Search results for "EXTRACTION"

showing 10 items of 2072 documents

Inter-laboratory evaluation of the ISO standard 11063 "Soil quality - Method to directly extract DNA from soil samples"

2011

International audience; Extracting DNA directly from micro-organisms living in soil is a crucial step for the molecular analysis of soil microbial communities. However, the use of a plethora of different soil DNA extraction protocols, each with its own bias, makes accurate data comparison difficult. To overcome this problem, a method for soil DNA extraction was proposed to the International Organization for Standardization (ISO) in 2006. This method was evaluated by 13 independent European laboratories actively participating in national and international ring tests. The reproducibility of the standardized method for molecular analyses was evaluated by comparing the amount of DNA extracted, …

Microbiology (medical)DNA BacterialMicrobiological TechniquesStandardizationSoil testRibosomal Intergenic Spacer analysis[ SDV.TOX.ECO ] Life Sciences [q-bio]/Toxicology/EcotoxicologyBiologyMicrobiologyDNA Ribosomal[ SDE ] Environmental Sciences03 medical and health sciencesRNA Ribosomal 16SMolecular BiologySoil Microbiology030304 developmental biology2. Zero hungerProtocol (science)0303 health sciences030306 microbiologyEcologybusiness.industryDNA FINGERPRINTReproducibility of ResultsDNAInter-laboratory assay15. Life on landSoil DNA extraction; Standardization; Inter-laboratory assaySoil qualityDNA FingerprintingStandardizationBiotechnologyBacterial Typing TechniquesQPCRDNA profilingSoil water[SDE]Environmental Sciencessoil DNA extraction ; standardization ; inter-laboratory assay ; DNA fingerprint ; qPCR[SDV.TOX.ECO]Life Sciences [q-bio]/Toxicology/EcotoxicologybusinessSoil DNA extractionSoil microbiology
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Impact of DNA Extraction Method on Variation in Human and Built Environment Microbial Community and Functional Profiles Assessed by Shotgun Metagenom…

2020

Both the host microbiome and the microbiome of the built environment can have profound impacts on human health. While prior studies have suggested that the variability introduced by DNA extraction method is less than typical biologic variation, most studies have focused on 16S rRNA amplicon sequencing or on high biomass fecal samples. Shotgun metagenomic sequencing provides advantages over amplicon sequencing for surveying the microbiome, but is a challenge to perform in lower microbial biomass samples with high human DNA content such as sputum or vacuumed dust. Here we systematically evaluate the impact of four different extraction methods (phenol:choloroform, and three high-throughput kit…

Microbiology (medical)lcsh:QR1-502microbiomeBiologyshotgun metagenomics sequencingMicrobiologylcsh:Microbiology03 medical and health sciencesDNA extraction methodmedicinemicrobiotaFood scienceMicrobiome030304 developmental biologyOriginal Research0303 health sciences030306 microbiologyHuman microbiomehuman microbiome16S ribosomal RNADNA extractionbuilt environmentgenomic DNAMicrobial population biologyMetagenomicsSputummedicine.symptomFrontiers in Microbiology
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Access to Phylogeny from Voltammetric Fingerprints of Seeds: the Apsparagus Case

2016

A methodology for characterizing vegetal taxonomic groups from the voltammetric fingerprints of polyphenolic components of seeds is described. It is based on recording the voltammetric response of microparticulate films deposited on glassy carbon electrodes from seed extracts using different organic solvents. The obtained responses in contact with aqueous electrolytes provided characteristic voltammetric profiles at the level of genera/subgenera and/or families using bivariant and multivariant chemometric methods. The voltammograms of 14 species from 5 different families provided family-characteristic patterns. Analysis of voltammetric responses for a set of 20 species of the Asparagus genu…

MicroextractionChromatographybiologyChemistryAsparagusVoltammetry of microparticles010401 analytical chemistryfood and beverages02 engineering and technologyAqueous electrolyteGlassy carbon021001 nanoscience & nanotechnologybiology.organism_classification01 natural sciences0104 chemical sciencesAnalytical ChemistryChemotaxonomyChemometric techniquesChemotaxonomyPhylogeneticsElectrochemistryMyrsiphyllumAsparagusSubgenus0210 nano-technology
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Substitution of carcinogenic solvent dichloromethane for the extraction of volatile compounds in a fat-free model food system

2016

International audience; Dichloromethane is known as a very efficient solvent, but, as other halogenated solvents, is recognized as a hazardous product (CMR substance). The objective of the present work is to propose substitution solvent for the extraction of volatile compounds. The most important physico-chemical parameters in the choice of an appropriate extraction solvent of volatile compounds are reviewed. Various solvents are selected on this basis and on their hazard characteristics. The selected solvents, safer than dichloromethane, are compared using the extraction efficiency of volatile compounds from a model food product able to interact with volatile compounds. Volatile compounds …

MicroextractionEthyl acetate02 engineering and technologyAcetates01 natural sciencesBiochemistryAnalytical Chemistrychemistry.chemical_compound[SDV.IDA]Life Sciences [q-bio]/Food engineeringOrganic chemistrySolubilityCyclopentaneChemistry Physical[ SDV.IDA ] Life Sciences [q-bio]/Food engineeringStarchGeneral Medicine021001 nanoscience & nanotechnologySolventVolatile compounds0210 nano-technologyEthyl acetateCyclopentanesSubstitution of CMRAcetonePolysaccharidesAzeotropeDichloromethaneCyclopentaneAzeotropeAssisted extractionMethylene ChlorideVolatile Organic CompoundsEthanolChromatographyEthanolGreen extraction010401 analytical chemistryOrganic ChemistryExtraction (chemistry)Amylose complexation0104 chemical scienceschemistrySolubilityAroma compoundsCarcinogensSolventsRosemaryAmyloseMicrowaveFood AnalysisMulticriteria decision-analysis
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Green Analytical Chemistry Past, Present and Perspectives

