Search results for "Dop"

showing 10 items of 4870 documents

In vivoanalysis of the lumenal binding protein (BiP) reveals multiple functions of its ATPase domain

2007

International audience; The endoplasmic reticulum (ER) chaperone binding protein (BiP) binds exposed hydrophobic regions of misfolded proteins. Cycles of ATP hydrolysis and nucleotide exchange on the ATPase domain were shown to regulate the function of the ligand-binding domain in vitro. Here we show that ATPase mutants of BiP with defective ATP-hydrolysis (T46G) or ATP-binding (G235D) caused permanent association with a model ligand, but also interfered with the production of secretory, but not cytosolic, proteins in vivo. Furthermore, the negative effect of BiP(T46G) on secretory protein synthesis was rescued by increased levels of wild-type BiP, whereas the G235D mutation was dominant. U…

0106 biological sciencesgenetic structuresRecombinant Fusion ProteinsATPaseBlotting WesternGreen Fluorescent ProteinsPlant ScienceBINDING PROTEINEndoplasmic ReticulumModels Biological01 natural sciencesChromatography Affinity[SDV.GEN.GPL]Life Sciences [q-bio]/Genetics/Plants genetics03 medical and health sciencesAdenosine TriphosphateTobaccoPROTEIN FOLDINGGeneticsImmunoprecipitationEndoplasmic Reticulum Chaperone BiPHSP70Heat-Shock Proteins030304 developmental biologyCHAPERONEAdenosine Triphosphatases0303 health sciencesbiologyHydrolysisProtoplastsEndoplasmic reticulumBinding proteinCell BiologyPlants Genetically ModifiedLigand (biochemistry)Secretory proteinBiochemistryChaperone (protein)MutationChaperone bindingbiology.proteinATPASEElectrophoresis Polyacrylamide GelProtein foldingMolecular ChaperonesProtein BindingSignal Transduction010606 plant biology & botanyThe Plant Journal
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A haplotype-resolved, de novo genome assembly for the wood tiger moth (Arctia plantaginis) through trio binning

2020

ABSTRACT Background Diploid genome assembly is typically impeded by heterozygosity because it introduces errors when haplotypes are collapsed into a consensus sequence. Trio binning offers an innovative solution that exploits heterozygosity for assembly. Short, parental reads are used to assign parental origin to long reads from their F1 offspring before assembly, enabling complete haplotype resolution. Trio binning could therefore provide an effective strategy for assembling highly heterozygous genomes, which are traditionally problematic, such as insect genomes. This includes the wood tiger moth (Arctia plantaginis), which is an evolutionary study system for warning colour polymorphism. F…

0106 biological scienceshaplotypepopulation genomicsAcademicSubjects/SCI02254PopulationSequence assemblyHealth Informaticswood tiger moth; Arctia plantaginisMothsBiologyData Notegenotyyppi010603 evolutionary biology01 natural sciencesGenometäpläsiilikäsPopulation genomicsLoss of heterozygosity03 medical and health sciencesConsensus sequenceAnimalsHumanseducation030304 developmental biology0303 health scienceseducation.field_of_studyGenetic diversityGenometrio binningHaplotypewood tiger mothKaryotypegenomiikkaGenomicsWoodComputer Science ApplicationsLepidopteraHaplotypesannotationpopulaatiogenetiikkaEvolutionary biologyperimägenome assemblyAcademicSubjects/SCI00960Corrigendum
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Anhydrobiosis: Inside yeast cells

2018

International audience; Under natural conditions yeast cells as well as other microorganisms are regularly subjected to the influence of severe drought, which leads to their serious dehydration. The dry seasons are then changed by rains and there is a restoration of normal water potential inside the cells. To survive such seasonal changes a lot of vegetative microbial cells, which belong to various genera and species, may be able to enter into a state of anhydrobiosis, in which their metabolism is temporarily and reversibly suspended or delayed. This evolutionarily developed adaptation to extreme conditions of the environment is widely used for practical goals - for conservation of microorg…

