Search results for "Dicarboxylic Acid"

showing 10 items of 75 documents

The cytoplasmic PASC domain of the sensor kinase DcuS of Escherichia coli : role in signal transduction, dimer formation, and DctA interaction

2013

The cytoplasmic PAS(C) domain of the fumarate responsive sensor kinase DcuS of Escherichia coli links the transmembrane to the kinase domain. PAS(C) is also required for interaction with the transporter DctA serving as a cosensor of DcuS. Earlier studies suggested that PAS(C) functions as a hinge and transmits the signal to the kinase. Reorganizing the PAS(C) dimer interaction and, independently, removal of DctA, converts DcuS to the constitutive ON state (active without fumarate stimulation). ON mutants were categorized with respect to these two biophysical interactions and the functional state of DcuS: type I-ON mutations grossly reorganize the homodimer, and decrease interaction with Dct…

PAS domainDicarboxylic Acid TransportersModels MolecularfumarateProtein ConformationEscherichia coli ProteinsDNA Mutational AnalysisDctAModels Biological570 Life sciencessignal transduction.Escherichia coliProtein Interaction Domains and MotifsProtein MultimerizationDcuS sensor kinaseProtein KinasesOriginal ResearchSignal Transduction570 Biowissenschaften
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Crystallisation of H3BTC, H3TPO or H2SDA with MII (M = Co, Mn or Zn) and 2,2′-bipyridyl: design and control of co-ordination architecture, and magnet…

1999

The hydrothermal reaction of benzene-1,3,5-tricarboxylic acid (H3BTC) with MII (M = Mn, Co or Zn), tris(4-carboxyphenyl)phosphine oxide (H3TPO) or cis-stilbene-4,4′-dicarboxylic acid (H2SDA) with CoII and 2,2′-bipyridyl (BIPY) gave 1-D co-ordination networks formulated as: [M(HBTC)(BIPY)(H2O)] (M = Mn 1, Co 2, or Zn 3; [Co3(BTC)2(BIPY)2(H2O)6]·4H2O 4, [Co3(TPO)2(BIPY)2(H2O)6]·xH2O 5 and [Co(SDA)(BIPY)(H2O)] 6. Structures 1 and 2 consist of double stranded chains of alternating HBTC dianions and dimeric units MII–MII linked by two µ-(1,1) bridging carboxylates. Magnetic properties of 1 and 2 indicate the presence of ferromagnetic exchange interactions within the dimers. Structures 4 and 5 co…

Phosphine oxidechemistry.chemical_classificationChemistryInorganic chemistryInfrared spectroscopychemistry.chemical_elementGeneral ChemistryCrystal structureTricarboxylic acidchemistry.chemical_compoundDicarboxylic acidPolymer chemistryHydrothermal synthesisMetal-organic frameworkCobaltJournal of the Chemical Society, Dalton Transactions
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Functioning of DcuC as the C 4 -Dicarboxylate Carrier during Glucose Fermentation by Escherichia coli

1999

ABSTRACT The dcuC gene of Escherichia coli encodes an alternative C 4 -dicarboxylate carrier (DcuC) with low transport activity. The expression of dcuC was investigated. dcuC was expressed only under anaerobic conditions; nitrate and fumarate caused slight repression and stimulation of expression, respectively. Anaerobic induction depended mainly on the transcriptional regulator FNR. Fumarate stimulation was independent of the fumarate response regulator DcuR. The expression of dcuC was not significantly inhibited by glucose, assigning a role to DcuC during glucose fermentation. The inactivation of dcuC increased fumarate-succinate exchange and fumarate uptake by DcuA and DcuB, suggesting a…

Physiology and MetabolismMolecular Sequence DataMutantStimulationBiologymedicine.disease_causeMicrobiologyBacterial ProteinsFumaratesConsensus SequenceEscherichia colimedicineTranscriptional regulationDicarboxylic AcidsAnaerobiosisPromoter Regions GeneticMolecular BiologyEscherichia coliPsychological repressionDicarboxylic Acid TransportersBinding SitesBase SequenceEscherichia coli ProteinsSuccinatesGene Expression Regulation BacterialKineticsResponse regulatorGlucoseBiochemistryFermentationFermentationEffluxCarrier ProteinsRibosomesJournal of Bacteriology
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Fumarate dependent protein composition under aerobic and anaerobic growth conditions in Escherichia coli

2020

Abstract In the absence of sugars, C4-dicarboxylates (C4DC) like fumarate represent important substrates for growth of Escherichia coli. Aerobically, C4DCs are oxidized to CO2 whereas anaerobically, C4DCs are used for fumarate respiration. In order to determine the impact of fumarate under aerobic and anaerobic conditions, proteomes of E. coli W3110 grown aerobically or anaerobically with fumarate and/or the non-C4DC substrate glycerol were comparatively profiled by nanoLC-MS/MS. Membrane enrichment allowed sensitive detection of membrane proteins. A total of 1657 proteins of which 646 and 374 were assigned to the cytosol or membrane, respectively, were covered. Presence of fumarate trigger…

