Search results for "Computer simulation"

showing 10 items of 1054 documents

Critical comments on EEG sensor space dynamical connectivity analysis

2019

Many different analysis techniques have been developed and applied to EEG recordings that allow one to investigate how different brain areas interact. One particular class of methods, based on the linear parametric representation of multiple interacting time series, is widely used to study causal connectivity in the brain. However, the results obtained by these methods should be interpreted with great care. The goal of this paper is to show, both theoretically and using simulations, that results obtained by applying causal connectivity measures on the sensor (scalp) time series do not allow interpretation in terms of interacting brain sources. This is because (1) the channel locations canno…

FOS: Computer and information sciencesComputer scienceSocial SciencesTransfer functionStatistics - Applications050105 experimental psychology03 medical and health sciences0302 clinical medicinegranger causalityMVARHumansApplications (stat.AP)Computer Simulation0501 psychology and cognitive sciencesRadiology Nuclear Medicine and imagingBrain connectivityEEGTime domainSpurious relationshipRepresentation (mathematics)Mixing (physics)Parametric statisticsBrain MappingRadiological and Ultrasound TechnologySeries (mathematics)05 social sciencesbrain connectivitysource modellingElectroencephalographyNeurologyFOS: Biological sciencesFrequency domainQuantitative Biology - Neurons and CognitionSettore ING-INF/06 - Bioingegneria Elettronica E InformaticaGranger causalityDirected transfer functionNeurons and Cognition (q-bio.NC)Neurology (clinical)AnatomyAlgorithm030217 neurology & neurosurgery
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Multiscale analysis of information dynamics for linear multivariate processes.

2016

In the study of complex physical and physiological systems represented by multivariate time series, an issue of great interest is the description of the system dynamics over a range of different temporal scales. While information-theoretic approaches to the multiscale analysis of complex dynamics are being increasingly used, the theoretical properties of the applied measures are poorly understood. This study introduces for the first time a framework for the analytical computation of information dynamics for linear multivariate stochastic processes explored at different time scales. After showing that the multiscale processing of a vector autoregressive (VAR) process introduces a moving aver…

FOS: Computer and information sciencesInformation transferMultivariate statisticsMultivariate analysisComputer scienceComputer Science - Information Theory0206 medical engineeringStochastic ProcesseBiomedical EngineeringFOS: Physical sciencesInformation Storage and RetrievalHealth Informatics02 engineering and technology01 natural sciencesEntropy (classical thermodynamics)Moving average0103 physical sciencesEntropy (information theory)Computer SimulationStatistical physicsEntropy (energy dispersal)Time series010306 general physicsEntropy (arrow of time)Multivariate Analysi1707Stochastic ProcessesEntropy (statistical thermodynamics)Stochastic processInformation Theory (cs.IT)Probability and statisticsModels Theoretical020601 biomedical engineeringComplex dynamicsAutoregressive modelPhysics - Data Analysis Statistics and ProbabilitySignal ProcessingSettore ING-INF/06 - Bioingegneria Elettronica E InformaticaMultivariate AnalysisData Analysis Statistics and Probability (physics.data-an)Entropy (order and disorder)Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference
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A comparative analysis of the statistical properties of large mobile phone calling networks.

2014

Mobile phone calling is one of the most widely used communication methods in modern society. The records of calls among mobile phone users provide us a valuable proxy for the understanding of human communication patterns embedded in social networks. Mobile phone users call each other forming a directed calling network. If only reciprocal calls are considered, we obtain an undirected mutual calling network. The preferential communication behavior between two connected users can be statistically tested and it results in two Bonferroni networks with statistically validated edges. We perform a comparative analysis of the statistical properties of these four networks, which are constructed from …

FOS: Computer and information sciencesPhysics - Physics and SocietyChinaComputer scienceFOS: Physical sciencesInformation Storage and RetrievalPhysics and Society (physics.soc-ph)ArticleSocial NetworkingComputer Communication NetworksSocio-technical systemsComputer SimulationProxy (statistics)Human communicationStatisticSocial and Information Networks (cs.SI)MultidisciplinaryModels StatisticalSocial networkbusiness.industryStatistical physicComputer Science - Social and Information NetworksNonlinear phenomenaComplex networkSettore FIS/07 - Fisica Applicata(Beni Culturali Ambientali Biol.e Medicin)Mobile phonebusinessTelecommunicationsCell PhoneScientific reports
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Large-scale compression of genomic sequence databases with the Burrows-Wheeler transform