0106 biological scienceslipid-phaseCell Survivaldesiccation toleranceMicroorganismBiophysicsBioengineeringSaccharomyces cerevisiaeBiology01 natural sciencesApplied Microbiology and BiotechnologyDehydration-rehydrationDesiccation tolerance03 medical and health scienceswine yeastIntracellular protective reactions010608 biotechnology[SDV.IDA]Life Sciences [q-bio]/Food engineeringOrganelle[SPI.GPROC]Engineering Sciences [physics]/Chemical and Process Engineeringwater replacement hypothesisLaboratorium voor PlantenfysiologieDesiccationCryptobiosismembrane phase-transitions030304 developmental biology0303 health sciencesDehydrationWaterendoplasmic-reticulumplasma-membraneAnhydrobiosisYeastYeastDehydration–rehydrationYeast in winemaking[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologyBiofysicaCellular MicroenvironmentIntracellular changesBiochemistryglass-transitioncandida-utilis cellsEPSAdaptationDesiccationsaccharomyces-cerevisiae cellsLaboratory of Plant PhysiologyBiotechnologyBiotechnology Advances
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Nitric oxide and glutathione impact the expression of iron uptake- and iron transport-related genes as well as the content of metals in A. thaliana p…

2012

International audience; Mounting evidence indicate that nitric oxide (NO) acts as a signaling molecule mediating iron deficiency responses through the upregulation of the expression of iron uptake-related genes. Accordingly, NO donors such as nitrosoglutathione (GSNO) were reported to improve the fitness of plants grown under iron deficiency. Here, we showed that glutathione, a by-product of GSNO, triggered the upregulation of the expression of iron uptake- and transport-related gene and an increase of iron concentration in Arabidopsis thaliana seedlings facing iron deficiency. Furthermore, we provided evidence that under iron deficiency, NO released by GSNO did not improve the root iron co…

0106 biological sciencesmineral contentShort CommunicationIron[SDV]Life Sciences [q-bio]ArabidopsisPlant ScienceGenes PlantNitric Oxide01 natural sciencesPlant RootsNitric oxideS-Nitrosoglutathione03 medical and health scienceschemistry.chemical_compoundDownregulation and upregulationGene Expression Regulation PlantArabidopsismineral deficienciesmedicineArabidopsis thalianaglutathione030304 developmental biologymineral uptakeRegulation of gene expression0303 health sciencesManganesebiologyArabidopsis Proteinsarabidopsis thalianaBiological TransportIron deficiencyGlutathioneIron Deficienciesbiology.organism_classificationmedicine.diseaseZincchemistryBiochemistryS-Nitrosoglutathione[SDE]Environmental Sciencesgene expressionCopper010606 plant biology & botany
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How to escape from insect egg parasitoids : a review of potential factors explaining parasitoid absence across the Insecta

2020

The egg is the first life stage directly exposed to the environment in oviparous animals, including many vertebrates and most arthropods. Eggs are vulnerable and prone to mortality risks. In arthropods, one of the most common egg mortality factors is attack from parasitoids. Yet, parasitoids that attack the egg stage are absent in more than half of all insect (sub)orders. In this review, we explore possible causes explaining why eggs of some insect taxa are not parasitized. Many insect (sub)orders that are not attacked by egg parasitoids lack herbivorous species, with some notable exceptions. Factors we consider to have led to escape from egg parasitism are parental egg care, rapid egg deve…

