Search results for "ETL"

showing 10 items of 431 documents

Limnology and Aquatic Microbial Ecology of Byers Peninsula: A Main Freshwater Biodiversity Hotspot in Maritime Antarctica

2019

Here we present a comprehensive review of the diversity revealed by research in limnology and microbial ecology conducted in Byers Peninsula (Livingston Island, South Shetland Islands, Antarctica) during the last two decades. The site constitutes one of the largest ice-free areas within the Antarctic Peninsula region. Since it has a high level of environmental protection, it is less human-impacted compared to other sites within the South Shetland archipelago. The main investigations in Byers Peninsula focused on the physical and chemical limnology of the lakes, ponds, rivers, and wetlands, as well as on the structure of their planktonic and benthic microbial communities, and on the function…

0106 biological sciencesvirioplankton010504 meteorology & atmospheric sciencesLimnologyWetlandmaritime antarctica01 natural sciencesPeninsulabyers peninsulalcsh:QH301-705.50105 earth and related environmental sciencesNature and Landscape ConservationprotistsShetlandFunctional ecologygeographygeography.geographical_feature_categoryEcologyEcologybacterioplankton010604 marine biology & hydrobiologyEcological Modelingmicrobial matsPlanktonAgricultural and Biological Sciences (miscellaneous)lcsh:Biology (General)Productivity (ecology)Benthic zonenext-generation sequencingDiversity
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Improvement of lateral connectivity in a sector of River Hârtibaciu (Olt/Danube Basin)

2017

Abstract The Hârtibaciu River in the Alţâna area has a disturbed lateral connectivity owing to its lateral embankments, as a result of which fish communities in this river sector are negatively influenced. The method of obtaining the water supply for a new proposed wetland is by gravitation, and any excessive water supply to the wetland will be controled and directed to the Hârtibaciu River in a natural manner. A state-of-the-art man-made wetland should increase the quality of the habitat for local fish communities, especially for the Rhodeus sericeus population, which is a species of conservation interest.

0208 environmental biotechnologyPopulationWater supplyWetlandalțâna02 engineering and technology010501 environmental sciencesStructural basin01 natural sciencesNatural (archaeology)anodonta cygneaRhodeus sericeuseducationQH540-549.50105 earth and related environmental scienceseducation.field_of_studygeographygeography.geographical_feature_categorybiologyEcologybusiness.industryconservationAquatic animalbiology.organism_classification020801 environmental engineeringHabitatlotic systemrhodeus sericeusEnvironmental scienceWater resource managementbusinessTransylvanian Review of Systematical and Ecological Research
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Validation of ADAM10 metalloprotease as aBacillus thuringiensisCry3Aa toxin functional receptor in Colorado potato beetle (Leptinotarsa decemlineata)

2016

Bacillus thuringiensis parasporal crystal proteins (Cry proteins) are insecticidal pore-forming toxins that bind to specific receptor molecules on the brush border membrane of susceptible insect midgut cells to exert their toxic action. In the Colorado potato beetle (CPB), a coleopteran pest, we previously proposed that interaction of Cry3Aa toxin with a CPB ADAM10 metalloprotease is an essential part of the mode of action of this toxin. Here, we annotated the gene sequence encoding an ADAM10 metalloprotease protein (CPB-ADAM10) in the CPB genome sequencing project, and using RNA interference gene silencing we demonstrated that CPB-ADAM10 is a Cry3Aa toxin functional receptor in CPB. Cry3Aa…

0301 basic medicineBrush bordermedicine.diagnostic_testbiologyToxinProteolysis030106 microbiologyColorado potato beetleMidgutmedicine.disease_causebiology.organism_classificationMicrobiology03 medical and health sciencessurgical procedures operative030104 developmental biologyBiochemistryRNA interferenceInsect ScienceBacillus thuringiensisGeneticsmedicineReceptorMolecular Biologycirculatory and respiratory physiologyInsect Molecular Biology
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Marinomonas spartinae sp. nov., a novel species with plant-beneficial properties.