2012

Motivation The Burrows-Wheeler transform (BWT) is the foundation of many algorithms for compression and indexing of text data, but the cost of computing the BWT of very large string collections has prevented these techniques from being widely applied to the large sets of sequences often encountered as the outcome of DNA sequencing experiments. In previous work, we presented a novel algorithm that allows the BWT of human genome scale data to be computed on very moderate hardware, thus enabling us to investigate the BWT as a tool for the compression of such datasets. Results We first used simulated reads to explore the relationship between the level of compression and the error rate, the leng…

FOS: Computer and information sciencesStatistics and ProbabilityBurrows–Wheeler transformComputer scienceData_CODINGANDINFORMATIONTHEORYBurrows-Wheeler transformcomputer.software_genreBiochemistryBurrows-Wheeler transform; Data Compression; Next-generation sequencingComputer Science - Data Structures and AlgorithmsEscherichia coliCode (cryptography)HumansOverhead (computing)Data Structures and Algorithms (cs.DS)Computer SimulationQuantitative Biology - GenomicsMolecular BiologyGenomics (q-bio.GN)Genome HumanString (computer science)Search engine indexingSortingGenomicsSequence Analysis DNAConstruct (python library)Data CompressionComputer Science ApplicationsComputational MathematicsComputational Theory and MathematicsFOS: Biological sciencesNext-generation sequencingData miningDatabases Nucleic AcidcomputerAlgorithmsData compression
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A rule‐based method to model myocardial fiber orientation in cardiac biventricular geometries with outflow tracts

2019

Rule-based methods are often used for assigning fiber orientation to cardiac anatomical models. However, existing methods have been developed using data mostly from the left ventricle. As a consequence, fiber information obtained from rule-based methods often does not match histological data in other areas of the heart such as the right ventricle, having a negative impact in cardiac simulations beyond the left ventricle. In this work, we present a rule-based method where fiber orientation is separately modeled in each ventricle following observations from histology. This allows to create detailed fiber orientation in specific regions such as the endocardium of the right ventricle, the inter…

FOS: Computer and information sciencesmedicine.medical_specialtyHeart VentriclesBiomedical EngineeringFOS: Physical sciencesVolume mesh030204 cardiovascular system & hematology[INFO.INFO-AI]Computer Science [cs]/Artificial Intelligence [cs.AI]030218 nuclear medicine & medical imagingComputational Engineering Finance and Science (cs.CE)03 medical and health sciences0302 clinical medicineRule-based methodInternal medicine[INFO.INFO-IM]Computer Science [cs]/Medical ImagingmedicineHumansComputer SimulationElectrophysiological simulationsInterventricular septumOutflow tractComputer Science - Computational Engineering Finance and ScienceMolecular BiologyEndocardiumFiber (mathematics)Orientation (computer vision)MyocardiumApplied MathematicsFiber orientationOutflow tract ventricular arrhythmiaModels CardiovascularRule-based systemSeptumMagnetic Resonance Imaging[INFO.INFO-MO]Computer Science [cs]/Modeling and SimulationPhysics - Medical PhysicsElectrophysiological Phenomenamedicine.anatomical_structureComputational Theory and MathematicsVentricleModeling and Simulationcardiovascular systemCardiologyOutflowMedical Physics (physics.med-ph)SoftwareGeologyInternational Journal for Numerical Methods in Biomedical Engineering
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Fast Estimation of Diffusion Tensors under Rician noise by the EM algorithm

2016

Diffusion tensor imaging (DTI) is widely used to characterize, in vivo, the white matter of the central nerve system (CNS). This biological tissue contains much anatomic, structural and orientational information of fibers in human brain. Spectral data from the displacement distribution of water molecules located in the brain tissue are collected by a magnetic resonance scanner and acquired in the Fourier domain. After the Fourier inversion, the noise distribution is Gaussian in both real and imaginary parts and, as a consequence, the recorded magnitude data are corrupted by Rician noise. Statistical estimation of diffusion leads a non-linear regression problem. In this paper, we present a f…

