Search results for "Escher"

showing 10 items of 728 documents

Absolute and relative quantification of RNA modifications via biosynthetic isotopomers

2014

In the resurging field of RNA modifications, quantification is a bottleneck blocking many exciting avenues. With currently over 150 known nucleoside alterations, detection and quantification methods must encompass multiple modifications for a comprehensive profile. LC-MS/MS approaches offer a perspective for comprehensive parallel quantification of all the various modifications found in total RNA of a given organism. By feeding (13)C-glucose as sole carbon source, we have generated a stable isotope-labeled internal standard (SIL-IS) for bacterial RNA, which facilitates relative comparison of all modifications. While conventional SIL-IS approaches require the chemical synthesis of single mod…

Carbon IsotopesTandem Mass SpectrometryEscherichia coli500 Natural sciences and mathematicsMethods OnlineRNANucleosides500 NaturwissenschaftenReference Standards13PseudouridineChromatography LiquidNucleic Acids Research
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Expression in Escherichia coli of Native and Chimeric Phenolic Acid Decarboxylases with Modified Enzymatic Activities and Method for Screening Recomb…

2001

ABSTRACT Four bacterial phenolic acid decarboxylases (PAD) from Lactobacillus plantarum , Pediococcus pentosaceus , Bacillus subtilis , and Bacillus pumilus were expressed in Escherichia coli , and their activities on p -coumaric, ferulic, and caffeic acids were compared. Although these four enzymes displayed 61% amino acid sequence identity, they exhibit different activities for ferulic and caffeic acid metabolism. To elucidate the domain(s) that determines these differences, chimeric PAD proteins were constructed and expressed in E. coli by exchanging their individual carboxy-terminal portions. Analysis of the chimeric enzyme activities suggests that the C-terminal region may be involved …

Carboxy-lyasesCoumaric AcidsCarboxy-LyasesDecarboxylationRecombinant Fusion ProteinsBacillus subtilismedicine.disease_causeApplied Microbiology and BiotechnologySubstrate Specificitychemistry.chemical_compoundCaffeic AcidsEscherichia coliCaffeic acidmedicineAmino Acid SequenceEnzymology and Protein EngineeringEscherichia colichemistry.chemical_classificationBacteriaEcologybiologyBacillus pumilusSequence Analysis DNAPhenolic acidbiology.organism_classificationCulture MediaEnzymechemistryBiochemistryFood ScienceBiotechnologyApplied and Environmental Microbiology
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Kinetics and Intensity of the Expression of Genes Involved in the Stress Response Tightly Induced by Phenolic Acids in <i>Lactobacillus plantar…

2007

In <i>Lactobacillus plantarum</i>, PadR, the negative transcriptional regulator of <i>padA </i>encoding the phenolic acid decarboxylase, is divergently oriented from <i>padA. </i>Moreover, it forms an operonic structure with <i>usp1,</i> a genewhose products display homology with proteins belonging to the UspA family of universal stress proteins. PadR is inactivated by the addition of <i>p-</i>coumaric, ferulic or caffeic acid to the culture medium. In order to better characterize the stress response of this bacterium to phenolic acids, we report here the kinetics and quantitative expression by qRT-PCR of the 3 genes from the <i…

Carboxy-lyasesPhysiologymedicine.disease_causeApplied Microbiology and BiotechnologyBiochemistryMicrobiology03 medical and health scienceschemistry.chemical_compoundHeat shock proteinGene expressionmedicineCaffeic acidEscherichia coliGene030304 developmental biology0303 health sciencesbiology030306 microbiologyCell BiologyPhenolic acidbiology.organism_classificationMolecular biologychemistryBiochemistryLactobacillus plantarumBiotechnologyMicrobial Physiology
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Study on carvacrol and cinnamaldehyde polymeric films: mechanical properties, release kinetics and antibacterial and antibiofilm activities.

2012

Polyethylene-co-vinylacetate (EVA) films with different concentrations (3.5 wt% and 7 wt%) of essential oil constituents, carvacrol or cinnamaldehyde, were prepared and characterized by mechanical, antibacterial and antibiofilm properties. The incorporation of the compounds into copolymer films affected their elastic modulus, tensile stress and elongation at break. Carvacrol and cinnamaldehyde act as plasticizers which reduce the intermolecular forces of polymer chains, thus improving the flexibility and extensibility of the film. The analysis of the surface characteristics demonstrated that essential oil constituents lowered the contact angle values without causing any remarkable variation…