2016

Two strains of Gram-stain-negative, chemo-organotrophic, aerobic and halophilic gammaproteobacteria, isolated from within the stem and roots of Spartina maritima in salt marshes from the south Atlantic Spanish coast, were found to represent a novel species in the genus Marinomonas through phylogenetic analysis of their 16S rRNA genes and phenotypic characterization. 16S rRNA gene sequences of the two strains shared < 96.2 % similarity with other Marinomonas species, with Marimonas alcarazii being the most similar in sequence. They required sodium ions for growth, were able to thrive at low (4 °C) temperatures and at salinities of 12–15 %, were unable to hydrolyse any tested macromolecule ex…

0301 basic medicineDNA BacterialMarinomonasMolecular Sequence DataBiologyPoaceaeMicrobiologyPlant Roots03 medical and health sciencesRNA Ribosomal 16SGammaproteobacteriaBotanyEndophytesSugarMarinomonasEcology Evolution Behavior and SystematicsPhylogenychemistry.chemical_classificationBase CompositionPhylogenetic treePlant StemsFatty AcidsNucleic Acid HybridizationGeneral MedicineSequence Analysis DNA16S ribosomal RNAbiology.organism_classificationHalophileAmino acidBacterial Typing Techniques030104 developmental biologychemistrySpainWetlandslipids (amino acids peptides and proteins)Spartina maritimaInternational journal of systematic and evolutionary microbiology
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Discovery of phloeophagus beetles as a source of pseudomonas strains that produce potentially new bioactive substances and description of pseudomonas…

2018

15 páginas, 6 tablas, 2 figuras. -- First publication is due to Frontiers Media

0301 basic medicineMicrobiology (medical)antibiotic resistanceAntibiotic resistance030106 microbiologylcsh:QR1-502anticarcinogenicBiologyMicrobiologyNRPS-PKSantimicrobialslcsh:MicrobiologyMicrobiology03 medical and health sciencesBacteriocinPseudomonas luteaBark beetlesGenome mininggenome miningAntiviralOriginal ResearchAntimicrobialsSecondary metabolitesPseudomonas16S ribosomal RNArpoBAntimicrobialbiology.organism_classificationantiviralAnticarcinogenic030104 developmental biologybark beetlesBacteriaPseudomonas abietaniphila
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Using GFP-Tagged Escherichia coli to Investigate the Persistence of Fecal Bacteria in Vegetated Wetlands: An Experimental Approach

2020

The contamination of surface water by pathogenic bacteria of human origin is an important public health issue. Wetlands can be contaminated with fecal bacteria by water originating from different sources, such as wastewater treatment plants and agriculture. Escherichia coli is a commensal of the human gut flora and the major indication of fecal contamination in surface water. Little is known about the association between fecal bacteria and submerged macrophytes and how this may influence the water quality. We questioned whether macrophytes enhance or inhibit the bacterial growth in wetlands. For this purpose, we grew four different species of macrophytes (Mentha aquatica, Baldellia ranuncul…

0301 basic medicineMicrobiology (medical)antimicrobial compoundantimicrobial compounds[SDE.MCG]Environmental Sciences/Global ChangesElodea canadensisWetland010501 environmental sciencesmedicine.disease_causeGFP01 natural sciencesBiochemistryMicrobiologywetlands03 medical and health sciencesAquatic plantBotanymedicineEscherichia coliPharmacology (medical)General Pharmacology Toxicology and PharmaceuticsEscherichia coliComputingMilieux_MISCELLANEOUS0105 earth and related environmental sciences[SDV.EE]Life Sciences [q-bio]/Ecology environmentgeographymacrophytegeography.geographical_feature_categorybiology<i>Escherichia coli</i>lcsh:RM1-950food and beverages15. Life on landbiology.organism_classification6. Clean waterSparganium emersumwetlandMacrophytemacrophytesFecal coliform030104 developmental biologyInfectious Diseaseslcsh:Therapeutics. Pharmacology[SDV.MP]Life Sciences [q-bio]/Microbiology and Parasitologyfecal bacteriaWater quality
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Microbial diversity along a gradient in peatlands treating mining-affected waters.

2018

Peatlands are used for the purification of mining-affected waters in Northern Finland. In Northern climate, microorganisms in treatment peatlands (TPs) are affected by long and cold winters, but studies about those microorganisms are scarce. Thus, the bacterial, archaeal and fungal communities along gradients of mine water influence in two TPs were investigated. The TPs receive waters rich in contaminants, including arsenic (As), sulfate (SO42-) and nitrate (NO3-). Microbial diversity was high in both TPs, and microbial community composition differed between the studied TPs. Bacterial communities were dominated by Proteobacteria, Actinobacteria, Chloroflexi and Acidobacteria, archaeal commu…

0301 basic medicinePeatmetal toleranceMicroorganismta1172030106 microbiologyMicrobial metabolismBiologyApplied Microbiology and BiotechnologyMicrobiologyMiningwetlandsActinobacteriaWater Purificationkosteikot03 medical and health sciencessulfate reductionfungal ITScontaminant removalturvemaatFinlandSoil Microbiologyjäteveden käsittelykaivostoimintaEcologyBacteriaMicrobiotaFungiBiodiversity15. Life on landbiology.organism_classificationArchaeabiodiversiteetti030104 developmental biologyMicrobial population biology13. Climate actionEnvironmental chemistrymikro-organismitkaivosvesiProteobacteriaSoil microbiologyWater Pollutants ChemicalAcidobacteriaFEMS microbiology ecology
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Microbiome-assisted carrion preservation aids larval development in a burying beetle

