Search results for "Evolutionary Processes"

showing 10 items of 36 documents

PACo: a novel procrustes application to cophylogenetic analysis.

2013

We present Procrustean Approach to Cophylogeny (PACo), a novel statistical tool to test for congruence between phylogenetic trees, or between phylogenetic distance matrices of associated taxa. Unlike previous tests, PACo evaluates the dependence of one phylogeny upon the other. This makes it especially appropriate to test the classical coevolutionary model that assumes that parasites that spend part of their life in or on their hosts track the phylogeny of their hosts. The new method does not require fully resolved phylogenies and allows for multiple host-parasite associations. PACo produces a Procrustes superimposition plot enabling a graphical assessment of the fit of the parasite phyloge…

Evolutionary ProcessesParàsitsZoologylcsh:MedicineBiologia Models matemàticsAnimal PhylogeneticsBiostatisticsBiologyForms of EvolutionStatistical powerPlot (graphics)Host-Parasite InteractionsEvolution MolecularCongruence (geometry)StatisticsAnimalsEvolutionary SystematicsComputer SimulationParasiteslcsh:ScienceBiologyPhylogenyStatisticEvolutionary BiologyMultidisciplinaryPhylogenetic treeStatisticslcsh:RConfidence intervalPhylogeneticsParasitologylcsh:QZoologyJackknife resamplingMathematicsSoftwareResearch ArticleCoevolutionType I and type II errorsPLoS ONE
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Life History Trade-Offs and Relaxed Selection Can Decrease Bacterial Virulence in Environmental Reservoirs

2012

Pathogen virulence is usually thought to evolve in reciprocal selection with the host. While this might be true for obligate pathogens, the life histories of opportunistic pathogens typically alternate between within-host and outside-host environments during the infection-transmission cycle. As a result, opportunistic pathogens are likely to experience conflicting selection pressures across different environments, and this could affect their virulence through life-history trait correlations. We studied these correlations experimentally by exposing an opportunistic bacterial pathogen Serratia marcescens to its natural protist predator Tetrahymena thermophila for 13 weeks, after which we meas…

Food ChainEvolutionary ProcessesScienceVirulenceParallel EvolutionPathogenesisEnvironmentBiologyForms of EvolutionMicrobiologyDivergent EvolutionTetrahymena thermophilaMicrobial Ecology03 medical and health sciencesNatural Selectionexperimental evolutionSelection GeneticAdaptationBiologyMicrobial PathogensPathogenSerratia marcescensSelection (genetic algorithm)030304 developmental biologyGeneticsEvolutionary Biology0303 health sciencesMultidisciplinaryEcologyObligate030306 microbiologyHost (biology)Mechanism (biology)QRAdaptation PhysiologicalBiological EvolutionBacterial PathogensvirulenceEvolutionary EcologyMicrobial EvolutionBacterial pigmentMedicineta1181AdaptationResearch ArticlePLoS ONE
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Comparative Genomics of Serratia spp.: Two Paths towards Endosymbiotic Life

2012

Symbiosis is a widespread phenomenon in nature, in which insects show a great number of these associations. Buchnera aphidicola, the obligate endosymbiont of aphids, coexists in some species with another intracellular bacterium, Serratia symbiotica. Of particular interest is the case of the cedar aphid Cinara cedri, where B. aphidicola BCc and S. symbiotica SCc need each other to fulfil their symbiotic role with the insect. Moreover, various features seem to indicate that S. symbiotica SCc is closer to an obligate endosymbiont than to other facultative S. symbiotica, such as the one described for the aphid Acirthosyphon pisum (S. symbiotica SAp). This work is based on the comparative genomi…

Genome evolutionEvolutionary ProcessesSerratialcsh:MedicineGenomicsBiologyForms of EvolutionGenomeMicrobiologyEvolution Molecular03 medical and health sciencesBuchneraPhylogeneticsAnimalslcsh:ScienceSymbiosisGenome sizeBiologyGenome EvolutionPhylogeny030304 developmental biologyGeneticsComparative genomics0303 health sciencesEvolutionary BiologyMultidisciplinaryObligate030306 microbiologylcsh:RComputational BiologyGenomicsComparative Genomicsbiology.organism_classificationAphidsMicrobial Evolutionlcsh:QBuchneraGenome BacterialResearch ArticleCoevolutionPLoS ONE
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Evolutionary morphology in shape and size of haptoral anchors in 14 Ligophorus spp. (Monogenea: Dactylogyridae).