0106 biological sciencesoviposition siteInsectamedia_common.quotation_subjectZoologyParasitismparental careInsectHymenoptera010603 evolutionary biology01 natural sciencesGeneral Biochemistry Genetics and Molecular BiologyParasitoidHost-Parasite InteractionsLepidoptera genitalia03 medical and health sciencesAnimalsLaboratory of EntomologyReview Articles030304 developmental biologyGeneral Environmental Sciencemedia_commonOvum0303 health sciencesGeneral Immunology and MicrobiologybiologyherbivoryfungiGeneral Medicinebiology.organism_classificationPE&RCLaboratorium voor EntomologieEusocialityBiosystematiekegg protectionegg depositionLarvaembryonic structuresBiosystematicshymenopteraEPSGeneral Agricultural and Biological SciencesOviparityPaternal careProceedings. Biological sciences
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Plasma membrane protein trafficking in plant-microbe interactions: a plant cell point of view

2014

International audience; In order to ensure their physiological and cellular functions, plasma membrane (PM) proteins must be properly conveyed from their site of synthesis, i.e., the endoplasmic reticulum, to their final destination, the PM, through the secretory pathway. PM protein homeostasis also relies on recycling and/or degradation, two processes that are initiated by endocytosis. Vesicular membrane trafficking events to and from the PM have been shown to be altered when plant cells are exposed to mutualistic or pathogenic microbes. In this review, we will describe the fine-tune regulation of such alterations, and their consequence in PM protein activity. We will consider the formatio…

0106 biological sciencesplant–microbe interactions[SDV]Life Sciences [q-bio]signaling proteinsplasma membrane;vesicular trafficking;plant-microbe interactions;signaling proteins;sugar transportersReview Articlerécepteur cytoplasmique et nucléairePlant ScienceBiologymembrane plasmiqueSugar transporterslcsh:Plant cultureEndocytosisBioinformaticsplasma membrane01 natural sciencesPlant-Microbe Interactionsvoie secretoire03 medical and health sciences[SDV.BV]Life Sciences [q-bio]/Vegetal Biologylcsh:SB1-1110ReceptorSecretory pathway030304 developmental biologychemistry.chemical_classification0303 health sciencesReactive oxygen speciesphysiologie cellulaire végétaletransport de protéineEndoplasmic reticulumPlant cellTransport proteinCell biologyinteraction protéine membranechemistry[SDE]Environmental Sciencesvesicular traffickingIntracellular010606 plant biology & botanyFrontiers in Plant Science
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Responses of above- and below-ground fungal symbionts to cessation of mowing in subalpine grassland

2017

Abstract The cessation of mowing in subalpine grasslands promotes the dominance of Festuca paniculata leading to the reduction in plant diversity. Moreover, it affects positively the abundance of Epichloe sp. inhabiting F. paniculata leaves and negatively the soil density of arbuscular mycorrhizal fungi (AMF). We explored how the cessation of mowing influences root AMF communities in F. paniculata and the neighboring plants, and Epichloe sp alkaloids. Thirteen AMF operational taxonomical units were found. The neighboring plants affected positively the abundances of Aalpin and GLOM_7 whereas the interaction plant/management type influenced significantly Claroide_1 , GLOM_1 and GLOM_7 . The N…

0106 biological sciencesprairie alpine[SDV]Life Sciences [q-bio]alpine grasslandsPlant ScienceBiologychampignon mycorhizien010603 evolutionary biology01 natural sciencesEndophyteGrasslandEpichloe sp.BotanyFestuca paniculataDominance (ecology)symbioteEcology Evolution Behavior and SystematicsArbuscular mycorrhizal fungal communityPlant diversity2. Zero hungergeographygeography.geographical_feature_categoryEcology[ SDV ] Life Sciences [q-bio]Ecological ModelingEndophyte fungi15. Life on landbiology.organism_classificationBulk densityGrassland dynamicssymbiontMontane ecologychampignon endophyte010606 plant biology & botany
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Nitric oxide contributes to cadmium toxicity in Arabidopsis by promoting cadmium accumulation in roots and by up-regulating genes related to iron upt…

