Search results for "Escher"

showing 10 items of 728 documents

L‐Aspartate as a high‐quality nitrogen source in Escherichia coli : Regulation of L‐aspartase by the nitrogen regulatory system and interaction of L‐…

2020

Escherichia coli uses the C4-dicarboxylate transporter DcuA for L-aspartate/fumarate antiport, which results in the exploitation of L-aspartate for fumarate respiration under anaerobic conditions and for nitrogen assimilation under aerobic and anaerobic conditions. L-Aspartate represents a high-quality nitrogen source for assimilation. Nitrogen assimilation from L-aspartate required DcuA, and aspartase AspA to release ammonia. Ammonia is able to provide by established pathways the complete set of intracellular precursors (ammonia, L-aspartate, L-glutamate, and L-glutamine) for synthesizing amino acids, nucleotides, and amino sugars. AspA was regulated by a central regulator of nitrogen meta…

endocrine system diseasesNitrogenGlutaminePII Nitrogen Regulatory ProteinsNitrogen assimilationDeaminationGlutamic AcidBiologymedicine.disease_causeAspartate Ammonia-LyaseMicrobiology03 medical and health sciencesBacterial ProteinsAmmoniaEscherichia colimedicineProtein Interaction Domains and MotifsNucleotideMolecular BiologyEscherichia coliNitrogen cycle030304 developmental biologyDicarboxylic Acid Transporterschemistry.chemical_classificationAspartic Acid0303 health sciences030306 microbiologyEscherichia coli ProteinsAssimilation (biology)Gene Expression Regulation BacterialAmino acidEnzymechemistryBiochemistryMutationKetoglutaric AcidsMetabolic Networks and PathwaysMolecular Microbiology
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Expression, purification, crystallization and preliminary X-ray analysis of perakine reductase, a new member of the aldo-keto reductase enzyme superf…

2006

Perakine reductase (PR) is a novel member of the aldo-keto reductase enzyme superfamily from higher plants. PR from the plant Rauvolfia serpentina is involved in the biosynthesis of monoterpenoid indole alkaloids by performing NADPH-dependent reduction of perakine, yielding raucaffrinoline. However, PR can also reduce cinnamic aldehyde and some of its derivatives. After heterologous expression of a triple mutant of PR in Escherichia coli, crystals of the purified and methylated enzyme were obtained by the hanging-drop vapour-diffusion technique at 293 K with 100 mM sodium citrate pH 5.6 and 27% PEG 4000 as precipitant. Crystals belong to space group C222(1) and diffract to 2.0 A, with unit-…

endocrine systemStereochemistryAldo-Keto ReductasesBiophysicsAlcohol oxidoreductaseReductaseCrystallography X-Raymedicine.disease_causeBiochemistryRauwolfiachemistry.chemical_compoundBiosynthesisAldehyde ReductaseStructural BiologyRauvolfia serpentinaGeneticsmedicineEscherichia colichemistry.chemical_classificationAldo-keto reductasebiologyCondensed Matter Physicsbiology.organism_classificationAlcohol OxidoreductasesEnzymeBiochemistrychemistryCrystallization CommunicationsHeterologous expressionCrystallizationActa Crystallographica Section F Structural Biology and Crystallization Communications
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Control of Growth and Persistence of Listeria monocytogenes and β-Lactam-Resistant Escherichia coli by Thymol in Food Processing Settings

2020

The main objective of this study was to evaluate the efficacy of thymol in controlling environmental contamination in food processing facilities. The effect of thymol was tested as an agent to prevent planktonic and bacterial biofilm growth of twenty-five Listeria monocytogenes isolates from a variety of foods and five Escherichia coli isolates from a farm. The E. coli isolates were positive for extended spectrum &beta

esblSettore CHIM/10 - Chimica Degli Alimenti<i>escherichia coli</i>Pharmaceutical ScienceSettore BIO/19 - Microbiologia Generalemedicine.disease_causebiofilmAnalytical ChemistryPersistence (computer science)lcsh:QD241-44103 medical and health scienceschemistry.chemical_compoundMinimum inhibitory concentrationlcsh:Organic chemistryListeria monocytogenesthymolDrug DiscoveryEscherichia colimedicineFood sciencePhysical and Theoretical ChemistryEscherichia coliThymolListeria monocytogene030304 developmental biology0303 health sciences030306 microbiologyOrganic ChemistryBiofilmContaminationchemistryChemistry (miscellaneous)<i>listeria monocytogenes</i>LactamMolecular MedicineMolecules
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Involvement of an Alkane Hydroxylase System of Gordonia sp. Strain SoCg in Degradation of Solid n-Alkanes▿

