosclerosis and thrombosis. Circadian rhythms are involved in controlling inflammatory processes and metabolisms, which can influence t…

0301 basic medicineCircadian clockAdipose tissueInflammationCatalysisInorganic Chemistry03 medical and health sciences0302 clinical medicineImmune systemmedicineCircadian rhythmPhysical and Theoretical ChemistryMolecular BiologySpectroscopybusiness.industryOrganic ChemistryGeneral MedicineArteriosclerosismedicine.diseaseThrombosisComputer Science ApplicationsCLOCK030104 developmental biologymedicine.symptombusinessNeuroscience030217 neurology & neurosurgeryInternational Journal of Molecular Sciences
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Disease–Genes Must Guide Data Source Integration in the Gene Prioritization Process

2019

One of the main issues in detecting the genes involved in the etiology of genetic human diseases is the integration of different types of available functional relationships between genes. Numerous approaches exploited the complementary evidence coded in heterogeneous sources of data to prioritize disease-genes, such as functional profiles or expression quantitative trait loci, but none of them to our knowledge posed the scarcity of known disease-genes as a feature of their integration methodology. Nevertheless, in contexts where data are unbalanced, that is, where one class is largely under-represented, imbalance-unaware approaches may suffer a strong decrease in performance. We claim that …

0301 basic medicineClass (computer programming)Boosting (machine learning)Computer scienceProcess (engineering)media_common.quotation_subjectComputational biologyScarcity03 medical and health sciencesComputingMethodologies_PATTERNRECOGNITION030104 developmental biologyExpression quantitative trait lociKey (cryptography)Feature (machine learning)Gene prioritizationmedia_common
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2016

Focal demyelinated lesions, diffuse white matter (WM) damage and grey matter (GM) atrophy influence directly the disease progression in patients with multiple sclerosis. The aim of this study was to identify specific characteristics of GM and WM structural networks in subjects with clinically isolated syndrome (CIS) in comparison to patients with early relapsing-remitting multiple sclerosis (RRMS). Twenty patients with CIS, thirty three with RRMS and forty healthy subjects were investigated using 3 T-MRI. Diffusion tensor imaging was applied, together with probabilistic tractography and fractional anisotropy (FA) maps for WM and cortical thickness correlation analysis for GM, to determine t…

0301 basic medicineClinically isolated syndromeComputer scienceGeneral NeuroscienceMultiple sclerosisGrey mattermedicine.diseaseWhite matter03 medical and health sciences030104 developmental biology0302 clinical medicinemedicine.anatomical_structureFractional anisotropymedicineCluster analysisNeuroscience030217 neurology & neurosurgeryDiffusion MRIClustering coefficientFrontiers in Neuroscience
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