2017

The search for phylogenetic signal in morphological traits using geometric morphometrics represents a powerful approach to estimate the relative weights of convergence and shared evolutionary history in shaping organismal form. We assessed phylogenetic signal in the form of ventral and dorsal haptoral anchors of 14 species of Ligophorus occurring on grey mullets (Osteichthyes: Mugilidae) from the Mediterranean, the Black Sea and the Sea of Azov. The phylogenetic relationships among these species were mapped onto the morphospaces of shape and size of dorsal and ventral anchors and two different tests were applied to establish whether the spatial positions in the morphospace were dictated by …

Gills0106 biological sciences0301 basic medicinelcsh:MedicineMorphology (biology)Animal Phylogenetics01 natural sciencesEcologia marinaMathematical and Statistical Techniqueslcsh:SciencePhylogenyData ManagementPrincipal Component AnalysisMultidisciplinarybiologyPhylogenetic treePhylogenetic AnalysisPeixosBiological EvolutionSmegmamorphaPhylogeneticsPhenotypePhysical SciencesStatistics (Mathematics)MonogeneaResearch ArticleComputer and Information SciencesEvolutionary ProcessesParàsitsImaging TechniquesZoologyResearch and Analysis Methods010603 evolutionary biologyHost SpecificityHost-Parasite Interactions03 medical and health sciencesSpecies SpecificityPhylogeneticsAnimalsEvolutionary SystematicsParasite EvolutionStatistical MethodsTaxonomyMorphometricsEvolutionary BiologyEvolutionary Developmental BiologyMorphometrylcsh:RBiology and Life Sciencesbiology.organism_classificationDactylogyridae030104 developmental biologyPlatyhelminthsMultivariate AnalysisEvolutionary developmental biologyParasitologylcsh:QAllometryZoologyMathematicsDevelopmental BiologyPLoS ONE
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Immune-mediated change in the expression of a sexual trait predicts offspring survival in the wild.

2011

9 pages; International audience; BACKGROUND: The "good genes" theory of sexual selection postulates that females choose mates that will improve their offspring's fitness through the inheritance of paternal genes. In spite of the attention that this hypothesis has given rise to, the empirical evidence remains sparse, mostly because of the difficulties of controlling for the many environmental factors that may covary with both the paternal phenotype and offspring fitness. Here, we tested the hypothesis that offspring sired by males of a preferred phenotype should have better survival in an endangered bird, the houbara bustard (Chlamydotis undulata undulata). METHODOLOGY/PRINCIPAL FINDINGS: We…

LipopolysaccharidesMale0106 biological sciencesSexual SelectionHereditylcsh:Medicine[ SDV.IMM.IA ] Life Sciences [q-bio]/Immunology/Adaptive immunology01 natural sciencesCourtshipSexual Behavior AnimalBehavioral EcologyOrnithology[ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/SymbiosisAnimal Breedinglcsh:Sciencereproductive and urinary physiologyAnimal Managementmedia_commonGenetics0303 health sciencesMultidisciplinaryEcologyAnimal BehaviorInheritance (genetic algorithm)PhenotypePhenotypes[SDV.IMM.IA]Life Sciences [q-bio]/Immunology/Adaptive immunologySexual selectionbehavior and behavior mechanismsSpiteTraitFemaleResearch ArticleEvolutionary ProcessesOffspringmedia_common.quotation_subjectZoologyAnimals WildBiology010603 evolutionary biologyInjectionsBirds03 medical and health sciencesQuantitative Trait HeritableGeneticsAnimalsBustardBiologyProportional Hazards Models030304 developmental biologyEvolutionary Biologylcsh:RCourtshipReproducibility of Resultsbiology.organism_classificationSurvival AnalysisEvolutionary EcologyLinear Modelslcsh:QVeterinary SciencePopulation EcologyZoology[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosis
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Reproductive Biology and Its Impact on Body Size: Comparative Analysis of Mammalian, Avian and Dinosaurian Reproduction

2011

Janis and Carrano (1992) suggested that large dinosaurs might have faced a lower risk of extinction under ecological changes than similar-sized mammals because large dinosaurs had a higher potential reproductive output than similar-sized mammals (JC hypothesis). First, we tested the assumption underlying the JC hypothesis. We therefore analysed the potential reproductive output (reflected in clutch/litter size and annual offspring number) of extant terrestrial mammals and birds (as "dinosaur analogs") and of extinct dinosaurs. With the exception of rodents, the differences in the reproductive output of similar-sized birds and mammals proposed by Janis and Carrano (1992) existed even at the …