Proteomics0301 basic medicineBiophysicsCatabolite repressionmedicine.disease_causeBiochemistryCarbon utilization03 medical and health sciencesFumaratesTandem Mass SpectrometryEscherichia colimedicineDicarboxylic AcidsAnaerobiosisEscherichia coli030102 biochemistry & molecular biologybiologyChemistryEscherichia coli ProteinsGene Expression Regulation BacterialAerobiosisDNA-Binding ProteinsCitric acid cycle030104 developmental biologyRegulonMembrane proteinBiochemistrycAMP receptor proteinbiology.proteinProtein KinasesAnaerobic exerciseTranscription FactorsJournal of Proteomics
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Escherichia coli possesses two homologous anaerobic C4-dicarboxylate membrane transporters (DcuA and DcuB) distinct from the aerobic dicarboxylate tr…

1994

The nucleotide sequences of two Escherichia coli genes, dcuA and dcuB (formerly designated genA and genF), have been shown to encode highly homologous products, M(r) 45,751 and 47,935 (434 and 446 amino acid residues) with 36% sequence identity (63% similarity). These proteins have a high proportion (approximately 61%) of hydrophobic residues and are probably members of a new group of integral inner membrane proteins. The locations of the dcu genes, one upstream of the aspartase gene (dcuA-aspA) and the other downstream of the anaerobic fumarase gene (fumB-dcuB), suggested that they may function in the anaerobic transport of C4-dicarboxylic acids. Growth tests and transport studies with mut…

Sequence analysisMolecular Sequence DataMutantSuccinic AcidBiologymedicine.disease_causeMicrobiologyProtein Structure SecondarySubstrate SpecificityProtein structureBacterial ProteinsFumaratesEscherichia colimedicineAmino Acid SequenceAnaerobiosisMolecular BiologyGeneEscherichia coliPeptide sequenceDicarboxylic Acid Transporterschemistry.chemical_classificationAspartic AcidBase SequenceSequence Homology Amino AcidEscherichia coli ProteinsMembrane ProteinsBiological TransportSuccinatesSequence Analysis DNAAerobiosisAmino acidRepressor ProteinschemistryBiochemistryMembrane proteinGenes BacterialCarrier ProteinsResearch ArticleTranscription FactorsJournal of Bacteriology
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CCDC 796685: Experimental Crystal Structure Determination

2011

Related Article: M.Tuikka, M.Niskanen, P.Hirva, K.Rissanen, A.Valkonen, M.Haukka|2011|Chem.Commun.|47|3427|doi:10.1039/c0cc05726f

Space GroupCrystallography(22'-Bipyridine-44'-dicarboxylic acid-NN')-dicarbonyl-bis(iodo)-ruthenium bis(diiodine) methanol solvateCrystal SystemCrystal StructureCell ParametersExperimental 3D Coordinates
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CCDC 901797: Experimental Crystal Structure Determination

2014

Related Article: Inguna Goba, Baiba Turovska, Sergey Belyakov, Edvards Liepinsh|2014|J.Mol.Struct.|1074|549|doi:10.1016/j.molstruc.2014.06.044

Space GroupCrystallographyCrystal System5-cyano-26-dimethyl-14-dihydropyridine-34-dicarboxylic acid dimethyl esterCrystal StructureCell ParametersExperimental 3D Coordinates
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CCDC 241331: Experimental Crystal Structure Determination

2005

Related Article: M.Brunner, M.Nissinen, T.Straub, K.Rissanen, A.M.P.Koskinen|2005|J.Mol.Struct.|734|177|doi:10.1016/j.molstruc.2004.09.020

Space GroupCrystallographyCrystal SystemCrystal Structure2-t-butyl-4-(methoxycarbonylmethyl)oxazolidine-34-dicarboxylic acid 3-t-butyl ester 4-methyl esterCell ParametersExperimental 3D Coordinates
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CCDC 901799: Experimental Crystal Structure Determination

2014

Related Article: Inguna Goba, Baiba Turovska, Sergey Belyakov, Edvards Liepinsh|2014|J.Mol.Struct.|1074|549|doi:10.1016/j.molstruc.2014.06.044

Space GroupCrystallographyCrystal SystemCrystal StructureCell Parameters5-cyano-126-trimethyl-14-dihydropyridine-34-dicarboxylic acid dimethylesterExperimental 3D Coordinates
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CCDC 901796: Experimental Crystal Structure Determination

2014

Related Article: Inguna Goba, Baiba Turovska, Sergey Belyakov, Edvards Liepinsh|2014|J.Mol.Struct.|1074|549|doi:10.1016/j.molstruc.2014.06.044

Space GroupCrystallographyCrystal SystemCrystal StructureCell Parameters5-cyano-26-dimethyl-14-dihydropyridine-34-dicarboxylic acid 3-methylester monohydrateExperimental 3D Coordinates
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