Search results for "Directed graph"

showing 10 items of 43 documents

Robust Conditional Independence maps of single-voxel Magnetic Resonance Spectra to elucidate associations between brain tumours and metabolites.

2020

The aim of the paper is two-fold. First, we show that structure finding with the PC algorithm can be inherently unstable and requires further operational constraints in order to consistently obtain models that are faithful to the data. We propose a methodology to stabilise the structure finding process, minimising both false positive and false negative error rates. This is demonstrated with synthetic data. Second, to apply the proposed structure finding methodology to a data set comprising single-voxel Magnetic Resonance Spectra of normal brain and three classes of brain tumours, to elucidate the associations between brain tumour types and a range of observed metabolites that are known to b…

False discovery rateB VitaminsMagnetic Resonance SpectroscopyComputer scienceDirected Acyclic GraphsBiochemistry030218 nuclear medicine & medical imaging0302 clinical medicineMetabolitesMedicine and Health SciencesAmino AcidsQANeurological Tumors0303 health sciencesMultidisciplinaryDirected GraphsOrganic CompoundsBrain NeoplasmsQRTotal Cell CountingBrainMutual informationVitaminsLipidsChemistryConditional independenceOncologyNeurologyPhysical SciencesEngineering and TechnologyMedicineMeningiomaAlgorithmManagement EngineeringAlgorithmsResearch ArticleComputer and Information SciencesScienceCell Enumeration TechniquesGlycineFeature selectionCholinesResearch and Analysis MethodsSynthetic data03 medical and health sciencesInsuranceRobustness (computer science)HumansMetabolomics030304 developmental biologyRisk ManagementOrganic ChemistryChemical CompoundsBayesian networkBiology and Life SciencesCancers and NeoplasmsProteinsBayes TheoremDirected acyclic graphR1MetabolismAliphatic Amino AcidsGraph TheoryMathematicsPLoS ONE
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Bounding the number of vertices in the degree graph of a finite group

2020

Abstract Let G be a finite group, and let cd ( G ) denote the set of degrees of the irreducible complex characters of G . The degree graph Δ ( G ) of G is defined as the simple undirected graph whose vertex set V ( G ) consists of the prime divisors of the numbers in cd ( G ) , two distinct vertices p and q being adjacent if and only if pq divides some number in cd ( G ) . In this note, we provide an upper bound on the size of V ( G ) in terms of the clique number ω ( G ) (i.e., the maximum size of a subset of V ( G ) inducing a complete subgraph) of Δ ( G ) . Namely, we show that | V ( G ) | ≤ max { 2 ω ( G ) + 1 , 3 ω ( G ) − 4 } . Examples are given in order to show that the bound is bes…

Finite groupAlgebra and Number Theory20C15010102 general mathematicsGroup Theory (math.GR)01 natural sciencesUpper and lower boundsGraphVertex (geometry)CombinatoricsBounding overwatch0103 physical sciencesFOS: MathematicsMaximum size010307 mathematical physics0101 mathematicsUndirected graphMathematics - Group TheoryClique numberMathematicsJournal of Pure and Applied Algebra
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Curved Edge Routing

2001

We consider the problem of drawing a graph where edges are represented by smooth curves between the associated nodes. Previously curved edges were drawn as splines defined by carefully calculated control points. We present a completely different approach where finding an edge is reduced to solving a differential equation. This approach allows to represent the graph drawing aesthetics directly, even the most complex ones denoting the dependencies among the paths.

Graph drawingComputer scienceDifferential equationControl pointMultigraphMultiple edgesForce-directed graph drawingTopological graphCurvatureTopologyGraphMathematicsofComputing_DISCRETEMATHEMATICS
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A tabu search algorithm for the bipartite drawing problem

1998

Graphs are used to represent reality in several areas of knowledge. This has generated considerable interest in graph drawing algorithms. Arc crossing minimization is a fundamental aesthetic criterion to obtain a readable map of a graph. The problem of minimizing the number of arc crossings in a bipartite graph (BDP) is NP-complete. In this paper we present a Tabu Search (TS) scheme for the BDP. Several algorithms can be obtained with this scheme by implementing different evaluators in the move definitions. In this paper we propose two variants. Computational results are reported on a set of 300 randomly generated test problems. The two algorithms have been compared with the best heuristics…

Information Systems and ManagementGeneral Computer ScienceManagement Science and Operations ResearchIndustrial and Manufacturing EngineeringGraphTabu searchGraph drawingModeling and SimulationBipartite graphMinificationForce-directed graph drawingHeuristicsAlgorithmMathematicsEuropean Journal of Operational Research
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The Use of the Recommended Learning Path in the Personalized Adaptive E-Learning System

