Search results for "EB"

showing 10 items of 15658 documents

Sustained oscillations in the MAP kinase cascade.

2016

Abstract The MAP kinase cascade is a network of enzymatic reactions arranged in layers. In each layer occurs a multiple futile cycle of phosphorylations. The fully phosphorylated substrate then serves as an enzyme for the layer below. This paper focuses on the existence of parameters for which Hopf bifurcations occur and generate periodic orbits. Furthermore it is explained how geometric singular perturbation theory allows to generalize results from simple models to more complex ones.

0301 basic medicineStatistics and ProbabilitySingular perturbationDynamical systems theoryMolecular Networks (q-bio.MN)Dynamical Systems (math.DS)MAP kinase cascadeGeneral Biochemistry Genetics and Molecular BiologyQuantitative Biology::Subcellular Processes03 medical and health sciencessymbols.namesakeSimple (abstract algebra)Classical Analysis and ODEs (math.CA)FOS: MathematicsQuantitative Biology - Molecular NetworksSustained oscillationsMathematics - Dynamical SystemsHopf bifurcationPhysics030102 biochemistry & molecular biologyGeneral Immunology and MicrobiologyFutile cycleApplied MathematicsQuantitative Biology::Molecular NetworksGeneral Medicine030104 developmental biologyClassical mechanicsMathematics - Classical Analysis and ODEsModeling and SimulationFOS: Biological sciencessymbolsPeriodic orbitsGeneral Agricultural and Biological SciencesMathematical biosciences
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bookdown: Authoring Books and Technical Documents with R Markdown

2018

0301 basic medicineStatistics and Probabilitybusiness.industry030232 urology & nephrologycomputer.software_genreTechnical documentationWorld Wide Web03 medical and health sciences030104 developmental biology0302 clinical medicineMedicineStatistics Probability and Uncertaintybusinesslcsh:Statisticslcsh:HA1-4737computerSoftwareMarkdownJournal of Statistical Software
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Fluorinated Chaperone−β-Cyclodextrin Formulations for β-Glucocerebrosidase Activity Enhancement in Neuronopathic Gaucher Disease

2017

Amphiphilic glycomimetics encompassing a rigid, undistortable nor-tropane skeleton based on 1,6-anhydro-L-idonojirimycin and a polyfluorinated antenna, when formulated as the corresponding inclusion complexes with β-cyclodextrin (βCD), have been shown to behave as pharmacological chaperones (PCs) that efficiently rescue lysosomal β- glucocerebrosidase mutants associated to the neuronopathic variants of Gaucher disease (GD), including the highly refractory L444P/L444P and L444P/P415R single nucleotide polymorphs, in patient fibroblasts. The body of work here presented includes the design criteria for the PC prototype, the synthesis of a series of candidates, the characterization of the PC:βC…

0301 basic medicineStereochemistryMutantNeuronopathic Gaucher Disease03 medical and health sciencesGlucocerebrosidase activityDrug DiscoveryAmphiphileHumansIn patientNucleotideCells Culturedchemistry.chemical_classificationGaucher DiseasebiologyCyclodextrinChemistrybeta-CyclodextrinsFluorine3. Good healthMolecular Docking Simulation030104 developmental biologyBiochemistryChaperone (protein)biology.proteinGlucosylceramidaseMolecular MedicineMolecular ChaperonesJournal of Medicinal Chemistry
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Towards Self-explanatory Ontology Visualization with Contextual Verbalization

2016

Ontologies are one of the core foundations of the Semantic Web. To participate in Semantic Web projects, domain experts need to be able to understand the ontologies involved. Visual notations can provide an overview of the ontology and help users to understand the connections among entities. However, the users first need to learn the visual notation before they can interpret it correctly. Controlled natural language representation would be readable right away and might be preferred in case of complex axioms, however, the structure of the ontology would remain less apparent. We propose to combine ontology visualizations with contextual ontology verbalizations of selected ontology (diagram) e…

