Search results for "Escher"

showing 10 items of 728 documents

Primary structure and opsonic activity of an F-lectin from serum of the gilt head breamSparus aurata(Pisces, Sparidae)

2012

Abstract The recently described fucose-binding agglutinin from the European eel revealed a novel lectin fold (the ‘F-type’ fold) that is shared with other carbohydrate-binding proteins and proteins from prokaryotes to vertebrates clustered under the newly established F-type lectin (FTL) family. We previously reported the purification and biochemical characterization of a fucose-binding protein (FBP) isolated from serum of the gilt head bream (Sparus aurata, SauFBP). In the present article, the complete coding sequence of SauFBP revealed that it is a member of the FTL family, consisting of two tandem carbohydrate recognition domains (CRD) that display the F-type sequence motif. In vitro opso…

Protein primary structureLectinBiologymedicine.disease_causeMolecular biologyFucoseAntibody opsonizationchemistry.chemical_compoundAgglutininchemistryImmunologymedicinebiology.proteinAnimal Science and ZoologySequence motifOpsoninEscherichia coliItalian Journal of Zoology
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Recombinant functional multidomain hemoglobin from the gastropod Biomphalaria glabrata

2011

The extracellular hemoglobin multimer of the planorbid snail Biomphalaria glabrata, intermediate host of the human parasite Schistosoma mansoni, is presumed to be a 1.44 MDa complex of six 240 kDa polypeptide subunits, arranged as three disulfide-bridged dimers. The complete amino acid sequence of two subunit types (BgHb1 and BgHb2), and the partial sequence of a third type (BgHb3) are known. Each subunit encompasses 13 paralogus heme domains, and N-terminally a smaller plug domain responsible for subunit dimerization. We report here the recombinant expression of different functional fragments of BgHb2 in Escherichia coli, and of the complete functional subunits BgHb1 and BgHb2 in insect ce…

Protein subunitClinical BiochemistryCooperativitymedicine.disease_causeBiochemistrylaw.inventionHemoglobinschemistry.chemical_compoundlawGeneticsmedicineAnimalsHumansBiomphalaria glabrataProtein Structure QuaternaryMolecular BiologyEscherichia coliPeptide sequenceHemeBiomphalariabiologySchistosoma mansoniCell Biologybiology.organism_classificationRecombinant ProteinsOxygenProtein SubunitsBiochemistrychemistryRecombinant DNAOxygen bindingIUBMB Life
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Proteome-Wide Characterization of the RNA-Binding Protein RALY-Interactome Using the in Vivo-Biotinylation-Pulldown-Quant (iBioPQ) Approach

2013

RALY is a member of the heterogeneous nuclear ribonucleoproteins, a family of RNA-binding proteins generally involved in many processes of mRNA metabolism. No quantitative proteomic analysis of RALY-containing ribonucleoparticles (RNPs) has been performed so far, and the biological role of RALY remains elusive. Here, we present a workflow for the characterization of RALY's interaction partners, termed iBioPQ, that involves in vivo biotinylation of biotin acceptor peptide (BAP)-fused protein in the presence of the prokaryotic biotin holoenzyme synthetase of BirA so that it can be purified using streptavidin-coated magnetic beads, circumventing the need for specific antibodies and providing e…

ProteomeRecombinant Fusion ProteinsMolecular Sequence DataBiotinRNA-binding proteinBiologyHeterogeneous ribonucleoprotein particleProteomicsPoly(A)-Binding Protein IBiochemistryInteractomeELAV-Like Protein 103 medical and health scienceschemistry.chemical_compound0302 clinical medicineNuclear Matrix-Associated ProteinsBiotinProtein Interaction MappingHumansCarbon-Nitrogen LigasesAmino Acid SequenceProtein Interaction MapsPeptide sequence030304 developmental biology0303 health sciencesEscherichia coli ProteinsHeterogeneous-Nuclear Ribonucleoprotein Group CRNA-Binding ProteinsGeneral ChemistryRepressor ProteinsHEK293 CellsELAV ProteinsGene Expression RegulationBiochemistrychemistryProtein Biosynthesis030220 oncology & carcinogenesisBiotinylationProteomeBiological AssayStreptavidinHeLa CellsProtein BindingJournal of Proteome Research
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Fumarate dependent protein composition under aerobic and anaerobic growth conditions in Escherichia coli

2020

Abstract In the absence of sugars, C4-dicarboxylates (C4DC) like fumarate represent important substrates for growth of Escherichia coli. Aerobically, C4DCs are oxidized to CO2 whereas anaerobically, C4DCs are used for fumarate respiration. In order to determine the impact of fumarate under aerobic and anaerobic conditions, proteomes of E. coli W3110 grown aerobically or anaerobically with fumarate and/or the non-C4DC substrate glycerol were comparatively profiled by nanoLC-MS/MS. Membrane enrichment allowed sensitive detection of membrane proteins. A total of 1657 proteins of which 646 and 374 were assigned to the cytosol or membrane, respectively, were covered. Presence of fumarate trigger…