2010

ABSTRACT Enzymes involved in oxidation of long-chain n -alkanes are still not well known, especially those in Gram-positive bacteria. This work describes the alkane degradation system of the n -alkane degrader actinobacterium Gordonia sp. strain SoCg, which is able to grow on n -alkanes from dodecane (C 12 ) to hexatriacontane (C 36 ) as the sole C source. SoCg harbors in its chromosome a single alk locus carrying six open reading frames (ORFs), which shows 78 to 79% identity with the alkane hydroxylase (AH)-encoding systems of other alkane-degrading actinobacteria. Quantitative reverse transcription-PCR showed that the genes encoding AlkB (alkane 1-monooxygenase), RubA3 (rubredoxin), RubA4…

food.ingredientMutantMolecular Sequence DataAlkBGene ExpressionStreptomyces coelicolorGordoniaLong-chain n-alkaneGordoniaSettore BIO/19 - Microbiologia Generalemedicine.disease_causeApplied Microbiology and BiotechnologyPolymerase Chain ReactionGas Chromatography-Mass SpectrometryfoodRubredoxinAlkanesSPME/GC-MSmedicineEscherichia coliNADH NADPH OxidoreductasesGordonia BacteriumEscherichia coliBiotransformationSequence DeletionEcologybiologyReverse Transcriptase Polymerase Chain ReactionRubredoxinsStreptomyces coelicolorGordonia BacteriumSequence Analysis DNAbiology.organism_classificationCarbonalkane hydroxylase AlkBBiochemistrybiology.proteinBiodegradationCytochrome P-450 CYP4AFatty AlcoholsBacteriaFood ScienceBiotechnology
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Maternal antibody transmission and breeding densities in the Black-headed Gull Larus ridibundus

2004

1. The offspring of avian species, especially those of colonial breeders, are exposed to a number of pathogens immediately after birth. The chick's immune system is, at that early stage still immature and inefficient. As a consequence, diseases can have a strong impact on chick survival.2. The ability of mothers to transmit passive immunity in terms of antibodies of their own acquired immunity to their chicks is probably an essential pathway to enhance the chick survival. Since the production of antibodies is costly, females are expected to adjust the transmission of passive immunity to the local disease environment.3. We found that in Black-headed Gulls (Larus ridibundus L.) yolk antibody …

food.ingredientOffspringmedicine.medical_treatmentmedia_common.quotation_subjectCOLONIALITYZoologyPassive immunityBiologyPopulation densityfoodTESTOSTERONEYolkHirundomedicineFUSCUSCAROTENOIDSKITTIWAKE RISSA-TRIDACTYLAEcology Evolution Behavior and Systematicsmedia_commonBIRDSHIRUNDOHatchingEcologyMaternal effectbiology.organism_classificationpassive immunityESCHERICHIA-COLIcolonial breedinglaying orderembryonic structuresSURVIVALmaternal effectsSEXReproductionFunctional Ecology
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Genome rearrangement distances and gene order phylogeny in gamma-Proteobacteria.

2005

Genome rearrangements have been studied in 30 gamma-proteobacterial complete genomes by comparing the order of a reduced set of genes on the chromosome. This set included those genes fulfilling several characteristics, the main ones being that an ortholog was present in every genome and that none of them had been acquired by horizontal gene transfer. Genome rearrangement distances were estimated based on either the number of breakpoints or the minimal number of inversions separating two genomes. Breakpoint and inversion distances were highly correlated, indicating that inversions were the main type of rearrangement event in gamma-Proteobacteria. In general, the progressive increase in seque…

food.ingredientTime FactorsGene Transfer HorizontalYersinia pestisLineage (evolution)BlochmanniaBiologyWigglesworthia glossinidiaGenomeEvolution MolecularfoodPhylogeneticsGene OrderGeneticsEscherichia coliMolecular BiologyEcology Evolution Behavior and SystematicsPhylogenyGeneticsGenomePhylogenetic treeModels GeneticModels Theoreticalbiology.organism_classificationBiological EvolutionHorizontal gene transferBuchneraGammaproteobacteriaGenome BacterialMolecular biology and evolution
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Transfer of Immunity from Mother to Offspring Is Mediated via Egg-Yolk Protein Vitellogenin.

