Search results for "ECOLOGY"

showing 10 items of 15385 documents

Inferring Phytoplankton, Terrestrial Plant and Bacteria Bulk δ¹³C Values from Compound Specific Analyses of Lipids and Fatty Acids.

2015

Stable isotope mixing models in aquatic ecology require δ13C values for food web end members such as phytoplankton and bacteria, however it is rarely possible to measure these directly. Hence there is a critical need for improved methods for estimating the δ13C ratios of phytoplankton, bacteria and terrestrial detritus from within mixed seston. We determined the δ13C values of lipids, phospholipids and biomarker fatty acids and used these to calculate isotopic differences compared to the whole-cell δ13C values for eight phytoplankton classes, five bacterial taxa, and three types of terrestrial organic matter (two trees and one grass). The lipid content was higher amongst the phytoplankton (…

ved/biology.organism_classification_rank.speciesta1172lcsh:MedicineAlgaeaquatic ecologyterrestrial plantsPhytoplanktonTerrestrial plantBotanyMetabolomics14. Life underwaterBiomasslcsh:Sciencevesiekologia2. Zero hungerBiomass (ecology)Carbon IsotopesMultidisciplinaryDetritusbiologyδ13CBacteriaved/biologyStable isotope ratioSestonFatty Acidsfungilcsh:R15. Life on landbiology.organism_classificationLipidsbacteria bulk13. Climate actionEnvironmental chemistryPhytoplanktonphytoplanktonta1181lcsh:QBiomarkersResearch ArticlePLoS ONE
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Regional metacommunities in two coastal systems: spatial structure and drivers of plant assemblages

2014

Aim Biogeographical patterns in metacommunities are still poorly understood, and different processes are expected to occur in different habitats. We analysed the regional plant metacommunities of coastal habitats to test whether (1) the influence of space and climate differs between two habitats differentiated along the seashore–inland gradient, and (2) regional variation in species composition of these habitats can be ascribed to different metacommunity paradigms. Location The entire coast of the Iberian Peninsula, south-western Europe. Methods We collected data on the plant species composition of coastal sites on sand dunes across 3000 km of coastline. The sites were classified into two h…

vegetation databasesMetacommunityMediterranean climateDistance decaydune habitatsmetacommunityEcologyCommunity assemblyEcologydistance decaySpecies sortingenvironmental filtering15. Life on landdispersal limitationSand dune stabilizationGeographyHabitatSpatial ecologyOrdination14. Life underwaterspecies sortingCommunity assembly dispersal limitation distance decay dune habitats environmental filtering Iberian Peninsula metacommunity species sorting vegetation databasesEcology Evolution Behavior and SystematicsIberian PeninsulaJournal of Biogeography
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Holocene sea level change in Malta

2013

A multidisciplinary approach has been applied to study sea level changes along the coast of Malta using data collected from underwater archaeological remains. The elevation of archaeological markers have been compared with predicted sea level curves providing new bodies of evidence that outline the vertical tectonic behaviour of this region, allowing estimation of the relative sea level changes that occurred in this area of the Mediterranean since the Bronze Age. During the Roman Age, sea level was at −1.36 ± 0.1 m, while in the Midde Age it was at −0.56 ± 0.2 m, in agreement with previous estimations for the Mediterranean region. Data indicate that Malta was tectonically stable during the …

vertical movementMediterranean climateClimatic changes -- MaltaSea level -- MaltaSettore GEO/02 - Geologia Stratigrafica E SedimentologicaPleistoceneMaltaSettore GEO/03 - Geologia StrutturaleSettore GEO/04 - Geografia Fisica E GeomorfologiaElevationLast Glacial Maximumrelative sea level changePaleoecology -- Maltarelative sea level change; Late Holocene; MaltaLate HoloceneTectonicsPaleontologyPalynology -- MaltaBronze Agesealevel changeHoloceneGeologySea levelEarth-Surface Processes
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Assessing the conservation priority of freshwater lake sites based on taxonomic, functional and environmental uniqueness