2018

Significance Ephemeral diets such as carrion are high-quality resources that are susceptible to microbial spoilage. Carrion-feeding insects that breed on decaying carcasses must overcome challenges arising from competing microbes. Here we report that a carrion-feeding burying beetle preserves carcasses by regulating its microbial growth, resulting in changes in its biochemical properties including the reduction of toxic polyamines associated with putrefaction and nutrient loss. The beetle’s microbial symbionts form a biofilm-like matrix on carcasses, which is important for optimal larval development. The beetles and their microbiome thus coordinate a specialized adaptive strategy of carrion…

0301 basic medicineZoologyDecomposer03 medical and health scienceschemistry.chemical_compoundCadaverinePutrescineinsect nutritionAnimalsCarrionMicrobiomeresource competitionLarvaCadaverineMultidisciplinaryEcologygut microbiotaBacteriabiologyMicrobiotafungusfungiFungifood and beveragesBiological Sciencesbiology.organism_classificationNicrophorus vespilloidessymbiosisColeoptera030104 developmental biologyMicrobial population biologychemistryBiofilmsLarvaBurying beetleTranscriptome
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Bacterial community diversity harboured by interacting species

2016

International audience; All animals are infected by microbial partners that can be passengers or residents and influence many biological traits of their hosts. Even if important factors that structure the composition and abundance of microbial communities within and among host individuals have been recently described, such as diet, developmental stage or phylogeny, few studies have conducted cross-taxonomic comparisons, especially on host species related by trophic relationships. Here, we describe and compare the microbial communities associated with the cabbage root fly Delia radicum and its three major parasitoids: the two staphylinid beetles Aleochara bilineata and A. bipustulata and the…

0301 basic medicine[SDV]Life Sciences [q-bio]lcsh:MedicinespeciesArtificial Gene Amplification and ExtensionPathogenesisPathology and Laboratory MedicinephylogenycabbagegenusPolymerase Chain ReactiongeographyParasitoidAbundance (ecology)[ SDV.MP ] Life Sciences [q-bio]/Microbiology and ParasitologyMedicine and Health SciencesRickettsialcsh:ScienceTrophic levelMultidisciplinarybiologyEcologyMicrobiotabeetleGenomicsBiodiversityBacterial PathogensInsectsColeopterasymbiont[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologypyrosequencingMedical MicrobiologyHost-Pathogen Interactions[SDE]Environmental SciencesWolbachiaFrancePathogensmicrobial communityWolbachiaResearch ArticleArthropodaSpiroplasmaMollicutesSpiroplasmaMicrobial GenomicsResearch and Analysis MethodsMicrobiology03 medical and health sciencesPhylogeneticsGeneticsAnimals[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyMolecular Biology TechniquesMolecular BiologyMicrobial PathogensparasitoidBacteriaHost (biology)Dipteralcsh:RfungiOrganismsBiology and Life Sciencesbiology.organism_classificationInvertebratesHymenoptera030104 developmental biologylcsh:QMicrobiomeDelia radicum
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Burying beetles regulate the microbiome of carcasses and use it to transmit a core microbiota to their offspring

2017

Necrophagous beetles utilize carrion, a highly nutritious resource that is susceptible to intense microbial competition, by treating it with antimicrobial anal and oral secretions. However, how this regulates the carcass microbiota remains unclear. Here, we show that carcasses prepared by the burying beetle Nicrophorus vespilloides undergo significant changes in their microbial communities subsequent to their burial and ‘preparation’. Prepared carcasses hosted a microbial community that was more similar to that of beetles’ anal and oral secretions than to the native carcass community or the surrounding soil, indicating that the beetles regulated the carcass microbiota. A core microbial comm…

0301 basic medicineanimal diseasesmedia_common.quotation_subjectEnterococcaceaeCompetition (biology)03 medical and health sciencesfluids and secretionsEnterococcaceaeGeneticsAnimalsCarrionMicrobiomeSymbiosisEcology Evolution Behavior and Systematicsmedia_commonbiologyEcologyMicrobiotadigestive oral and skin physiologyXanthomonadaceaetechnology industry and agriculturefood and beveragesbiology.organism_classificationNicrophorus vespilloidesColeoptera030104 developmental biologyMicrobial population biologyLarvaBurying beetleDigestive SystemMolecular Ecology
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