Carvacrol Cinnamaldehyde Polymeric film Mechanical properties Release kinetic BiofilmStaphylococcus aureusPolymersMechanical propertiesBacterial growthEscherichia coli O157Applied Microbiology and BiotechnologyCinnamaldehydelaw.inventionContact anglechemistry.chemical_compoundlawCarvacrolOrganic chemistryCarvacrolAcroleinEssential oilchemistry.chemical_classificationBiofilmBiofilmPlasticizerFood PackagingGeneral MedicinePolymerListeria monocytogenesAnti-Bacterial AgentsRelease kineticKineticsPolymeric filmchemistryBiofilmsMonoterpenesCymenesCarvacrol; Cinnamaldehyde; Polymeric film; Mechanical properties; Release kinetic; BiofilmCinnamaldehydeBiotechnologyNuclear chemistryApplied microbiology and biotechnology
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In vitro efficacy of a Hydrophilic Central Venous Catheter Loaded with Silver to Prevent Microbial Colonization

1998

A method was developed to load the surface of a central venous catheter with silver to prevent bacterial colonization. Silver confers a broad antimicrobial activity with a relatively low risk of resistance. Catheters were incubated with a silver nitrate solution in different concentrations. The solvent, incubation temperature and incubation period were varied to examine the influence on the catheter loading. With increasing incubation temperature, time and concentration of silver nitrate, higher rates of silver elution were observed by atomic absorption spectroscopy. Furthermore, by using ethanol-water as a solvent instead of pure water, the amount of silver bound to the catheter surface wa…

Catheterization Central VenousStaphylococcus aureusMicrococcaceaemedicine.medical_treatmentImmunologyMicrobial Sensitivity TestsBacterial AdhesionIncubation periodMicrobiologychemistry.chemical_compoundEscherichia coliStaphylococcus epidermidismedicineCandida albicansChromatographybiologyAntimicrobialbiology.organism_classificationSolventSilver nitrateCatheterchemistryPseudomonas aeruginosaAnti-Infective Agents LocalSilver NitrateCentral venous catheterZentralblatt für Bakteriologie
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Resorcinarene bis-crown silver complexes and their application as antibacterial Langmuir-Blodgett films

2012

Silver complexes of a cation binding supramolecular host, resorcinarene bis-crown (CNBC5) with propyl, nonyl, decyl and undecyl alkyl chains were investigated by NMR titration, picrate extraction and single crystal X-ray diffraction. Binding studies showed that both 1 : 1 and 1 : 2 (host-Ag(+)) complexes are present in solution with only a slight effect of the lower rim alkyl chain length on the binding constants (log K 4.0-4.2 for 1 : 2 complexes). Solid state complexes of the resorcinarene bis-crowns bearing either C(3) or C(11) chains were obtained. Single crystal X-ray analyses showed that both derivatives bind silver ions by metal-arene and Ag···O coordination from the crown ether brid…

Cation bindingSilverPhenylalaninePicrateInorganic chemistrySupramolecular chemistryCrystallography X-RayBiochemistryLangmuir–Blodgett filmchemistry.chemical_compoundCoordination ComplexesPolymer chemistryAmphiphileEscherichia coliPhysical and Theoretical Chemistryta116Escherichia coli InfectionsAlkylCrown etherchemistry.chemical_classificationMolecular StructureOrganic ChemistryResorcinareneAnti-Bacterial AgentschemistryCalixarenesOrganic & Biomolecular Chemistry
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Mammalian intestinal alkaline phosphatase acts as highly active exopolyphosphatase.

2001

Recent results revealed that inorganic polyphosphates (polyP), being energy-rich linear polymers of orthophosphate residues known from bacteria and yeast, also exist in higher eukaryotes. However, the enzymatic basis of their metabolism especially in mammalian cells is still uncertain. Here we demonstrate for the first time that alkaline phosphatase from calf intestine (CIAP) is able to cleave polyP molecules up to a chain length of about 800. The enzyme acts as an exopolyphosphatase degrading polyP in a processive manner. The pH optimum is in the alkaline range. Divalent cations are not required for catalytic activity but inhibit the degradation of polyP. The rate of hydrolysis of short-ch…

Cations DivalentBiophysicsBiologymedicine.disease_causeBiochemistryDivalentSubstrate SpecificityNitrophenolschemistry.chemical_compoundOrganophosphorus CompoundsStructural BiologyNickelPolyphosphatesmedicineAnimalsMagnesiumneoplasmsMolecular BiologyEscherichia coliEdetic AcidExopolyphosphatasechemistry.chemical_classificationPolyphosphateSubstrate (chemistry)MetabolismCobaltHydrogen-Ion ConcentrationAlkaline PhosphataseMolecular biologydigestive system diseasesAcid Anhydride HydrolasesIntestinesKineticsEnzymechemistryBiochemistryAlkaline phosphataseCattleBiochimica et biophysica acta
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High level of intrinsic phenotypic antimicrobial resistance in enterobacteria from terrestrial wildlife in Gabonese national parks.