2022

Aim We propose a novel approach that considers taxonomic uniqueness, functional uniqueness and environmental uniqueness and show how it can be used in guiding conservation planning. We illustrate the approach using data for lake biota and environment. Location Lake Puruvesi, Finland. Methods We sampled macrophytes and macroinvertebrates from the same 18 littoral sites. By adapting the original “ecological uniqueness” approach, we used distance-based methods to calculate measures of taxonomic (LCBD–t), functional (LCBD–f) and environmental (LCEH) uniqueness for each site. We also considered the numbers and locations of the sites needed to protect up to 70% of total variation in taxonomic, fu…

vesiensuojeluympäristötekijätmacroinvertebratesjärvetPuruvesiconservation assessmenteliöstöSuomilakesfreshwatersEcology Evolution Behavior and Systematicsbiodiversityecological uniquenessvesiekosysteemitselkärangattomatenvironmental heterogeneityekologiaheterogeenisuusbiodiversiteettimacrophytespriorisointimakea vesiluonnonsuojeluvesikasvitarviointiDiversity and Distributions
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Short-term responses of Rana arvalis tadpoles to pH and predator stress: adaptive divergence in behavioural and physiological plasticity?

2022

Environmental stress is a major driver of ecological and evolutionary processes in nature. To cope with stress, organisms can adjust through phenotypic plasticity and/or adapt through genetic change. Here, we compared short-term behavioural (activity) and physiological (corticosterone levels, CORT) responses of Rana arvalis tadpoles from two divergent populations (acid origin, AOP, versus neutral origin, NOP) to acid and predator stress. Tadpoles were initially reared in benign conditions at pH 7 and then exposed to a combination of two pH (acid versus neutral) and two predator cue (predator cue versus no predator cue) treatments. We assessed behavioural activity within the first 15 min, an…

viitasammakkoRanidaePhysiologyPhenotypic plasticityBiochemistryphenotypic plasticityeläinten käyttäytyminenkortikosteroniRana arvalisEndocrinologyAdaptive divergencehappamoituminenAnimalsBehaviourAdaptive divergence; Behaviour; Corticosterone; Phenotypic plasticity; Rana arvalisEcology Evolution Behavior and Systematicshormonaaliset vaikutuksetsopeutuminenadaptive divergencecorticosteronestressiHydrogen-Ion ConcentrationMiljövetenskapsaalistusbehaviourLarvaPredatory BehaviorAnimal Science and ZoologyCorticosteroneEnvironmental Sciencesympäristönmuutoksetfysiologiset vaikutukset
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Apoptosis in human unfertilized oocytes after intracytoplasmic sperm injection

2005

Objective To investigate the presence of programmed cell death in unfertilized oocytes after intracytoplasmic sperm injection (ICSI), assuming that previous apoptotic events could be correlated with the fertilization failure. Design Comparison of the rate of DNA fragmentation in human oocytes at different stages of maturation soon after pick-up (control) and in unfertilized oocytes after ICSI treatment. Setting In vitro fertilization (IVF) laboratory with extensive ICSI experience. Patient(s) Sixty-three patients undergoing assisted fertilization by ICSI. Intervention(s) Terminal deoxynucleotidyl transferase-mediated digoxigenin-dUTP nick-end labeling (TUNEL) assay and anticaspase-3 cleaved…

virgin oocytesmedicine.medical_treatmentintracytoplasmic sperm injectionApoptosisDNA FragmentationBiologyICSIIntracytoplasmic sperm injectionAndrologyHuman fertilizationhuman oocyteConfidence IntervalsmedicineHumansSperm Injections Intracytoplasmicreproductive and urinary physiologyFertilisationApoptosis; fertilization failure; intracytoplasmic sperm injection; ICSI; human oocytes; virgin oocytesChi-Square DistributionIn vitro fertilisationTUNEL assayurogenital systemfertilization failureApoptosiObstetrics and GynecologyOocyteSpermmedicine.anatomical_structureReproductive MedicineOocytesDNA fragmentationFemaleFertility and Sterility
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Genome sequence of SeIV-1, a novel virus from the Iflaviridae family infective to Spodoptera exigua