0301 basic medicineStructure (mathematical logic)Computer sciencebusiness.industry05 social sciences050301 educationRepresentation (arts)Ontology (information science)computer.software_genreNotationlanguage.human_languageDomain (software engineering)03 medical and health sciences030104 developmental biologyControlled natural languagelanguageArtificial intelligencebusiness0503 educationcomputerSemantic WebNatural language processingAxiom
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Collapsibility of the internal jugular veins in the lateral decubitus body position: A potential protective role of the cerebral venous outflow again…

2019

Recent research has revealed that patients with neurodegenerative disease sleep longer in the supine position, while healthy controls prefer sleeping in the lateral decubitus position. Thus, sleeping in the lateral position seems to be protective against neurodegeneration. It has also been suggested that a protective role of this body position could be associated with better cerebral venous drainage in this body position, which results in more active glymphatic system of the brain (the system responsible for clearance of the cerebral tissue from waste products, e.g. amyloid-β). Since no published evidence exists regarding venous outflow from the cranial cavity in the lateral decubitus posit…

0301 basic medicineSupine positionModels NeurologicalPostureBlood PressurePilot ProjectsLateral decubitus positionSitting03 medical and health sciencesHabits0302 clinical medicineAlzheimer DiseaseReference Valuesmental disordersCranial cavitymedicineLateral Decubitus PositionSupine PositionHumansNeurodegenerationInternal jugular veinhealth care economics and organizationsUltrasonographyRight Lateral Decubitus PositionAquaporin 4business.industryNeurodegenerationHemodynamicsGeneral MedicineAnatomyAlzheimer's diseasemedicine.diseaseCerebral Veins030104 developmental biologymedicine.anatomical_structureCerebrovascular CirculationPulsatile FlowNerve Degenerationcardiovascular systemInternal jugular veinGlymphatic systemJugular VeinsbusinessSleepGlymphatic System030217 neurology & neurosurgeryBlood Flow VelocityMedical hypotheses
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Circadian Rhythm Variations and Nutrition in Children

2018

AbstractCircadian rhythms are the changes in biological processes that occur on a daily basis. Among these processes are reactions involved in metabolic homeostasis. Circadian rhythms are structured by the central clock in the suprachiasmatic nucleus of the hypothalamus via the control of melatonin expression. Circadian rhythms are also controlled by the peripheral clocks, which are intracellular mechanisms composed of the clock genes, whose expression follows a circadian pattern. Circadian rhythms are impacted by signals from the environment called zeitgebers, or time givers, which include light exposure, feeding schedule and composition, sleeping schedule and pattern, temperature, and phy…

0301 basic medicineSuprachiasmatic nucleusMetabolic homeostasisBiologyMelatoninCLOCK03 medical and health sciences030104 developmental biology0302 clinical medicineHypothalamusPediatrics Perinatology and Child HealthZeitgebermedicineSurgeryCircadian rhythmNeuroscience030217 neurology & neurosurgerymedicine.drugLight exposureJournal of Child Science
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Under pressure: phenotypic divergence and convergence associated with microhabitat adaptations in Triatominae

2021

AbstractBackgroundTriatomine bugs, the vectors of Chagas disease, associate with vertebrate hosts in highly diverse ecotopes. When these blood-sucking bugs adapt to new microhabitats, their phenotypes may change. Although understanding phenotypic variation is key to the study of adaptive evolution and central to phenotype-based taxonomy, the drivers of phenotypic change and diversity in triatomines remain poorly understood.Methods/FindingsWe combined a detailed phenotypic appraisal (including morphology and morphometrics) with mitochondrialcytband nuclear ITS2 DNA-sequence analyses to studyRhodnius ecuadoriensispopulations from across the species’ range. We found three major, naked-eye phen…

0301 basic medicineSystematicsEntomologyChagas diseaseRange (biology)030231 tropical medicineRhodniuslcsh:Infectious and parasitic diseases03 medical and health sciences0302 clinical medicineNestbiology.animalSystematicsPeruparasitic diseasesGeneticsAnimalsHumanslcsh:RC109-216Selection GeneticTriatominaeEcosystemPhylogenyMorphometricsPhylogenetic treebiologyResearchCorrectionVertebratePhenotypic traitbiology.organism_classificationAdaptation PhysiologicalBiological EvolutionInsect VectorsPhylogeography030104 developmental biologyInfectious DiseasesPhenotypeHabitatEvolutionary biologyRhodniusParasitologyTaxonomy (biology)EcuadorTriatominaeMorphometricsParasites & Vectors
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The hidden diversity of lichenized Trebouxiophyceae (Chlorophyta).

