Search results for "Crystallization"

showing 10 items of 774 documents

Crystallization and preliminary X-ray studies of oligandrin, a sterol-carrier elicitor fromPythium oligandrum

2000

Oligandrin is a 10 kDa acidic protein produced by the fungus micromycete Pythium oligandrum and is a member of the alpha-elicitin group, with sterol- and lipid-carrier properties. Oligandrin has been crystallized at 290 K using PEG 4000 as a precipitant. A cholesterol complex was obtained under the same conditions. The space group of the crystals at low temperature (100 K) is C222, with unit-cell parameters a = 94.0, b = 171.1, c = 55.3 A. Four molecules are present in the asymmetric unit. Data from the free and cholesterol-complexed forms were recorded at synchrotron sources to resolutions of 2.4 (uncomplexed) and 1.9 A (complexed), respectively.

Protein ConformationPythiumElicitinGeneral MedicineBiologyCrystallography X-Raybiology.organism_classificationSterolElicitorlaw.inventionFungal ProteinsSterolsCrystallographyCholesterolSterol carrier proteinStructural BiologylawPEG ratioIntercellular Signaling Peptides and ProteinsMoleculeElectrophoresis Polyacrylamide GelCrystallizationCarrier ProteinsCrystallizationPythium oligandrumActa Crystallographica Section D Biological Crystallography
researchProduct

Nucleation and Growth of CaCO3 Mediated by the Egg-White Protein Ovalbumin: A Time-Resolved in situ Study Using Small-Angle Neutron Scattering

2008

Mineralization of calcium carbonate in aqueous solutions starting from its initiation was studied by time-resolved small-angle neutron scattering (SANS). SANS revealed that homogeneous crystallization of CaCO 3 involves an initial formation of thin plate-shaped nuclei which subsequently reassemble to 3-dimensional particles, first of fractal and finally of compact structure. The presence of the egg-white protein ovalbumin leads to a different progression of mineralization through several stages; the first step represents amorphous CaCO 3, whereas the other phases are crystalline. The formation and dissolution of the amorphous phase is accompanied by Ca (2+)-mediated unfolding and cross-link…

Protein FoldingOvalbuminProtein ConformationChemistryNeutron diffractionNucleationWaterGeneral ChemistryNeutron scatteringBiochemistrySmall-angle neutron scatteringCatalysisCalcium Carbonatelaw.inventionAmorphous solidCalcium ChlorideNeutron DiffractionCrystallographyColloid and Surface ChemistrylawVateriteScattering Small AngleCrystallizationCrystallizationDissolutionJournal of the American Chemical Society
researchProduct

The skeleton of the staghorn coral Acropora millepora: molecular and structural characterization.

2014

15 pages; International audience; The scleractinian coral Acropora millepora is one of the most studied species from the Great Barrier Reef. This species has been used to understand evolutionary, immune and developmental processes in cnidarians. It has also been subject of several ecological studies in order to elucidate reef responses to environmental changes such as temperature rise and ocean acidification (OA). In these contexts, several nucleic acid resources were made available. When combined to a recent proteomic analysis of the coral skeletal organic matrix (SOM), they enabled the identification of several skeletal matrix proteins, making A. millepora into an emerging model for biomi…

ProteomicsBiomineralizationPhysiologyCoralCell Membraneslcsh:MedicineSpectrum Analysis RamanBiochemistryAcropora milleporaMaterials PhysicsSpectroscopy Fourier Transform Infraredcristallcsh:ScienceMicrostructurecorailAcetic AcidAminationExtracellular Matrix ProteinsMineralsMultidisciplinarybiologyEcologyMonosaccharidesMineralogyAnthozoaBiochemistryprotéineCoralsPhysical SciencesCellular Structures and OrganellesCrystallizationcalciteResearch ArticleMaterials ScienceProtein domainmatrice extracellulaireMarine BiologyBone and BonesCalcium CarbonateAnthozoamonosaccharideAnimals14. Life underwater[SDV.IB.BIO]Life Sciences [q-bio]/Bioengineering/BiomaterialsIntegrin bindingStaghorn corallcsh:RBiology and Life SciencesProteinsMembrane ProteinsCell Biology[ SDV.IB.BIO ] Life Sciences [q-bio]/Bioengineering/Biomaterialsbiology.organism_classificationTransmembrane ProteinsSolubilityEarth Scienceslcsh:QPhysiological ProcessesGelsFunction (biology)Biomineralization
researchProduct