Proteomics0301 basic medicineBiophysicsCatabolite repressionmedicine.disease_causeBiochemistryCarbon utilization03 medical and health sciencesFumaratesTandem Mass SpectrometryEscherichia colimedicineDicarboxylic AcidsAnaerobiosisEscherichia coli030102 biochemistry & molecular biologybiologyChemistryEscherichia coli ProteinsGene Expression Regulation BacterialAerobiosisDNA-Binding ProteinsCitric acid cycle030104 developmental biologyRegulonMembrane proteinBiochemistrycAMP receptor proteinbiology.proteinProtein KinasesAnaerobic exerciseTranscription FactorsJournal of Proteomics
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Proteomics of Galápagos Marine Iguanas Links Function of Femoral Gland Proteins to the Immune System

2020

Femoral glands secrete a wax-like substance on the inner side of lizard hind legs, which is thought to function as a mode of chemical communication. Though the minor volatile fraction is well studied, the major protein fraction remains enigmatic. Here, we use proteomics to analyze proteins in femoral gland secretions of the Galápagos marine iguana. Although we found no evidence for proteins and peptides involved in chemical communication, we found several immune-regulatory proteins which also demonstrate anti-microbial functions. Accordingly, we show that femoral gland proteins and peptides function as a barrier against microbial infection and may prevent the rapid degradation of volatile s…

ProteomicsProteomeProteomicsBiochemistryAnalytical ChemistryAnti-Infective AgentsTandem Mass Spectrometrydatabase designprotease inhibitor protein identificationLungSkin0303 health sciencesMuscles030302 biochemistry & molecular biologyBrainHigh-Throughput Nucleotide SequencingHeartBlood proteinsanimal modelsmarine iguanaBiochemistryOrgan SpecificityProteomeEcuadorBacillus subtilisPulmonary Surfactant-Associated ProteinsGalectinsAntileukoproteinaseBiologyprotease inhibitor03 medical and health sciencesproteomicsImmune systemfemoral glandsevolutionEndopeptidasesEscherichia coliAnimalsHumanstissuesMolecular Biology030304 developmental biologyGalectinInnate immune systemChemotactic FactorsResearchMyocardiumImmunity Innateimmune systemIguanasMuramidaseApoproteinsTranscriptomeFunction (biology)Molecular & Cellular Proteomics
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Strategies for the production of difficult-to-express full-length eukaryotic proteins using microbial cell factories : production of human alpha-gala…

2015

This work was supported by ERANET-IB08-007 project from the European Union and its linked national project EUI2008- 03610 to AV. We also appreciate the support from EME2007-08 to NFM from Universitat Autonoma de Barcelona, from Antartide 2010 to MLT and EP, from MIUR Azioni Integrate Italia-Spagna 2010 Prot. IT10LECLM9 to MLT, from MINECO (IT2009-0021) to AV and LT, from AGAUR (2009SGR-108) to AV. AV is also supported by The Biomedical Research Networking Center in Bioengineering, Biomaterials and Nanomedicine (CIBER-BBN, Spain), an initiative funded by the VI National R&D&i Plan 2008-2011, Iniciativa Ingenio 2010, Consolider Program, CIBER Actions and financed by the Instituto de Salud Car…

PseudoalteromonaRecombinant proteinExpression systemsFabry's diseaseHuman alpha-galactosidase AContext (language use)Computational biologyBiologymedicine.disease_causeApplied Microbiology and BiotechnologyMicrobiologyPseudoalteromonas haloplanktisGene expressionEnzyme StabilitymedicineProtein biosynthesisEscherichia coliHumansEscherichia coliGenePseudoalteromonas haloplanktis TAC125Expression systemGeneral Medicinebiology.organism_classificationRecombinant ProteinsPseudoalteromonasMembrane proteinFabry’s diseaseMetabolic Engineeringalpha-GalactosidaseProtein foldingBiotechnologyHuman
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External iliac artery pseudoaneurysm complicating renal transplantation

2009

Objective: To assess the etiology, management and outcome of iliac pseudoaneurysms following renal transplantation. Methods: Eleven patients who underwent repair between 1982 and 2007 were identified. Five (Group 1) presented pseudoaneurysm at the anastomosis of the donor renal and native iliac arteries, and six (Group 2) presented iliac pseudoaneurysm following transplant nephrectomy. Intraoperative cultures and immunohistochemical examinations were obtained from all surgical cases to determine the existence of a relationship between infection or transplant rejection and pseudoaneurysm formation. Results: Endovascular repair (EVR) was used to treat three patients, while eight patients unde…