2018

The class Trebouxiophyceae is comprised of coccoid to ellipsoid unicells, filaments, blades and colony-forming species of green algae occurring in diverse terrestrial and aquatic environments. Some representatives have evolved parasitic heterotrophic lifestyles, others have been investigated for their biotechnological potential and others have evolved as integral components of lichen symbioses. In this review, we provide an overview of the current understanding of diversity, taxonomy and evolutionary context for the important lichen-forming algal class Trebouxiophyceae (Chlorophyta). In particular, we focus on members of the family Trebouxiaceae (Trebouxiales), the best-known, most widespre…

0301 basic medicineSystematicsSystematicPlant ScienceChlorophytaAquatic ScienceBiologyPhylogenticAsterochloriAsterochloris; Coexistence; Ecology; Genomic; Microalgae; Phylogentics; Species; Systematic03 medical and health sciencesSpecieTrebouxialesPhylogeneticsMicroalgaeLichenSpeciesEcologyEcologyTrebouxiophyceaeAsterochlorisbiology.organism_classificationPhylogentics030104 developmental biologyGenomicTaxonomy (biology)Green algaeCoexistence
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Time to activin on pathogenic T cells

2020

In multiple sclerosis (MS), Th17 cells are critical drivers of autoimmune central nervous system (CNS) inflammation and demyelination. Th17 cells exhibit functional heterogeneity fostering both pathogenic and nonpathogenic, tissue-protective functions. Still, the factors that control Th17 pathogenicity remain incompletely defined. Here, using experimental autoimmune encephalomyelitis, an established mouse MS model, we report that therapeutic administration of activin-A ameliorates disease severity and alleviates CNS immunopathology and demyelination, associated with decreased activation of Th17 cells. In fact, activin-A signaling through activin-like kinase-4 receptor represses pathogenic t…

0301 basic medicineT-Lymphocytesmedicine.medical_treatmentAutoimmune Diseases03 medical and health sciences0302 clinical medicineCerebrospinal fluidImmune systemCommentariesDemyelinating diseaseMedicineCytotoxic T cellNeuroinflammationInflammationMultidisciplinaryVirulencebusiness.industryMultiple sclerosisBiological Sciencesmedicine.diseaseActivins030104 developmental biologyCytokineImmunologybusinessCD8030215 immunologyProceedings of the National Academy of Sciences
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The mRNA cap-binding protein Cbc1 is required for high and timely expression of genes by promoting the accumulation of gene-specific activators at pr…

2015

The highly conserved Saccharomyces cerevisiae cap-binding protein Cbc1/Sto1 binds mRNA co-transcriptionally and acts as a key coordinator of mRNA fate. Recently, Cbc1 has also been implicated in transcription elongation and pre-initiation complex (PIC) formation. Previously, we described Cbc1 to be required for cell growth under osmotic stress and to mediate osmostress-induced translation reprogramming. Here, we observe delayed global transcription kinetics in cbc1Δ during osmotic stress that correlates with delayed recruitment of TBP and RNA polymerase II to osmo-induced promoters. Interestingly, we detect an interaction between Cbc1 and the MAPK Hog1, which controls most gene expression c…

0301 basic medicineTBX1Saccharomyces cerevisiae ProteinsTranscription GeneticBiophysicsRNA polymerase IISaccharomyces cerevisiaeBiochemistry03 medical and health sciencesOsmotic PressureStructural BiologyTranscription (biology)Gene Expression Regulation FungalGene expressionGeneticsRNA MessengerMolecular BiologyTranscription factorTranscription Initiation GeneticbiologyActivator (genetics)Nuclear ProteinsPromoterMolecular biology030104 developmental biologyRNA Cap-Binding Proteinsbiology.proteinMitogen-Activated Protein KinasesCREB1Transcription FactorsBiochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms
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