Search results for "ComputingMethodologies_PATTERNRECOGNITION"
showing 10 items of 296 documents
Graphical Workflow System for Modification Calling by Machine Learning of Reverse Transcription Signatures
2019
Modification mapping from cDNA data has become a tremendously important approach in epitranscriptomics. So-called reverse transcription signatures in cDNA contain information on the position and nature of their causative RNA modifications. Data mining of, e.g. Illumina-based high-throughput sequencing data, is therefore fast growing in importance, and the field is still lacking effective tools. Here we present a versatile user-friendly graphical workflow system for modification calling based on machine learning. The workflow commences with a principal module for trimming, mapping, and postprocessing. The latter includes a quantification of mismatch and arrest rates with single-nucleotide re…
Reinforcement learning in synthetic gene circuits.
2020
Synthetic gene circuits allow programming in DNA the expression of a phenotype at a given environmental condition. The recent integration of memory systems with gene circuits opens the door to their adaptation to new conditions and their re-programming. This lays the foundation to emulate neuromorphic behaviour and solve complex problems similarly to artificial neural networks. Cellular products such as DNA or proteins can be used to store memory in both digital and analog formats, allowing cells to be turned into living computing devices able to record information regarding their previous states. In particular, synthetic gene circuits with memory can be engineered into living systems to al…
Efficient Online Laplacian Eigenmap Computation for Dimensionality Reduction in Molecular Phylogeny via Optimisation on the Sphere
2019
Reconstructing the phylogeny of large groups of large divergent genomes remains a difficult problem to solve, whatever the methods considered. Methods based on distance matrices are blocked due to the calculation of these matrices that is impossible in practice, when Bayesian inference or maximum likelihood methods presuppose multiple alignment of the genomes, which is itself difficult to achieve if precision is required. In this paper, we propose to calculate new distances for randomly selected couples of species over iterations, and then to map the biological sequences in a space of small dimension based on the partial knowledge of this genome similarity matrix. This mapping is then used …
Perceptual and semantic familiarity in recognition memory: an event-related potential study
2008
Putative event-related potential correlates of perceptual and semantic bases of familiarity in recognition memory were examined with a categorized pictures recognition test. Our participants were presented, at study, with pictures of categorized objects and, at test, with either the very same pictures presented at study, different pictures of studied objects, pictures of new objects belonging to studied categories, or pictures of completely new-uncategorized objects. We found evidence for a parallel evaluation, within familiarity process, of both perceptual and semantic information. We also found new and interesting evidence for the existence of some common neural circuits involved in the F…
On spline methods of approximation under L-fuzzy information
2011
This work is closely related to our previous papers on algorithms of approximation under L-fuzzy information. In the classical theory of approximation central algorithms were worked out on the basis of usual, that is crisp splines. We describe central methods for solution of linear problems with balanced L-fuzzy information and develop the concept of L-fuzzy splines.
Sequential Mining Classification
2017
Sequential pattern mining is a data mining technique that aims to extract and analyze frequent subsequences from sequences of events or items with time constraint. Sequence data mining was introduced in 1995 with the well-known Apriori algorithm. The algorithm studied the transactions through time, in order to extract frequent patterns from the sequences of products related to a customer. Later, this technique became useful in many applications: DNA researches, medical diagnosis and prevention, telecommunications, etc. GSP, SPAM, SPADE, PrefixSPan and other advanced algorithms followed. View the evolution of data mining techniques based on sequential data, this paper discusses the multiple …
Hop: Histogram of patterns for human action representation
2017
This paper presents a novel method for representing actions in terms of multinomial distributions of frequent sequential patterns of different length. Frequent sequential patterns are series of data descriptors that occur many times in the data. This paper proposes to learn a codebook of frequent sequential patterns by means of an apriori-like algorithm, and to represent an action with a Bag-of-Frequent-Sequential-Patterns approach. Preliminary experiments of the proposed method have been conducted for action classification on skeletal data. The method achieves state-of-the-art accuracy value in cross-subject validation.
Automated and Online Eye Blink Artifact Removal from Electroencephalogram
2019
Eyeblink artifacts often contaminates electroencephalogram (EEG) signals, which could potentially confound EEG's interpretation. A lot offline methods are available to remove this artifact, but an online solution is required to remove eyeblink artifacts in near real time for EEG signal to be beneficial in applications such as brain computer interface, (BCI). In this work, approaches that combines unsupervised eyeblink artifact detection with Empirical Mode Decomposition (EMD) and Canonical Correlation Analysis (CCA) are proposed to automatically identify eyeblink artifacts and remove them in an online setting. The proposed approaches are analysed and evaluated in terms of artifact removal a…
A Segmentation System for Soccer Robot Based on Neural Networks
2000
An innovative technique for segmentation of color images is proposed. The technique implements an approach based on thresholding of the hue histogram and a feed-forward neural network that learns to recognize the hue ranges of meaningful objects. A new function for detecting valleys of the histogram has been devised and tested. A novel blurring algorithm for noise reduction that works effectively when used over hue image has been employed. The reported experimental results show that the technique is reliable and robust even in presence of changing environmental conditions. Extended experimentation has been carried on the framework of the Robot Soccer World Cup Initiative (RoboCup).
Speech Emotion Recognition method using time-stretching in the Preprocessing Phase and Artificial Neural Network Classifiers
2020
Human emotions are playing a significant role in the understanding of human behaviour. There are multiple ways of recognizing human emotions, and one of them is through human speech. This paper aims to present an approach for designing a Speech Emotion Recognition (SER) system for an industrial training station. While assembling a product, the end user emotions can be monitored and used as a parameter for adapting the training station. The proposed method is using a phase vocoder for time-stretching and an Artificial Neural Network (ANN) for classification of five typical different emotions. As input for the ANN classifier, features like Mel Frequency Cepstral Coefficients (MFCCs), short-te…