FOS: Computer and information sciencesreduced computationGaussianModels NeurologicalDatasets as Topicta3112Statistics - ComputationStatistics - ApplicationsTime030218 nuclear medicine & medical imagingMethodology (stat.ME)Diffusion03 medical and health sciencessymbols.namesake0302 clinical medicineScoring algorithmRician fadingPrior probabilityExpectation–maximization algorithmImage Processing Computer-AssistedMaximum a posteriori estimationHumansApplications (stat.AP)Computer SimulationComputation (stat.CO)Statistics - MethodologyMathematicsta112Likelihood FunctionsGeneral NeuroscienceBrainEstimatormaximum likelihood estimatorFisher scoringMagnetic Resonance ImagingWhite MatterRician likelihoodDiffusion Tensor ImagingFourier transformNonlinear Dynamicssymbolsmaximum a posteriori estimatorAlgorithmAlgorithms030217 neurology & neurosurgerydata augmentation
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Towards Tool Path Numerical Simulation in Modified Friction Stir Spot Welding Processes

2009

Spot welding can be considered a very common joining technique in automotive and transportation industries as it permits to obtain effective lap-joints with short process times and what is more it is easily developed through robots and automated systems. Recently the Friction Stir Spot Welding (FSSW) process has been proposed as a natural evolution of the already known Friction Stir Welding (FSW) process, allowing to obtain sound spot joints that do not suffer from the insurgence of typical welding defects due to the fusion of the base material. In the paper, a modified Friction Stir Spot Welding (FSSW) process, with a spiral circular movement given to the tool after the sinking stage, is p…

FSSW FEMEngineeringComputer simulationbusiness.industryMetallurgyGeneral EngineeringMechanical engineeringRecrystallization (metallurgy)WeldingStrain ratelaw.inventionRobot weldinglawFriction stir weldingFriction weldingbusinessSettore ING-IND/16 - Tecnologie E Sistemi Di LavorazioneSpot weldingAdvanced Materials Research
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Directed Assembly of Soft Colloids through Rapid Solvent Exchange

2015

We studied the directed assembly of soft nanoparticles through rapid micromixing of polymers in solution with a nonsolvent. Both experiments and computer simulations were performed to elucidate the underlying physics and to investigate the role of various process parameters. In particular, we discovered that no external stabilizing agents or charged end groups are required to keep the colloids separated from each other when water is used as the nonsolvent. Furthermore, the size of the nanoparticles can be reliably tuned through the mixing rate and the ratio between polymer solution and nonsolvent. Our results demonstrate that this mechanism is highly promising for the mass fabrication of un…

FabricationMaterials scienceMixing (process engineering)General Physics and AstronomyNanoparticleNanotechnology02 engineering and technology010402 general chemistry01 natural sciencesColloidComputer SimulationGeneral Materials ScienceColloidsParticle Sizechemistry.chemical_classificationGeneral EngineeringWaterPolymer021001 nanoscience & nanotechnology0104 chemical sciencesMicromixingSolutionsSolventKineticsModels ChemicalchemistryColloidal particleNanoparticlesPolystyrenesThermodynamics0210 nano-technologyACS Nano
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Theoretical and Experimental Studies on the Influence of Process Parameters on Strains and Forces of Single Point Incremental Forming

2014

These paper aims to determine the influence of the most important geometrical parameters (vertical step and punch diameter) on the main strains, thickness reduction and the forces along two directions during the single point incremental forming process (SPIF). The paper comprises a comparative numericalexperimental study, for a simple geometry part obtained by incremental forming. In fact, in the first stage, the punch has a vertical motion with the value of one vertical step. In the second stage, the punch follows a linear trajectory along one side of the die. After each linear trajectory the punch has successive vertical motions, taking one vertical step at a time until the entire geometr…

FactorialEngineeringbusiness.product_categoryComputer simulationbusiness.industryGeneral EngineeringProcess (computing)Forming processesGeometryStructural engineeringTrajectoryDie (manufacturing)Single pointReduction (mathematics)businessMathematicsofComputing_DISCRETEMATHEMATICSAdvanced Materials Research
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Assessing causality in brain dynamics and cardiovascular control

2013

Understanding how different cerebral areas interact to produce an integrated behaviour and disentangling the mechanisms that contribute to cardiovascular control are two of the major challenges of brain and cardiovascular neuroscience. The increasing availability of simultaneous continuous

Feedback PhysiologicalCognitive scienceIntroductionComputer scienceGeneral MathematicsGeneral EngineeringBrainGeneral Physics and AstronomyHeartCardiovascular controlModels BiologicalCausality (physics)EngineeringPhysics and AstronomyMathematics; Engineering; Physics and AstronomySettore ING-INF/06 - Bioingegneria Elettronica E InformaticaAnimalsHumansComputer SimulationNerve NetAlgorithmsMathematic
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