Search results for "Cripto"

showing 10 items of 863 documents

Global gene expression profiles in skeletal muscle of monozygotic female twins discordant for hormone replacement therapy

2010

Summary Aging is accompanied by inexorable loss of muscle tissue. One of the underlying causes for this is the massive change in the hormonal milieu of the body. The role of a female sex steroid – estrogen – in these processes is frequently neglected, although the rapid decline in its production coincides with a steep deterioration in muscle performance. We recruited 54- to 62-year-old monozygotic female twin pairs discordant for postmenopausal hormone replacement therapy (HRT, n = 11 pairs; HRT use 7.3 ± 3.7 years) from the Finnish Twin Cohort to investigate the association of long-term, estrogen-based HRT with skeletal muscle transcriptome. Pathway analysis of muscle transcript profiles r…

Muscle tissue0303 health sciencesAgingmedicine.medical_specialtymedicine.drug_classSkeletal muscleCell BiologyMetabolismBiologyMitochondrionTranscriptome03 medical and health sciences0302 clinical medicinemedicine.anatomical_structureEndocrinologyTransgender hormone therapyEstrogenInternal medicinemedicine030217 neurology & neurosurgery030304 developmental biologyHormoneAging Cell
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Transcriptome comparison of murine wild-type and synaptophysin-deficient retina reveals complete identity

2005

Loss of synaptophysin, one of the major synaptic vesicle membrane proteins, is surprisingly well tolerated in knockout mice. To test whether compensatory gene transcription accounts for the apparent lack of functional deficiencies, comparative transcriptome analyses were carried out. The retina was selected as the most suitable tissue since morphological alterations were observed in mutant photoreceptors, most notably a reduction of synaptic vesicles and concomitant increase in clathrin-coated vesicles. Labeled cRNA was prepared in triplicate from retinae of age- and sex-matched wild-type and mutant litter mates and hybridized to high-density microarray chips. Only three differentially expr…

MutantSynaptophysinSynaptic vesicleRetinaTranscriptomeMiceMicroscopy Electron TransmissionGene expressionAnimalsPhotoreceptor CellsRNA MessengerEye ProteinsMolecular BiologyMice KnockoutbiologyReverse Transcriptase Polymerase Chain ReactionSynaptic vesicle membraneGeneral NeuroscienceWild typeGlucan 13-beta-GlucosidaseMicroarray AnalysisMolecular biologyClathrinMice Inbred C57BLGene Expression RegulationKnockout mouseSynaptophysinbiology.proteinSynaptic VesiclesNeurology (clinical)Developmental BiologyBrain Research
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A novel neural stem cell-derived immunocompetent mouse model of glioblastoma for preclinical studies

2020

AbstractGlioblastomas are the most lethal tumors affecting the central nervous system in adults. Simple and inexpensive syngeneicin vivomodels that closely mirror human glioblastoma, including interactions between tumor and immune cells, are urgently needed for deciphering glioma biology and developing more effective treatments. Here, we generated glioblastoma cell lines by repeatedin-vivopassaging of cells isolated from a neural stem cell-specific Pten/p53 double-knockout genetic mouse brain tumor model. Transcriptome and genome analyses of the cell lines revealed molecular heterogeneity comparable to that observed in human glioblastoma. Upon orthotopic transplantation into syngeneic hosts…

MyeloidCellBrain tumorBiologymedicine.diseaseNeural stem cellnervous system diseasesTranscriptomemedicine.anatomical_structureCell cultureGliomamedicineCancer researchbiology.proteinPTENneoplasms
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Extraction and fusion of spectral parameters for face recognition

2011

This is the copy of journal's version originally published in Proc. SPIE 7877: http://spie.org/x10.xml?WT.svl=tn7. Reprinted with permission of SPIE. Many methods have been developed in image processing for face recognition, especially in recent years with the increase of biometric technologies. However, most of these techniques are used on grayscale images acquired in the visible range of the electromagnetic spectrum. The aims of our study are to improve existing tools and to develop new methods for face recognition. The techniques used take advantage of the different spectral ranges, the visible, optical infrared and thermal infrared, by either combining them or analyzing them separately …