Pulmonary and Respiratory MedicineAdultMaleReoperationmedicine.medical_specialtyTime Factorspseudoaneurysm.medicine.medical_treatmentExternal iliac arteryendovascular repairAnastomosisSettore MED/22 - Chirurgia VascolareIliac ArteryNephrectomyPseudoaneurysmRenal Arterymedicine.arteryiliac artery pseudoaneurysmCandida albicansmedicineEscherichia coliHumanscardiovascular diseasesRenal arteryAgedRetrospective Studiesbusiness.industryAnastomosis SurgicalExternal iliac arteryrenal transplantationMiddle Agedmedicine.diseaseKidney TransplantationNephrectomyopen repairTransplant rejectionTransplantationTreatment Outcomecardiovascular systemEtiologySurgeryFemaleRadiologyCardiology and Cardiovascular MedicinebusinessTomography X-Ray ComputedVascular Surgical ProceduresAneurysm FalseMagnetic Resonance Angiography
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Global functorial hypergestures over general skeleta for musical performance

2016

Musical performance theory using Lagrangian formalism, inspired by physical string theory, has been described in previous research. That approach was restricted to zero-addressed hypergestures of local character, and also to digraph skeleta of simple arrow type. In this article, we extend the theory to hypergestures that are defined functorially over general topological categories as addresses, are global, and are also defined for general skeleta. We also prove several versions of the important Escher Theorem for this general setup. This extension is highly motivated by theoretical and practical musical performance requirements of which we give concrete examples.

Pure mathematicsComputer scienceMusicalcomposition; functoriality; global hypergestures; musical performance; string theory; world-sheetsPerformance theoryString theory050105 experimental psychologyEscher060404 musicsymbols.namesakestring theory0501 psychology and cognitive sciencescomputer.programming_languageSettore INF/01 - InformaticaApplied Mathematics05 social sciencesglobal hypergesturesDigraph06 humanities and the artsmusical performanceworld-sheetsAlgebraSettore MAT/02 - AlgebraComputational MathematicsFormalism (philosophy of mathematics)functorialityModeling and SimulationArrowsymbolscomputer0604 artsMusicLagrangianCompositionJournal of Mathematics and Music
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Pdl1 Is a Putative Lipase that Enhances Photorhabdus Toxin Complex Secretion

2012

The Toxin Complex (TC) is a large multi-subunit toxin first characterized in the insect pathogens Photorhabdus and Xenorhabdus, but now seen in a range of pathogens, including those of humans. These complexes comprise three protein subunits, A, B and C which in the Xenorhabdus toxin are found in a 4∶1∶1 stoichiometry. Some TCs have been demonstrated to exhibit oral toxicity to insects and have the potential to be developed as a pest control technology. The lack of recognisable signal sequences in the three large component proteins hinders an understanding of their mode of secretion. Nevertheless, we have shown the Photorhabdus luminescens (Pl) Tcd complex has been shown to associate with th…

QH301-705.5Protein subunitImmunologyBacterial ToxinsMicrobiologiaXenorhabdusPathogenesisBiologymedicine.disease_causeMicrobiologyVirulence factorXenorhabdusMicrobiology03 medical and health sciencesBacterial ProteinsVirologyPhotorhabdus luminescensManducaGeneticsmedicineEscherichia coliGram NegativeAnimalsSecretionBiology (General)Molecular BiologyEscherichia coliBiologyMicrobial PathogensBacterial Secretion Systems030304 developmental biology0303 health sciences030306 microbiologyToxinMembrane ProteinsLipaseRC581-607biology.organism_classificationBacterial PathogensHost-Pathogen InteractionLarvaBacteris patògensParasitologyImmunologic diseases. AllergyPhotorhabdusProteïnesPhotorhabdusResearch ArticlePLoS Pathogens
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Queilitis granulomatosa de Miescher: presentación de cinco casos

2004

La queilitis granulomatosa de Miescher (QG), consiste en la aparición de edema labial recurrente en uno o ambos labios, el cual puede llegar a ser persistente. Ha sido considerada tradicionalmente, como una forma monosintomática del síndrome de Melkersson Rosenthal, descrito como la asociación de edema labial y/o facial recurrente, parálisis facial recidivante y lengua fisurada. El objetivo de este trabajo es presentar una serie de 5 casos diagnosticados clínica e histopatológicamente de QG, que acudieron a la consulta de la Unidad Docente de Medicina Bucal de la Universidad de Murcia. Se realizó un estudio completo de estos pacientes, valoramos la edad y el sexo, antecedentes familiares, l…

Queilitis granulomatosasíndrome de Melkersson-RosenthalUNESCO::CIENCIAS MÉDICASOdontología:CIENCIAS MÉDICAS [UNESCO]Ciencias de la saludqueilitis de Miescher
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