2011

Analysis of the transcriptome of Spodoptera exigua larvae revealed the presence of several ESTs with homology to virus of the order Picornavirales and with the highest similarity to Infectious flacherie virus (Iflaviridae) that infects Bombyx mori larvae. Iflaviridae is a recently defined family of insect-infecting viruses that consist of positive single strand RNA genomes translated into a single polyprotein of around 3000 amino acids long. Using the sequence information derived from the obtained ESTs, we have completed the genomic sequence of this virus. The novel S. exigua iflavirus (SeIV-1) has a genome of 10.3 kb and codes for a 3222 aa polyprotein. Expression analysis has revealed the…

virusesMolecular Sequence DataInsect VirusesSpodopteraSpodopteraGenomeVirusRNA Virus InfectionsExiguaAnimalsRNA VirusesAmino Acid SequencePest Control BiologicalEcology Evolution Behavior and SystematicsExpressed Sequence TagsViral Structural ProteinsGeneticsInfectivityGenomebiologyfungibiology.organism_classificationVirologyIntestinesIflaviridaeNovel virusHost-Pathogen InteractionsRNA ViralPicornaviralesJournal of Invertebrate Pathology
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Molecular Characterization of a Variant of Bacillus anthracis-Specific Phage AP50 with Improved Bacteriolytic Activity▿ †

2008

ABSTRACT The genome sequence of a Bacillus anthracis -specific clear plaque mutant phage, AP50c, contains 31 open reading frames spanning 14,398 bp, has two mutations compared to wild-type AP50t, and has a colinear genome architecture highly similar to that of gram-positive Tectiviridae phages. Spontaneous AP50c-resistant B. anthracis mutants exhibit a mucoid colony phenotype.

virusesMutantMolecular Sequence DataMutation MissenseGenetics and Molecular BiologyBacillus PhagesGenome ViralViral Plaque AssayApplied Microbiology and BiotechnologySyntenyBacteriophageBacteriolysisGene OrderPoint MutationBacillus (shape)Whole genome sequencingGeneticsEcologybiologyBase SequenceTectivirusVirionSequence Analysis DNAbiology.organism_classificationBacillus anthracisOpen reading frameBacillus anthracisDNA ViralTectiviridaeFood ScienceBiotechnologyTectiviridae
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Lipid-related thiamine deficiency cause mortality of river lampreys (Lampetra fluviatilis) during pre-spawning fasting

2023

Publisher Copyright: © 2023 The Authors River lampreys (Lampetra fluviatilis) were caught in the fall 2014 on entering the River Perhonjoki for spawning and kept at a hatchery until spawning in late spring 2015 to produce larvae for compensatory stockings. Since the lampreys died massively from early February onwards, they were investigated in March and May to clarify the cause of the deaths. The symptoms in lampreys resembled those of lipid-related thiamine (vitamin B1) deficiency of salmonines, called the M74 syndrome in the Baltic Sea area. Because the lipid content of lampreys was known to be high, thiamine concentrations were analyzed in the liver and ovulated unfertilized eggs, and th…

vitamin B1vaelluskalatthiamine deficiencyEcologyBody lipidnahkiainen1184 Genetics developmental biology physiologylipiditAquatic SciencepuutostilatLampetra fluviatiliskuolemansyytM74 syndromebody lipidpre-spawning fastingThiamine deficiencylamprey Lampetra fluviatilisAnimal Science and ZoologytiamiiniLamprey Lampetra fluviatilisPre-spawning fastingEcology Evolution Behavior and SystematicsVitamin B1
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Regional Farmers’ Perception and Societal Issues in Vineyards Affected by High Erosion Rates

2021

We explore the current situation in a viticultural region in Eastern Spain from a holistic and multifaceted research approach, which allowed us to understand the biophysical conditions, economic cost, social impact, and perception of the farmers’ community to the use of catch crops. A survey of the perception of the farmers, and an assessment of the biophysical impact of catch crops (CC) and tillage (C = Control plot) on soil organic matter, bulk density, infiltration capacity (single ring infiltrometer), and runoff generation and soil erosion (rainfall simulation experiments) was carried out. Two representative fields as study sites were selected in Les Alcusses valley, within Els Alforins…

viticultural areasLand managementcatch crops010501 environmental sciences01 natural sciencessoillcsh:AgricultureAgricultural scienceEconomic cost0105 earth and related environmental sciencesNature and Landscape ConservationGlobal and Planetary ChangeEcologySoil organic matterland managementlcsh:SSubsidy04 agricultural and veterinary sciencessustainabilityTillageGeographyregional geographical approach040103 agronomy & agricultureLand degradation0401 agriculture forestry and fisheriesCatch cropSurface runoffLand
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