Near Infrared[ INFO.INFO-TS ] Computer Science [cs]/Signal and Image ProcessingBiometrics[INFO.INFO-TS] Computer Science [cs]/Signal and Image ProcessingInfraredComputer scienceElectromagnetic spectrumFeature extractionImage processing02 engineering and technologyShort Wave Infrared[ SPI.SIGNAL ] Engineering Sciences [physics]/Signal and Image processingGrayscaleFacial recognition system[INFO.INFO-TS]Computer Science [cs]/Signal and Image Processing0202 electrical engineering electronic engineering information engineeringFeature descriptorComputer visionFace recognition[SPI.SIGNAL] Engineering Sciences [physics]/Signal and Image processingbusiness.industryNear-infrared spectroscopyVisibleFeature extraction020201 artificial intelligence & image processingArtificial intelligencefeature descriptorbusiness[SPI.SIGNAL]Engineering Sciences [physics]/Signal and Image processing:Mathematics and natural science: 400::Information and communication science: 420::Simulation visualization signal processing image processing: 429 [VDP]
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Mir-661: A key Factor in Embryo-Maternal dialog With Potential Clinical Application to Predict Implantation Outcome?

2015

Implantation resulting in a full-term pregnancy is, by large, more than a passive process in which the developed conceptus is passively glued to the uterus through adhesive molecules. It is the result of a perfectly orchestrated dialog between a viable embryo and a receptive endometrium, through a mixture of paracrine and juxtacrine processes in which many key proteins and growth factors play fundamental roles (Pellicer et al., 2002.) Since their discovery, microRNAs have become prominent regulatory candidates, providing missing links for a few biological pathways in this process, although their exact role in human normal embryo formation and endometrial preparation for pregnancy remains un…

NectinsPopulationlcsh:MedicineContext (language use)Fertilization in VitroBiologyBioinformaticsEndometriumHistone DeacetylasesRNA TransportGeneral Biochemistry Genetics and Molecular BiologyCell LineTranscriptomeEndometriumParacrine signallingCell AdhesionmedicineHumansConceptusEmbryo ImplantationEukaryotic Initiation Factorseducationlcsh:R5-920education.field_of_studylcsh:REpithelial CellsEmbryoGeneral MedicineRepressor ProteinsMicroRNAsBlastocystmedicine.anatomical_structureArgonaute Proteinsembryonic structuresImmunologyCommentaryFemaleRNA Interferencelcsh:Medicine (General)Cell Adhesion MoleculesEmbryo qualityEBioMedicine
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Immunomic, genomic and transcriptomic characterization of CT26 colorectal carcinoma

2013

Background Tumor models are critical for our understanding of cancer and the development of cancer therapeutics. Here, we present an integrated map of the genome, transcriptome and immunome of an epithelial mouse tumor, the CT26 colon carcinoma cell line. Results We found that Kras is homozygously mutated at p.G12D, Apc and Tp53 are not mutated, and Cdkn2a is homozygously deleted. Proliferation and stem-cell markers, including Top2a, Birc5 (Survivin), Cldn6 and Mki67, are highly expressed while differentiation and top-crypt markers Muc2, Ms4a8a (MS4A8B) and Epcam are not. Myc, Trp53 (tp53), Mdm2, Hif1a, and Nras are highly expressed while Egfr and Flt1 are not. MHC class I but not MHC class…

Neuroblastoma RAS viral oncogene homologmedicine.disease_causeMajor histocompatibility complexPolymorphism Single NucleotideProto-Oncogene Proteins p21(ras)TranscriptomeMiceAntigenAntigens NeoplasmCDKN2ACell Line TumorMHC class ImedicineGeneticsAnimalsCancer modelsComputational immunologyCyclin-Dependent Kinase Inhibitor p16Mice Inbred BALB CMHC class IIbiologyCarcinomaHigh-Throughput Nucleotide SequencingSequence Analysis DNAColorectal cancerMolecular biologyColonic Neoplasmsbiology.proteinImmunotherapyKRASTranscriptomeResearch ArticleBiotechnologyBMC Genomics
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Early life adversity targets the transcriptional signature of hippocampal NG2+ glia and affects voltage gated sodium (Nav) channels properties

2021

The precise mechanisms underlying the detrimental effects of early life adversity (ELA) on adult mental health remain still elusive. To date, most studies have exclusively targeted neuronal populations and not considered neuron-glia crosstalk as a crucially important element for the integrity of stress-related brain function. Here, we have investigated the impact of ELA, in the form of a limited bedding and nesting material (LBN) paradigm, on a glial subpopulation with unique properties in brain homeostasis, the NG2+ cells. First, we have established a link between maternal behavior, activation of the offspring's stress response and heterogeneity in the outcome to LBN manipulation. We furth…