2020

This paper promotes the idea of the learning process management in the e-learning system. A personalized adaptive e-learning system is used in this research that comprises three developed topic acquisition sequences: teacher, learner or optimal topic sequences. The learner has the ability to switch between the aforementioned topic sequences. The system stores data about the course acquisition process. The analysis of the stored data demonstrated that a bit more than half of the students used the teacher topic sequence; higher grades in topics got those students who chose the learner or optimal topic sequence; the grades of the half of the students who used the optimal and teacher topic sequ…

Information retrievalComputer scienceComputingMilieux_COMPUTERSANDEDUCATIONGraph (abstract data type)Directed graph
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The stacker crane problem and the directed general routing problem

2015

[EN] This article deals with the polyhedral description and the resolution of the directed general routing problem (DGRP) and the stacker crane problem (SCP). The DGRP contains a large number of important arc and node routing problems as special cases, including the SCP. Large families of facet-defining inequalities for the DGRP are described and a branch-and-cut algorithm for these problems is presented. Extensive computational experiments over different sets of DGRP and SCP instances are included.

Mathematical optimizationDirected general routing problemStacker crane problemComputer Networks and CommunicationsStackerNode (networking)Branch-and-cut algorithmDirected graphResolution (logic)Directed rural postman problemHardware and ArchitectureRouting (electronic design automation)MATEMATICA APLICADASoftwareInformation SystemsMathematics
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A tabu thresholding algorithm for arc crossing minimization in bipartite graphs

1996

Acyclic directed graphs are commonly used to model complex systems. The most important criterion to obtain a readable map of an acyclic graph is that of minimizing the number of arc crossings. In this paper, we present a heuristic for solving the problem of minimizing the number of arc crossings in a bipartite graph. It consists of a novel and easier implementation of fundamental tabu search ideas without explicit use of memory structures (a tabu thresholding approach). Computational results are reported on a set of 250 randomly generated test problems. Our algorithm has been compared with the two best heuristics published in the literature and with the optimal solutions for the test proble…

Mathematical optimizationGeneral Decision SciencesComparability graphDirected graphManagement Science and Operations ResearchDirected acyclic graphFeedback arc setTabu searchlaw.inventionlawLine graphBipartite graphMathematicsofComputing_DISCRETEMATHEMATICSMoral graphMathematicsAnnals of Operations Research
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An Aggressive Search Procedure for the Bipartite Drawing Problem

1996

Graphs are used to represent reality in several areas of knowledge. This has generated considerable interest in graph drawing algorithms. Arc crossing minimization is a fundamental aesthetic criterion to obtain a readable map of a graph. The problem of minimizing the number of arc crossings in a bipartite graph (BDP) is NP-complete. In this paper we present an aggressive search scheme for the BDP based on the Intensification, Diversification and Strategic Oscillation elements of Tabu Search. Several algorithms can be obtained with this scheme by implementing different evaluators in the move definitions. In this paper we propose two variants. Computational results are reported on a set of 30…

Mathematical optimizationGraph drawingBipartite graphSearch procedureForce-directed graph drawingMinificationHeuristicsGraphTabu searchMathematics
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A note on the separation of subtour elimination constraints in elementary shortest path problems

2013

Abstract This note proposes an alternative procedure for identifying violated subtour elimination constraints (SECs) in branch-and-cut algorithms for elementary shortest path problems. The procedure is also applicable to other routing problems, such as variants of travelling salesman or shortest Hamiltonian path problems, on directed graphs. The proposed procedure is based on computing the strong components of the support graph. The procedure possesses a better worst-case time complexity than the standard way of separating SECs, which uses maximum flow algorithms, and is easier to implement.

Mathematical optimizationInformation Systems and ManagementGeneral Computer ScienceDirected graphManagement Science and Operations ResearchHamiltonian pathTravelling salesman problemIndustrial and Manufacturing Engineeringsymbols.namesakeModeling and SimulationShortest path problemsymbolsGraph (abstract data type)Branch and cutTime complexityInteger programmingMathematicsofComputing_DISCRETEMATHEMATICSMathematicsEuropean Journal of Operational Research
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Incremental bipartite drawing problem

2001

Abstract Layout strategies that strive to preserve perspective from earlier drawings are called incremental. In this paper we study the incremental arc crossing minimization problem for bipartite graphs. We develop a greedy randomized adaptive search procedure (GRASP) for this problem. We have also developed a branch-and-bound algorithm in order to compute the relative gap to the optimal solution of the GRASP approach. Computational experiments are performed with 450 graph instances to first study the effect of changes in grasp search parameters and then to test the efficiency of the proposed procedure. Scope and purpose Many information systems require graphs to be drawn so that these syst…

Mathematical optimizationTheoretical computer scienceGeneral Computer ScienceManagement Science and Operations ResearchModular decompositionGraph drawingModeling and SimulationIndependent setClique-widthBipartite graphForce-directed graph drawingGraph productGreedy randomized adaptive search procedureMathematicsofComputing_DISCRETEMATHEMATICSMathematicsComputers & Operations Research
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