Search results for "Computing"

showing 10 items of 25279 documents

Plant genes involved in arbuscular mycorrhiza formation and functioning

2002

Knowledge about that part of the plant genome involved in the establishment and functioning of the arbuscular mycorrhizal (AM) symbiosis is important for the basic understanding of this symbiosis. It is also essential for a ‘genes to the field’ approach based on the identification and exploitation of genes that could be central to developing sustainable plant production systems in the future.

0106 biological sciences0303 health sciencesbiologybusiness.industry[SDV]Life Sciences [q-bio]biology.organism_classification01 natural sciencesGenomeBiotechnologyArbuscular mycorrhiza[SDV] Life Sciences [q-bio]03 medical and health sciencesSymbiosisBotanyREPONSE DE LA PLANTEIdentification (biology)Arbuscular mycorrhizalbusinessPlant genesGeneFunctional genomicsComputingMilieux_MISCELLANEOUS030304 developmental biology010606 plant biology & botany
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Drosophila Evolution over Space and Time (DEST) - A New Population Genomics Resource

2021

Abstract Drosophila melanogaster is a leading model in population genetics and genomics, and a growing number of whole-genome datasets from natural populations of this species have been published over the last 20 years. A major challenge is the integration of these disparate datasets, often generated using different sequencing technologies and bioinformatic pipelines, which hampers our ability to address questions about the evolution and population structure of this species. Here we address these issues by developing a bioinformatics pipeline that maps pooled sequencing (Pool-Seq) reads from D. melanogaster to a hologenome consisting of fly and symbiont genomes and estimates allele frequenc…

0106 biological sciences0303 health scienceseducation.field_of_studyPopulationPopulation geneticsGenomicsGenome browserComputational biologyInformation repositoryBiology010603 evolutionary biology01 natural sciencesGenome03 medical and health sciencesComputingMethodologies_PATTERNRECOGNITIONHologenome theory of evolutionEvolutionary dynamicseducation030304 developmental biology
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Plant defense responses induced by arbuscular mycorrhizal fungi

2002

Plants in their environment daily face many organisms such as fungi, bacteria, mycoplasms, viruses, nematodes, etc. Many of them are potential pathogens; in fact thousands of microorganisms are known to cause plant diseases. Despite this large number of deleterious microorganisms, most of the plants are resistant to their attack since they have developed effective mechanisms to protect themselves.

0106 biological sciences2. Zero hunger0303 health sciences[SDV]Life Sciences [q-bio]MicroorganismfungiDefence mechanismsfood and beverages15. Life on landBiologybiology.organism_classificationArbuscular mycorrhizal fungi01 natural sciences[SDV] Life Sciences [q-bio]03 medical and health sciencesBotanyREPONSE DE LA PLANTEPlant defense against herbivoryComputingMilieux_MISCELLANEOUSBacteria030304 developmental biology010606 plant biology & botany
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Blackgrass (Alopecurus myosuroides Huds.) seed dispersal from a single plant and its consequences on weed infestation

2001

Blackgrass (Alopecurus myosuroides Huds.) seed dispersal from single mother-plants was studied in two experiments. For the first experiment, eight blackgrass plants of different heights and number of ears were produced in a greenhouse with the help of different in sowing densities and nitrogen nutrition levels. At the beginning of seed shedding, the plants were placed outside, and seeds were gathered daily. Daily seed dispersal was analysed by fitting a Weibull equation to the number of seeds as a function of distance to the mother-plant. The second experiment was carried out in a field comprising winter barley and spring barley plots as well as bare soil. In each of these three parts, two …

0106 biological sciences2. Zero hungerEcological ModelingSeed dispersalAlopecurus myosuroidesSowing04 agricultural and veterinary sciencesVULPIN DES CHAMPSBiologybiology.organism_classification01 natural sciencesCrop[SDE.BE] Environmental Sciences/Biodiversity and EcologyAgronomyGermination040103 agronomy & agriculture0401 agriculture forestry and fisheriesBiological dispersal[SDE.BE]Environmental Sciences/Biodiversity and EcologyWeedCover cropComputingMilieux_MISCELLANEOUS010606 plant biology & botany
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Editorial: Exploring Plant Rhizosphere, Phyllosphere and Endosphere Microbial Communities to Improve the Management of Polluted Sites