2015

Insect immune systems can recognize specific pathogens and prime offspring immunity. High specificity of immune priming can be achieved when insect females transfer immune elicitors into developing oocytes. The molecular mechanism behind this transfer has been a mystery. Here, we establish that the egg-yolk protein vitellogenin is the carrier of immune elicitors. Using the honey bee, Apis mellifera, model system, we demonstrate with microscopy and western blotting that vitellogenin binds to bacteria, both Paenibacillus larvae – the gram-positive bacterium causing American foulbrood disease – and to Escherichia coli that represents gram-negative bacteria. Next, we verify that vitellogenin bi…

honey beestrans-generational immunityEgg proteinmedicine.disease_causebakteeritchemistry.chemical_compoundVitellogeninsbacterial pathogensimmuniteettibacterialcsh:QH301-705.5biologyfood and beveragesBees3. Good healthCell biologyFemaleVitellogeninsResearch Articlelcsh:Immunologic diseases. Allergyfood.ingredientanimal structuresImmunologyBlotting WesternMicrobiologyVitellogeninfoodImmune systemImmunityVirologyYolkGeneticsmedicineAnimalsMolecular BiologyEscherichia coliOvumfungiEgg Proteinsta1182Surface Plasmon Resonanceimmunitylcsh:Biology (General)chemistryImmunologybiology.proteinta1181bacteriaParasitologyPeptidoglycanlcsh:RC581-607vitellogeninPLoS pathogens
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Properties and significance of apoFNR as a second form of air-inactivated [4Fe-4S]·FNR of Escherichia coli

2005

The active form of the oxygen sensor fumarate nitrate reductase regulator (FNR) of Escherichia coli contains a [4Fe-4S] cluster which is converted to a [2Fe-2S] cluster after reaction with air, resulting in inactivation of FNR. Reaction of reconstituted [4Fe-4S].FNR with air resulted within 5 min in conversion to apoFNR. The rate was comparable to the rate known for [4Fe-4S].FNR/[2Fe-2S].FNR cluster conversion, suggesting that apoFNR is a product of [2Fe-2S].FNR decomposition and a final form of air-inactivated FNR in vitro. Formation of apoFNR and the redox state of the cysteinyl residues were determined in vitro by alkylation. FNR contains five cysteinyl residues, four of which (Cys20, Cy…

inorganic chemicalsChemistryStereochemistrymacromolecular substancesCell BiologyAlkylationmedicine.disease_causePhotochemistryNitrate reductaseenvironment and public healthBiochemistryDecompositionRedoxIn vitroenzymes and coenzymes (carbohydrates)medicineDisulfide ReductionbacteriaMolecular BiologyEscherichia coliCysteineFEBS Journal
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The fnr Gene of Bacillus licheniformis and the Cysteine Ligands of the C-Terminal FeS Cluster

1998

Many of the O2-responsive gene regulators of bacteria are members of the fumarate nitrate reductase-cyclic AMP receptor protein family of transcriptional regulators (12, 13, 15, 17) with predicted structures similar to those of the cyclic AMP receptor protein (11). The Fnr (stands for fumarate nitrate reductase regulator) protein from Escherichia coli (FnrEc) controls the expression of a variety of genes, mainly of anaerobic respiration and metabolism (5, 13). It contains a N-terminal cluster of three essential cysteine residues which are supposed to bind together with Cys122 a [4Fe 4S]2+ cluster which is required for O2 sensing (4, 7, 8, 10, 16). A wide variety of gram-negative bacteria co…

inorganic chemicalsIron-Sulfur ProteinsMolecular Sequence DataRestriction MappingMutantBacillusGenetics and Molecular BiologySequence alignmentmacromolecular substancesBacillus subtilisLigandsNitrate reductaseenvironment and public healthMicrobiologyBacterial ProteinsAmino Acid SequenceCysteineBacillus licheniformisMolecular BiologyPeptide sequenceBacillus megateriumSequence Homology Amino AcidbiologyEscherichia coli ProteinsGene Expression Regulation Bacterialbiology.organism_classificationenzymes and coenzymes (carbohydrates)KineticsBiochemistryBacillus megateriumbacteriaSequence AlignmentBacillus subtilisTranscription FactorsCysteineJournal of Bacteriology
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Role of glutathione in the formation of the active form of the oxygen sensor FNR ([4Fe-4S]·FNR) and in the control of FNR function

2000

The oxygen sensor regulator FNR (fumarate nitrate reductase regulator) of Escherichia coli is known to be inactivated by O2 as the result of conversion of a [4Fe-4S] cluster of the protein into a [2Fe-2S] cluster. Further incubation with O2 causes loss of the [2Fe-2S] cluster and production of apoFNR. The reactions involved in cluster assembly and reductive activation of apoFNR isolated under anaerobic or aerobic conditions were studied in vivo and in vitro. In a gshA mutant of E. coli that was completely devoid of glutathione, the O2 tension for the regulatory switch for FNR-dependent gene regulation was decreased by a factor of 4–5 compared with the wild-type, suggesting a role for glutat…

inorganic chemicalsReducing agentCysteine desulfuraseMutantRegulatormacromolecular substancesGlutathioneBiologymedicine.disease_causeNitrate reductaseenvironment and public healthBiochemistryenzymes and coenzymes (carbohydrates)chemistry.chemical_compoundchemistryBiochemistrymedicinebacteriaEscherichia coliCysteineEuropean Journal of Biochemistry
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