2009

Abstract Nitric oxide (NO) functions as a cell-signaling molecule in plants. In particular, a role for NO in the regulation of iron homeostasis and in the plant response to toxic metals has been proposed. Here, we investigated the synthesis and the role of NO in plants exposed to cadmium (Cd2+), a nonessential and toxic metal. We demonstrate that Cd2+ induces NO synthesis in roots and leaves of Arabidopsis (Arabidopsis thaliana) seedlings. This production, which is sensitive to NO synthase inhibitors, does not involve nitrate reductase and AtNOA1 but requires IRT1, encoding a major plasma membrane transporter for iron but also Cd2+. By analyzing the incidence of NO scavenging or inhibition …

0106 biological sciencesroots[ SDV.BV ] Life Sciences [q-bio]/Vegetal BiologyPhysiologytoxic metalscadmiumNitrogen assimilationArabidopsischemistry.chemical_elementPlant ScienceNitrate reductase01 natural sciencesNitric oxide03 medical and health scienceschemistry.chemical_compoundArabidopsisGeneticsArabidopsis thaliana[SDV.BV]Life Sciences [q-bio]/Vegetal Biology030304 developmental biologyplasma membrane transporter2. Zero hunger0303 health sciencesCadmiumbiologyAtNOA1ACLNitric oxideMetabolismbiology.organism_classificationNitric oxide synthasechemistryBiochemistrybiology.proteiniron homeostasis010606 plant biology & botany
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Selective photocatalytic oxidation of aromatic alcohols in water by using P-doped g-C3N4

2018

A set of bare and P-doped graphitic carbon nitride (g-C3N4) photocatalysts has been prepared by thermal condensation of melamine, urea or thiourea. For the sake of comparison, a g-C3N4 sample obtained in the presence of cyanuric acid and thermally exfoliated C3N4 powders were also studied. The materials were physicochemically characterized and their photocatalytic activity was studied for the selective oxidation of benzyl alcohol (BA), 4-methoxy benzyl alcohol (4-MBA) and piperonyl alcohol (PA) in water suspension both under UV and visible light irradiation. The influence of the type and position of the substituents on conversion and selectivity to aldehyde was remarkable. The presence of P…

02 engineering and technology010402 general chemistryPhotochemistryAromatic alcohols01 natural sciencesAldehydeCatalysisCatalysichemistry.chemical_compoundPhotocatalysiAromatic alcoholPhotocatalysisG-C3N4General Environmental ScienceDoped carbon nitridechemistry.chemical_classification2300ChemistryProcess Chemistry and TechnologyGraphitic carbon nitride021001 nanoscience & nanotechnology0104 chemical sciencesThioureaBenzyl alcoholPhotocatalysisSelective oxidationSettore CHIM/07 - Fondamenti Chimici Delle Tecnologie0210 nano-technologyMelamineCyanuric acidSelectivityNuclear chemistryApplied Catalysis B: Environmental
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The adoption of green energy technologies: The role of policies in Austria, Germany, and Switzerland

2017

We contribute to the existing research about policy-induced technology adoption in several ways. First, we suggest a new survey design to measure the energy-related policy environment. Second, we simultaneously estimate the policy effects for the adoption propensity and the adoption intensity simultaneously and, third, we compare the policy effects in the three countries, Austria, Germany, and Switzerland. Based on a representative sample of firms for all three countries we find that policies essentially promote the adoption of technologies and they are practically ineffective for the intensity, which poses a great challenge to future policy designs. Voluntary agreements or demand-related f…

020209 energy02 engineering and technology7. Clean energyEnergy policyArticlecountry comparison0502 economics and business0202 electrical engineering electronic engineering information engineeringenergy technologyenergy innovations050207 economicsta512energiaPublic economicsRenewable Energy Sustainability and the Environmentbusiness.industryfirm-level adoption05 social sciencesEnvironmental resource managementSurvey researchSubsidyOriginal ArticlesRenewable energyinnovaatiotenergiapolitiikka13. Climate actionenergiateknologiaEnergy policy; Energy technology; Firm-level adoption; Energy innovations; Country comparisonbusinessEnergy policyInternational Journal of Green Energy
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