Neurophysiology and neuropsychologyCandidate geneNav-channelsPhysiologyNa-channelsNeurosciences. Biological psychiatry. NeuropsychiatryHippocampal formationBiologyBiochemistryNG2+ gliaTranscriptome03 medical and health sciencesCellular and Molecular Neuroscience0302 clinical medicineEndocrinologyMediatorDownregulation and upregulationOriginal Research ArticleRC346-429Molecular BiologyVoltage-gated ion channelEndocrine and Autonomic SystemsQP351-495Nav-channels ; Scn7a ; Transcriptome ; Early life stress ; Translational psychiatry ; NG2+ gliaEarly life stress030227 psychiatryScn7aCrosstalk (biology)nervous systemNeurology. Diseases of the nervous systemTranscriptomeNeuroscienceTranslational psychiatry030217 neurology & neurosurgeryHomeostasisRC321-571Neurobiology of Stress
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Age-dependent changes in the transcription profile of long-lived Drosophila over-expressing glutamate cysteine ligase

2011

Abstract In our prior studies ( Orr et al., 2005 ) we achieved a 30–50% increase in the life span of Drosophila by manipulating glutathione (GSH) production in neuronal tissues, through over-expression of glutamate-cysteine ligase (GCL), a key enzyme in glutathione biosynthesis. In the present study, we identified gene response patterns from which plausible mechanisms responsible for the observed effects on life span might be inferred. Functional clustering analysis of the transcriptome data revealed that biological processes affected by GCLc in young flies (10 days) were generally related to cell morphogenesis and differentiation, while those in older flies were associated with nucleosome …

Nucleosome organizationAgingGlutamate-Cysteine LigaseLongevityBiologyTranscriptomechemistry.chemical_compoundTranscription (biology)MorphogenesisAnimalsGeneOligonucleotide Array Sequence AnalysisGeneticschemistry.chemical_classificationDNA ligaseCell morphogenesisGene Expression ProfilingfungiCell DifferentiationGlutathioneGlutathioneImmunity HumoralNucleosomesDrosophila melanogasterGCLCchemistryDevelopmental BiologyMechanisms of Ageing and Development
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Gatekeeper of pluripotency: A common Oct4 transcriptional network operates in mouse eggs and embryonic stem cells

2011

Abstract Background Oct4 is a key factor of an expanded transcriptional network (Oct4-TN) that governs pluripotency and self-renewal in embryonic stem cells (ESCs) and in the inner cell mass from which ESCs are derived. A pending question is whether the establishment of the Oct4-TN initiates during oogenesis or after fertilisation. To this regard, recent evidence has shown that Oct4 controls a poorly known Oct4-TN central to the acquisition of the mouse egg developmental competence. The aim of this study was to investigate the identity and extension of this maternal Oct4-TN, as much as whether its presence is circumscribed to the egg or maintained beyond fertilisation. Results By comparing …

Octamer Transcription Factor-3lcsh:QH426-470lcsh:BiotechnologycellsGene regulatory networkDown-RegulationBiologyTranscriptomeMicelcsh:TP248.13-248.65GeneticsInner cell massAnimalsGene Regulatory NetworksEmbryonic Stem Cellsreproductive and urinary physiologyOligonucleotide Array Sequence AnalysisGeneticsGene Expression ProfilingfungiEmbryoEmbryonic stem cellGene expression profilinglcsh:GeneticsMultigene FamilyCancer cellembryonic structuresOocytesFemalebiological phenomena cell phenomena and immunityFunction and Dysfunction of the Nervous SystemOctamer Transcription Factor-3Research ArticleBiotechnologyBMC Genomics
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Metabolic differences between a wild and a wine strain of Saccharomyces cerevisiae during fermentation unveiled by multi‐omic analysis

2021

Saccharomyces cerevisiae, a widespread yeast present both in the wild and in fermentative processes, like winemaking. During the colonization of these human‐associated fermentative environments, certain strains of S. cerevisiae acquired differential adaptive traits that enhanced their physiological properties to cope with the challenges imposed by these new ecological niches. The advent of omics technologies allowed unveiling some details of the molecular bases responsible for the peculiar traits of S. cerevisiae wine strains. However, the metabolic diversity within yeasts remained poorly explored, in particular that existing between wine and wild strains of S. cerevisiae. For this purpose,…

Omics technologiesSaccharomyces cerevisiaeWineSaccharomyces cerevisiaeMicrobiologyTranscriptome03 medical and health sciencesMetabolomicsYeastsHumansMetabolomicsGeneEcology Evolution Behavior and Systematics030304 developmental biologyWinemakingGeneticsWine0303 health sciencesbiology030306 microbiologyfood and beveragesbiology.organism_classificationMetabolic pathwayPhenotypeMetabolismFermentationFermentationGene expression
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