Litter (animal)Sexual ReproductionModels AnatomicAnatomy and PhysiologyLitter SizeStatistics as Topiclcsh:MedicineDinosaursReproductive PhysiologyBody Sizelcsh:Sciencereproductive and urinary physiologymedia_commonMammalseducation.field_of_studyMultidisciplinaryEcologyPopulation sizeReproductionhumanitiesReproductionResearch ArticleEvolutionary Processesmedia_common.quotation_subjectPopulationVertebrate PaleontologyZoologyBiologyBirdsstomatognathic systemReproductive biologyJuvenileAnimalseducationBiologySpecies ExtinctionSauropodaEvolutionary BiologyExtinctionlcsh:RBody WeightReproductive SystemPaleontologysocial sciencesbiology.organism_classificationClutch SizeSurvival AnalysisEarth Scienceslcsh:QPaleoecologyPaleobiologyPLoS ONE
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Rats bred for low aerobic capacity become promptly fatigued and have slow metabolic recovery after stimulated, maximal muscle contractions.

2012

AIM. Muscular fatigue is a complex phenomenon affected by muscle fiber type and several metabolic and ionic changes within myocytes. Mitochondria are the main determinants of muscle oxidative capacity which is also one determinant of muscle fatigability. By measuring the concentrations of intracellular stores of high-energy phosphates it is possible to estimate the energy production efficiency and metabolic recovery of the muscle. Low intrinsic aerobic capacity is known to be associated with reduced mitochondrial function. Whether low intrinsic aerobic capacity also results in slower metabolic recovery of skeletal muscle is not known. Here we studied the influence of intrinsic aerobic capac…

Magnetic Resonance SpectroscopyAnatomy and PhysiologyPhosphocreatineEvolutionary Selectionlcsh:MedicineIsometric exerciseBreedingmetaboliset sairaudetBiochemistrychemistry.chemical_compound0302 clinical medicineTriceps surae muscleMyocyteta315lcsh:ScienceMusculoskeletal System0303 health sciencesMultidisciplinarycomplex diseaseMuscle BiochemistryAnatomyAnimal ModelsHydrogen-Ion Concentrationmedicine.anatomical_structureaerobinen kapasiteettiMuscle FatigueMuscleaerobinen suorituskykymedicine.symptomMuscle contractionMuscle ContractionResearch Articlemedicine.medical_specialtyEvolutionary ProcessessupistusominaisuudetBioenergeticsPhosphocreatinePhosphates03 medical and health sciencesModel OrganismsInternal medicinePhysical Conditioning AnimalmedicineGeneticsAnimalsskeletal muscleAdaptationBiologyAerobic capacity030304 developmental biologyEvolutionary BiologyMuscle fatiguelcsh:RSkeletal muscleElectric StimulationRatsraajalihasEndocrinologyMetabolismcontractile propertieschemistryRatlcsh:QEnergy MetabolismPhysiological ProcessesAnimal Genetics030217 neurology & neurosurgeryPLoS ONE
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Successive Invasion-Mediated Interspecific Hybridizations and Population Structure in the Endangered Cichlid Oreochromis mossambicus.

2013

Hybridization between invasive and native species accounts among the major and pernicious threats to biodiversity. The Mozambique tilapia Oreochromis mossambicus, a widely used freshwater aquaculture species, is especially imperiled by this phenomenon since it is recognized by the IUCN as an endangered taxon due to genetic admixture with O. niloticus an invasive congeneric species. The Lower Limpopo and the intermittent Changane River (Mozambique) drain large wetlands of potentially great importance for conservation of O. mossambicus, but their populations have remained unstudied until today. Therefore we aimed (1) to estimate the autochthonous diversity and population structure among genet…