2019

The book explains the principles and fundamentals of Green Analytical Chemistry (GAC) and highlights the current developments and future potential of the analytical green chemistry-oriented applications of various solutions. The book consists of sixteen chapters, including the history and milestones of GAC; issues related to teaching of green analytical chemistry and greening the university laboratories; evaluation of impact of analytical activities on the environmental and human health, direct techniques of detection, identification and determination of trace constituents; new achievements in the field of extraction of trace analytes from samples characterized by complex composition of the…

MicroextractionPassive techniquesPollution remote monitoringGreen chromatographyDerivatization processGreen solventsGreen analytical techniquesGreen sorption materialsGreen Analytical ChemistryDirect techniques
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A Novel Iris Recognition System based on Micro-Features

2007

In this paper a novel approach for iris recognition system based on iris micro-features is proposed. The proposed system follows the minutiae based approach developed for fingerprint recognition systems. The proposed system uses four iris microfeatures, considered as minutiae, for identification. The individualized characteristics are nucleus, collarette, valleys and radius. Iris recognition is divided in three main phases: image preprocessing, micro-features extraction and matching. The algorithm has been tested on CASIA v1.0 iris image database obtaining an high accuracy. The obtained experimental results have been analyzed and compared with the Daugman based approach.

MinutiaeMatching (graph theory)Biometricsbusiness.industryIris recognitionFeature extractionComputingMethodologies_IMAGEPROCESSINGANDCOMPUTERVISIONPattern recognitionFingerprint recognitionComputingMethodologies_PATTERNRECOGNITIONGeographyiris micro-characteristIcs recognition systemPreprocessorComputer visionIRIS (biosensor)Artificial intelligencebusiness
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Performance evaluation of simple fingerprint minutiae extraction algorithm using crossing number on valley structure

2008

In fingerprint recognition system, performance of fingerprint feature extraction algorithm is important. We use visual analysis to evaluate this performance. 100 respondents fill a questionnaire consisting of 30 images from fingerprint feature extraction process. We get 12,3 % minutiae points missed by this algorithm. With BOZORTH3 minutiae matching algorithm, the distribution of matching score of 80-fingerprint images are presented and we obtain EER 5.89 % at threshold value 180.

MinutiaeMatching (graph theory)Computer sciencebusiness.industryFeature extractionPattern recognitionImage segmentationFingerprint recognitionFingerprintComputer visionAlgorithm designArtificial intelligencebusinessBlossom algorithm2008 International Conference on Innovations in Information Technology
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Image enhancement in simple fingerprint minutiae extraction algorithm using crossing number on valley structure

2007

In fingerprint recognition system, fingerprint feature extraction algorithm requires good quality fingerprint images to produce good results. Therefore, one step in the preprocessing stage is image enhancement to improve the quality of poor fingerprint image, so the minutiae points can be detected with good results. In this paper, we present how this enhancement process in simple minutiae detection algorithm using crossing number on valley structure improves detection of true minutiae.

MinutiaePixelComputer sciencebusiness.industryFeature extractionNormalization (image processing)Pattern recognitionFingerprint recognitionImage enhancementComputingMethodologies_PATTERNRECOGNITIONFingerprintPreprocessorComputer visionArtificial intelligencebusiness2007 International Conference on Intelligent and Advanced Systems
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Simple Fingerprint Minutiae Extraction Algorithm Using Crossing Number On Valley Structure

2007

Most of the existing fingerprint extraction techniques currently available are based on ridge structure. The ridge usually has thicker structure than the valley, so that more processing time is needed to extract the ridge than extracting the valley. Taking the advantage of the thin structure of the valley, we proposed an algorithm that reduces the time needed for minutiae extraction. The algorithm was developed in Matlab environment using fingerprint images from FVC2004. In order to show the performance of the algorithm, numerical results are presented.

MinutiaePixelbusiness.industryFeature extractionPattern recognitionFingerprint recognitionRidge (differential geometry)Facial recognition systemComputingMethodologies_PATTERNRECOGNITIONGeographyFingerprintArtificial intelligenceMATLABbusinesscomputercomputer.programming_language2007 IEEE Workshop on Automatic Identification Advanced Technologies
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An Advanced Technique for User Identification Using Partial Fingerprint

2013

User identification is a very interesting and complex task. Invasive biometrics is based on traits uniqueness and immutability over time. In forensic field, fingerprints have always been considered an essential element for personal recognition. The traditional issue is focused on full fingerprint images matching. In this paper an advanced technique for personal recognition based on partial fingerprint is proposed. This system is based on fingerprint local analysis and micro-features, endpoints and bifurcations, extraction. The proposed approach starts from minutiae extraction from a partial fingerprint image and ends with the final matching score between fingerprint pairs. The computation o…

MinutiaeSettore ING-INF/05 - Sistemi Di Elaborazione Delle InformazioniMatching (statistics)Biometricsbusiness.industryComputer scienceData_MISCELLANEOUSFeature extractionFingerprint Verification CompetitionPattern recognitionFingerprint recognitionIdentification (information)FingerprintComputer visionArtificial intelligenceUser identification Partial fingerprint Minutiae Roto-translation parametersbusiness
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