2-(1,3-Oxazolin-2-yl)pyridine and 2,6-bis(1,3-oxazolin-2-yl) pyridine

2018

The data presented in this article are related to research articles “Titanium and vanadium catalysts with oxazoline ligands for ethylene-norbornene (co)polymerization (Ochędzan-Siodłak et al., 2018). For the title compounds, 2-(1,3-oxazolin-2-yl)pyridine (Py-ox) and 2,6-bis(1,3-oxazolin-2-yl)pyridine (Py-box), the single-crystal X-ray diffraction measurement together with NMR, GC, MS, DSC analysis, like also the method of crystallization are presented. Keywords: Ligands, Oxazoline, Pyridine, Conformation, Association

Pyridinechemistry.chemical_elementVanadiumOxazolinelcsh:Computer applications to medicine. Medical informatics010402 general chemistryLigands01 natural sciencesMedicinal chemistrylaw.inventionCatalysisAssociationchemistry.chemical_compoundlawPyridineCrystallizationConformationlcsh:Science (General)OxazolineMultidisciplinary010405 organic chemistry0104 chemical sciencesChemistrychemistryPolymerizationlcsh:R858-859.7lcsh:Q1-390TitaniumData in Brief
researchProduct

Inter- and intramolecular motions in proteins

1992

The use of 57 Fe Mossbauer radiation allows the study of protein crystal dynamics by a time-resolved analysis of X-ray scattering. In myoglobin crystals, the main source of the root mean squared amplitude of motions come from intramolecular protein dynamics. Segments of the size of an α-helix move collectively. Long-range correlated motions give only a minor contribution. Comparison with Mossbauer absorption spectroscopy shows that protein-specific dynamics is frozaen out below 200 K and the lattice dynamics in mainly responsible for the low-temperature behavior

Quantitative Biology::BiomoleculesAbsorption spectroscopyScatteringProtein dynamicsCondensed Matter PhysicsAtomic and Molecular Physics and OpticsRoot mean squarechemistry.chemical_compoundAmplitudeNuclear magnetic resonanceMyoglobinchemistryChemical physicsIntramolecular forcePhysical and Theoretical ChemistryProtein crystallizationInternational Journal of Quantum Chemistry
researchProduct

Effect of the phase behaviour of the solvent–antisolvent systems on the gas–antisolvent-crystallisation of paracetamol

2005

Abstract The influence of the phase behaviour of the solvent–antisolvent system on the process conditions for the gas–antisolvent process is investigated. The two fluids are modelled by the Peng–Robinson equation of state while the dissolved solid is described by a Clapeyron-type approach. Based on the correlation of the ternary system, a liquid–liquid immiscibility region has been found which hinders the proper crystallisation of the solute. A thorough investigation of the binary solvent–antisolvent system by the global phase diagram methods yields a criterion for the proper choice of the solvent. The crucial property turns out to be the distance of the solvent–antisolvent system from the …

Quantitative Biology::BiomoleculesEquation of stateTernary numeral systemChemistryGeneral Chemical EngineeringThermodynamicsCondensed Matter PhysicsProcess conditionslaw.inventionCondensed Matter::Soft Condensed MatterSolventlawPhase (matter)Scientific methodPhysics::Chemical PhysicsPhysical and Theoretical ChemistryCrystallizationPhase diagramThe Journal of Supercritical Fluids
researchProduct

Influence of the arrangement of the crystals and the structure of the noncrystalline regions on the mechanical properties of polyethylene terephthala…