2021

Data on the prevalence of antibiotic resistance in Enterobacteriaceae in African wildlife are still relatively limited. The aim of this study was to estimate the prevalence of phenotypic intrinsic and acquired antimicrobial resistance of enterobacteria from several species of terrestrial wild mammals in national parks of Gabon. Colony culture and isolation were done using MacConkey agar. Isolates were identified using the VITEK 2 and MALDI-TOF methods. Antibiotic susceptibility was analysed and interpreted according to the European Committee on Antimicrobial Susceptibility Testing guidelines. The preliminary test for ESBL-producing Enterobacteriaceae was performed by replicating enterobacte…

CefotaximeKlebsiella pneumoniaeParks RecreationalSocial SciencesWildlifePathology and Laboratory MedicineKlebsiella Pneumoniaechemistry.chemical_compoundFecesKlebsiellaMedicine and Health SciencesPrevalencePsychologyMammalsMultidisciplinarybiologyAnimal BehaviorQEnterobacteriaceae InfectionsREukaryotaCitrobacter freundiiBacterial PathogensAnti-Bacterial AgentsPhenotypeMedical MicrobiologyAnimal SocialityVertebratesApesMedicinePathogensMandrillusMacConkey agarKlebsiella Oxytocamedicine.drugResearch ArticlePrimatesGorillasScienceAnimals WildMicrobial Sensitivity TestsProteus Mirabilisbeta-LactamsKlebsiella variicolaMicrobiologybeta-Lactam Resistancebeta-LactamasesMicrobiologyEnterobacteriaceaeMicrobial ControlEnterobacter cloacaemedicineEscherichia coliAnimalsGabonMicrobial PathogensPharmacologyBehaviorGorilla gorillaBacteriaOrganismsBiology and Life SciencesKlebsiella oxytocabiology.organism_classificationProteus mirabilischemistryAntibiotic ResistanceAmniotesbacteriaAntimicrobial ResistanceEnterobacter cloacaeZoologyPLoS ONE
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Amperometric detection of extended-spectrum β-lactamase activity : application to the characterization of resistant E.coli strains

2015

EA MERS CT3; International audience; The amperometric detection of extended-spectrum β-lactamase (ESBL) with carbon screen-printed sensors was investigated in the presence of the Nitrocefin, a commercially-available β-lactamase chromogenic cephalosporin substrate. Using an ESBL isolated from a clinical sample, it was shown for the first time that the intensity of a specific anodic pic current (EP = [similar]+0.3 V vs. Ag/AgCl) resulting from the catalytic hydrolysis of the β-lactam ring was proportional to the amount of ESBL. The proof-of-principle of a novel susceptibility assay for the rapid and accurate identification of ESBL- producing bacteria was then demonstrated. The detection schem…

Cefotaximemedicine.drug_classélectrochimie[SDV]Life Sciences [q-bio]CephalosporinAnalytical chemistryBiochemistrybeta-LactamasesAnalytical Chemistry03 medical and health sciencesClavulanic acidDrug Resistance BacterialElectrochemistrymedicineEscherichia colipolycyclic compoundsEnvironmental ChemistryNitrocefin[SDV.BV]Life Sciences [q-bio]/Vegetal Biologyélectrode sérigraphiéeSpectroscopybêta-lactamase à spectre étendu (BLSE)Enzyme Assays030304 developmental biologyDetection limit0303 health sciencesChromatographybiology030306 microbiologyChemistryChromogenicbactériologienitrocéfineHydrolysisbiochemical phenomena metabolism and nutritionbiology.organism_classificationbacterial infections and mycosesAmperometryAnti-Bacterial AgentsCephalosporinscultureampérométrie[SDE]Environmental SciencesBacteriamedicine.drugbactériologie;culture;Escherichia coli;bêta-lactamase à spectre étendu (BLSE);électrochimie;ampérométrie;électrode sérigraphiée;nitrocéfine
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Cryopreservation of Escherichia coli K12TG1: Protection from the damaging effects of supercooling by freezing

2015

Injuries in living cells caused by water freezing during a freeze-thaw process have been extensively reported. In particular, intracellular water freezing has long been incriminated in cell death caused by a high cooling rate, but this supposition could not always be demonstrated. This work aims to discriminate the role of water freezing, dehydration and cold-induced injuries in cellular damage occuring during cryopreservation. For this purpose, Escherichia coli K12TG1 suspensions were maintained in a supercooled or frozen state at -20°C for times ranging from 10 min to 5 h. The supercooled state was maintained for a long period at -20°C by applying a non-injurious isostatic pressure (P<40 …

Cell Membrane PermeabilityCell SurvivalGeneral Biochemistry Genetics and Molecular BiologyCryopreservationchemistry.chemical_compoundCryoprotective AgentsFreezingmedicineOsmotic pressureDehydrationPropidium iodideSupercoolingFluorescent DyesCryopreservationChromatographyCell DeathDehydrationEscherichia coli K12ChemistryCell MembraneIceGeneral MedicineThiobarbituratesmedicine.diseaseMembraneBiophysicsGeneral Agricultural and Biological SciencesLaurdanIntracellularPropidiumCryobiology
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