2021

International audience

0106 biological sciences2. Zero hungerMicrobiology (medical)[SDV.EE]Life Sciences [q-bio]/Ecology environmentRhizospherepolluted sitesmicrobial communities04 agricultural and veterinary sciences15. Life on land01 natural sciencesMicrobiologyQR1-502high-throughput sequencing technologiesEditorial13. Climate actionBotany040103 agronomy & agricultureplant growth promoting microorganisms (PGPM)0401 agriculture forestry and fisheriesEnvironmental sciencehighthroughput sequencing technologiesPhyllosphereplant inoculationComputingMilieux_MISCELLANEOUS010606 plant biology & botanyFrontiers in Microbiology
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Absorption, translocation and metabolism of pyridate in a tolerant crop (Zea mays) and two susceptible weeds (Polygonum lapathifolium L. and Chenopod…

1988

Summary Absorption, translocation and metabolism of 14C-pyridate were compared in tolerant maize. moderately susceptible Polygonum lapathifolium and susceptible Chenopodium album. Foliar absorption was limited in all species, but comparatively higher penetration levels were observed in younger leaves of dicotyledonous species. The absorbed radioactivity was not very mobile and translocation appeared mainly sym-plastic. Herbicide selectivity could not be explained on the basis of absorption and transport. Chenopodium and P. lapathifolium degraded pyridate and formed unstable water-soluble conjugates that easily released a phytotoxic metabolite. By contrast, more stable unidentified water-sol…

0106 biological sciences2. Zero hungerPolygonumbiologyChenopodiumChromosomal translocation04 agricultural and veterinary sciencesPlant ScienceMetabolism15. Life on landPOLYGONUM LAPATHIFOLIUM Lbiology.organism_classification01 natural sciencesZea maysBotany040103 agronomy & agriculture0401 agriculture forestry and fisheries[SDV.BV]Life Sciences [q-bio]/Vegetal Biology[SDV.BV] Life Sciences [q-bio]/Vegetal BiologyAgronomy and Crop ScienceClay soilEcology Evolution Behavior and SystematicsComputingMilieux_MISCELLANEOUS010606 plant biology & botany
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Arbuscular mycorrhizal fungi and micropropagation of high value crops

2002

Micropropagation has established its position as a way of propagating large numbers of uniform plants. For some plant species that are difficult to propagate by seeds or by conventional cuttings, this technique provides the only possible way of producing high quality plants. Micropropagation is widely used for propagation of high value crops like ornamentals, fruits, vegetables, plantation crops and spices (Vestberg and Estaun 1994). The micropropagation industry was growing fast in Europe up to 1992 (O’Riordain 1992) but after that the micropropagation industry seems to have stabilized its position although a slight increase in production of microplants was still recorded for the period 19…

0106 biological sciences2. Zero hunger[SDV]Life Sciences [q-bio]04 agricultural and veterinary sciences15. Life on landBiologyArbuscular mycorrhizal fungi01 natural sciences[SDV] Life Sciences [q-bio]HorticultureCuttingPrunusMicropropagationAgronomyOrnamental plant040103 agronomy & agriculturePlant species0401 agriculture forestry and fisheriesComputingMilieux_MISCELLANEOUS010606 plant biology & botany
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Activation of the plant plasma membrane H+ -ATPase. Is there a direct interaction between lysophosphatidylcholine and the C-terminal part of the enzy…

1996

The antagonistic effects of the fungal toxin beticolin-1 and of L-alpha-lysophosphatidylcholine (lysoPC) were investigated on the plasma membrane H+-ATPase of the plant Arabidopsis thaliana (isoform 2) expressed in yeast, using both wild-type enzyme (AHA2) and C-terminal truncated enzyme (aha2delta92). Phosphohydrolytic activities of both enzymes were inhibited by beticolin-1, with very similar 50% inhibitory concentrations, indicating that the toxin action does not involve the C-terminal located autoinhibitory domain of the proton pump. Egg lysoPC, a compound that activates the H+-ATPase by a mechanism involving the C-terminal part of the protein, was found to be able to reverse the inhibi…