Male0106 biological sciencesConservation geneticsintraspecific hybridization[SDV.BA] Life Sciences [q-bio]/Animal biologyIntrogression[SDV]Life Sciences [q-bio]Endangered speciesBiodiversityLimnetic Ecologylcsh:MedicinePopulation geneticsIntroduced speciesAquaculture01 natural sciencesstructure de la populationIUCN Red Listhttp://aims.fao.org/aos/agrovoc/c_35412Amplified Fragment Length Polymorphism Analysislcsh:ScienceMozambiquePhylogenyComputingMilieux_MISCELLANEOUShybridation intraspécifiqueAnimal ManagementConservation ScienceFreshwater Ecology0303 health sciencesMultidisciplinaryEcologybiologyEcology[SDV.BA]Life Sciences [q-bio]/Animal biologyAgricultureBiodiversityGene Pool[SDV] Life Sciences [q-bio][ SDV.GEN.GPO ] Life Sciences [q-bio]/Genetics/Populations and Evolution [q-bio.PE]FemaleFish FarmingTilapiaResearch ArticleGene FlowOreochromis mossambicusEvolutionary Processesoreochromis mossambicusGenotypeMolecular Sequence DataAgro-Population EcologyGenetic admixture[SDV.BID]Life Sciences [q-bio]/BiodiversityDNA Mitochondrial010603 evolutionary biology03 medical and health sciencesRiversSpecies SpecificityGeneticsAnimalsespèce invasive14. Life underwaterAdaptationBiologyHybridizationSpecies Extinction030304 developmental biology[ SDV.BID ] Life Sciences [q-bio]/BiodiversityEvolutionary Biology[ SDE.BE ] Environmental Sciences/Biodiversity and Ecology[SDV.GEN.GPO]Life Sciences [q-bio]/Genetics/Populations and Evolution [q-bio.PE]Endangered Specieslcsh:RGenetic VariationBayes Theorempopulation structureSequence Analysis DNA15. Life on landL10 - Génétique et amélioration des animauxbiology.organism_classificationGenetics PopulationHaplotypesGenetic PolymorphismHybridization Geneticlcsh:QM12 - Production de l'aquaculturehttp://aims.fao.org/aos/agrovoc/c_4964[SDE.BE]Environmental Sciences/Biodiversity and EcologyIntroduced SpeciesAnimal GeneticsAgroecologyPopulation Genetics
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When the seasons don't fit: Speedy molt as a routine carry-over cost of reproduction

2013

The failure of animals to fit all life-cycle stages into an annual cycle could reduce the chances of successful breeding. In some cases, non-optimal strategies will be adopted in order to maintain the life-cycle within the scope of one year. We studied trade-offs made by a High Arctic migrant shorebird, the red knot Calidris canutus islandica, between reproduction and wing feather molt carried out in the non-breeding period in the Dutch Wadden Sea. We compared primary molt duration between birds undertaking the full migratory and breeding schedule with birds that forego breeding because they are young or are maintained in captivity. Molt duration was ca. 71 days in breeding adults, which wa…

MaleAnimal sexual behaviourTime FactorsAnatomy and PhysiologyAVIAN PRIMARY MOLTCaptivitylcsh:MedicineBreedingMoltingHABITAT USECharadriiformesOrnithologyWings Animallcsh:SciencePhysiological Ecologyeducation.field_of_studyMultidisciplinaryEcologyEcologyReproductionPLOVERS PLUVIALIS-SQUATAROLACost of reproductionCalidrisFeathervisual_artvisual_art.visual_art_mediumBird flightFemaleSeasonsResearch Articlefood.ingredientEvolutionary ProcessesMIGRATION STRATEGIESPopulationZoologyFEATHER QUALITYBody sizeBiologyfoodAnimalsAnimal PhysiologyAdaptationeducationBiologyAnalysis of VarianceEvolutionary BiologyANNUAL CYCLElcsh:RFeathersRED KNOTSSOUTHWARD MIGRATIONMarine EnvironmentsLIFE-CYCLEKNOTS CALIDRIS-CANUTUSEvolutionary Ecologylcsh:QPhysiological ProcessesZoologyEcological Environments
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Laboratory relationships between adult lifetime reproductive success and fitness surrogates in a Drosophila littoralis population.

2011

The difficulties in measuring total fitness of individuals necessitate the use of fitness surrogates in ecological and evolutionary studies. These surrogates can be different components of fitness (e.g. survival or fecundity), or proxies more uncertainly related to fitness (e.g. body size or growth rate). Ideally, fitness would be measured over the lifetime of individuals; however, more convenient short-time measures are often used. Adult lifetime reproductive success (adult LRS) is closely related to the total fitness of individuals, but it is difficult to measure and rarely included in fitness estimation in experimental studies. We explored phenotypic correlations between female adult LRS…

MaleLRSAgingTime FactorsAnimal EvolutionPopulation Dynamicslcsh:MedicineEvolutionary SelectionToxicologykokoNatural Selectionlcsh:Sciencemedia_commoneducation.field_of_studyelinkiertopiirteetMultidisciplinaryEcologyReproductionMortality rateLongevityFecundityBiological EvolutionPhenotypeDrosophilaFemaleReproductionfekunditeettiResearch ArticleEvolutionary ProcessesGenotypeOffspringmedia_common.quotation_subjectfecundityLongevityPopulationFertilityBiologyForms of EvolutionAnimalsMicroevolutioneducationBiologylife history traitsEvolutionary BiologyReproductive successelinikälcsh:RagingpitkäikäisyysOrganismal EvolutionFertilityikääntyminenEvolutionary Ecologyta1181lcsh:QDemography
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