2007

Amorphous samples of polyethylene terephthalate were stretched with different rates and stretching ratios at different temperatures. Afterwards they were crystallized. The arrangement of the crystals and the conformations of the chains in the noncrystalline regions were investigated by means of X-ray wide-angle scattering, X-ray small-angle scattering, birefringence measurements and nuclear magnetic resonance measurements. The influence of the morphological structure on the mechanical strength was determined. The stretching ratio itself generally does not characterize the orientation state. The structure obtained after crystallization depends mainly on the birefringence of the sample after …

Quantitative Biology::BiomoleculesMaterials scienceBirefringenceScatteringGeneral EngineeringParacrystallineAmorphous solidlaw.inventionCrystallographychemistry.chemical_compoundchemistrylawLattice (order)Polyethylene terephthalateMoleculeComposite materialCrystallizationJournal of Polymer Science: Polymer Symposia
researchProduct

Coarse Graining of Short Polythylene Chains for Studying Polymer Crystallization.

2015

We derive coarse-grained models of polyethylene in the melt state with the aim to study polymer crystallization. This requires a low level of coarse-graining:  We use a mapping of two CH2 groups onto one bead. The coarse-grained beads are connected with harmonic springs, an optimized angular potential, and an optional torsional potential. Coarse-grained potentials are derived from detailed all-atom simulations, and an optimized form of the force field is then derived which achieves a good accuracy in reproducing the static properties of the chains. We address the question over which temperature range such models can be used, and in particular if the model is capable of reproducing the phase…

Quantitative Biology::BiomoleculesPhase transitionMaterials scienceCrystallization of polymersMelting temperaturePolyethyleneAtmospheric temperature rangeForce field (chemistry)Computer Science ApplicationsCondensed Matter::Soft Condensed Matterchemistry.chemical_compoundchemistryChemical physicsGranularityPhysical and Theoretical ChemistryTorsional potentialJournal of chemical theory and computation
researchProduct

Simulation of Phase Transitions of Single Polymer Chains: Recent Advances

2006

The behaviour of a flexible polymer chain in solvents of variable quality in dilute solution is discussed both in the bulk and in the presence of an adsorbing wall. Monte Carlo simulations of coarse-grained bead-spring models and of the bond fluctuation model are presented and interpreted in terms of phenomenological theories and scaling concepts. Particular attention is paid to the behaviour of the polymer chain when the temperature of the polymer solution gets lower than the Theta temperature. It is argued that the adsorption transition line at the Theta temperature splits into lines of wetting and drying transitions of polymer globules attached to the wall. In addition, it is shown that …

Quantitative Biology::BiomoleculesPhase transitionPolymers and PlasticsChemistryCrystallization of polymersOrganic ChemistryThermodynamicsCoil-globule transitionCondensed Matter PhysicsRandom coilCondensed Matter::Soft Condensed MatterMean field theoryThermodynamic limitMaterials ChemistryVirial expansionScalingMacromolecular Symposia
researchProduct

The phase diagram of a single polymer chain: New insights from a new simulation method

2006

We present simulation results for the phase behavior of a single chain for a flexible lattice polymer model using the Wang-Landau sampling idea. Applying this new algorithm to the problem of the homopolymer collapse allows us to investigate not only the high temperature coil–globule transition but also an ensuing crystallization at lower temperature. Performing a finite size scaling analysis on the two transitions, we show that they coincide for our model in the thermodynamic limit corresponding to a direct collapse of the random coil into the crystal without intermediate coil–globule transition. As a consequence, also the many chain phase diagram of this model can be predicted to consist o…

Quantitative Biology::BiomoleculesPolymers and PlasticsChemistryMonte Carlo methodThermodynamicsCondensed Matter PhysicsRandom coillaw.inventionlawLattice (order)Thermodynamic limitMaterials ChemistryDensity of statesStatistical physicsPhysical and Theoretical ChemistryCrystallizationScalingPhase diagramJournal of Polymer Science Part B: Polymer Physics
researchProduct