0106 biological sciencesATPaseArabidopsismedicine.disease_cause01 natural sciencesBiochemistrychemistry.chemical_compoundStructural BiologyArabidopsis thalianaComputingMilieux_MISCELLANEOUSchemistry.chemical_classification0303 health sciencesbiologyPlantsRecombinant ProteinsIsoenzymesBeticolinProton-Translocating ATPasesLysophosphatidylcholineMembraneBiochemistryPlasma membrane H+-ATPase activationGene isoformAutoinhibitory domainDetergentsBiophysicsSaccharomyces cerevisiae[SDV.BC]Life Sciences [q-bio]/Cellular BiologyHeterocyclic Compounds 4 or More RingsStructure-Activity Relationship03 medical and health sciencesGeneticsmedicine[SDV.BC] Life Sciences [q-bio]/Cellular BiologyMolecular Biology030304 developmental biologyBinding SitesToxinCell MembraneLysophosphatidylcholinesCell BiologyMycotoxinsbiology.organism_classificationYeastEnzyme Activationl-α-LysophosphatidylcholineEnzymechemistryLiposomesbiology.protein010606 plant biology & botany
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Functional reconstitution of a proton-translocating system responsive to fusicoccin

1988

Crude fusicoccin binding proteins and a partially purified plasma membrane H+-transporting ATPase (EC 3.6.1.34), both solubilized from maize tissues, were simultaneously inserted into liposomes by the freeze-thaw method. ATP-driven intravesicular acidification in the proteoliposomes, measured by the fluorescence quenching of the dye 9-amino-6-chloro-2-methoxyacridine, markedly increased upon addition of fusicoccin to the reconstituted system. This effect could not be observed when binding sites and ATPase preparations were separately reconstituted into the proteoliposomes, thus demonstrating that fusicoccin binding to its receptor is a prerequisite for ATPase stimulation.

0106 biological sciencesATPase[SDV]Life Sciences [q-bio]01 natural sciences03 medical and health scienceschemistry.chemical_compoundProton transportGlycosidesBinding siteComputingMilieux_MISCELLANEOUSFluorescent Dyes030304 developmental biologychemistry.chemical_classification0303 health sciencesLiposomeBinding SitesMultidisciplinarybiologyAminoacridinesCell MembraneBiological activityPlants[SDV] Life Sciences [q-bio]Proton-Translocating ATPasesMembraneEnzymeSolubilitychemistryBiochemistryFusicoccinLiposomesbiology.proteinResearch Article010606 plant biology & botany
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A secondary mode of action of the herbicide lenacil: Modification of K+ permeability of Acer pseudoplatanus cells

1984

Abstract The action of lenacil on plasmalemma permeability to K+, transmembrane electric potential difference (PD) calculated from the tetraphenylphosphonium distribution, proton extrusion and intracellular pH of Acer pseudoplatanus cells calculated from the 5,5-dimethyloxazolidine,4-dione distribution, was studied and compared with the action of fusicoccin (FC) and diethylstilbestrol (DES). The three compounds temporarily stimulated the rate of 86Rb+ uptake with a half-maximum effect at 5.0 μM for 3-cyclohexyl-6, 7-dihdro-1H-cyclopentapyrimidine-2,4(3H,5H)-dione (lenacil). Lenacil and FC had no action on transmembrane electric potential difference, whereas DES decreased it. Lenacil inhibit…

0106 biological sciencesAbsorption (pharmacology)Stereochemistry[SDV]Life Sciences [q-bio]Intracellular pHKineticsSoil Science01 natural sciences03 medical and health scienceschemistry.chemical_compoundMode of actionComputingMilieux_MISCELLANEOUS030304 developmental biologyMembrane potential0303 health sciencesbiologyChemistryERABLE FAUX PLATANEAcer pseudoplatanusbiology.organism_classification[SDV] Life Sciences [q-bio]Permeability (electromagnetism)FusicoccinBiophysicsAgronomy and Crop Science010606 plant biology & botanyPlant Science Letters
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