Search results for "FUNGAL"
showing 10 items of 1116 documents
Microbial-biogeography at the scale of France by the use of molecular tools applied to the French soil quality monitoring network (RMQS)
2009
International audience
Molecular detection and monitoring of fungal plant symbionts
2003
International audience
Exploiting Glomus intraradices sequencing data to dissect molecular mechanisms of plant genome control over fungal gene expression in mycorrhiza
2006
International audience
Diversity and complexity of microbial communities from a chlor-alkali tailings dump
2015
Abstract Revegetation of the tailings dumps produced by various industrial activities is necessary to prevent dust storms and erosion and represents a great challenge for ecological restoration. Little is known about the microbial colonisation and community structure of revegetated tailings following site exploitation. Here, we report the sequencing of 16S rRNA and internal transcribed spacer (ITS) fungal RNA gene amplicons from chlor-alkali residue and from an adjacent undisturbed soil to define the composition and assembly of the rhizosphere microbial communities. After quality filtering, a total of 72,373 and 89,929 bacterial sequences and 122,618 and 111,209 fungal sequences remained fo…
Two new species of the genus Ochroconis, O. lascauxensis and O. anomala isolated from black stains in Lascaux Cave, France
2012
In the year 2001, some conspicuous black stains appeared on the walls of Lascaux Cave in France, which progressively disseminated throughout the cave. These black stains were so evident by 2007 that they have become one of the cave's major problems. In a mycological study of the black stains, Ochroconis strains were abundant among the isolates and constituted the major group of melanised fungi. Two new species of the genus Ochroconis, O. lascauxensis and O. anomala, were isolated and described. The description is based on the morphology of the fungi and the phylogenetic relationships of two of its gene regions internal transcribed spacer (ITS) and RNA polymerase II subunit B (RPB2). In addi…
The Largest Subunit of RNA Polymerase II as a New Marker Gene to Study Assemblages of Arbuscular Mycorrhizal Fungi in the Field
2014
Due to the potential of arbuscular mycorrhizal fungi (AMF, Glomeromycota) to improve plant growth and soil quality, the influence of agricultural practice on their diversity continues to be an important research question. Up to now studies of community diversity in AMF have exclusively been based on nuclear ribosomal gene regions, which in AMF show high intra-organism polymorphism, seriously complicating interpretation of these data. We designed specific PCR primers for 454 sequencing of a region of the largest subunit of RNA polymerase II gene, and established a new reference dataset comprising all major AMF lineages. This gene is known to be monomorphic within fungal isolates but shows an…
Candida albicans-epithelial interactions: dissecting the roles of active penetration, induced endocytosis and host factors on the infection process
2012
International audience; Candida albicans frequently causes superficial infections by invading and damaging epithelial cells, but may also cause systemic infections by penetrating through epithelial barriers. C. albicans is a remarkable pathogen because it can invade epithelial cells via two distinct mechanisms: induced endocytosis, analogous to facultative intracellular enteropathogenic bacteria, and active penetration, similar to plant pathogenic fungi. Here we investigated the contributions of the two invasion routes of C. albicans to epithelial invasion. Using selective cellular inhibition approaches and differential fluorescence microscopy, we demonstrate that induced endocytosis contri…
Rbt1 Protein Domains Analysis in Candida albicans Brings Insights into Hyphal Surface Modifications and Rbt1 Potential Role during Adhesion and Biofi…
2013
Cell wall proteins are central to the virulence of Candida albicans. Hwp1, Hwp2 and Rbt1 form a family of hypha-associated cell surface proteins. Hwp1 and Hwp2 have been involved in adhesion and other virulence traits but Rbt1 is still poorly characterized. To assess the role of Rbt1 in the interaction of C. albicans with biotic and abiotic surfaces independently of its morphological state, heterologous expression and promoter swap strategies were applied. The N-terminal domain with features typical of the Flo11 superfamily was found to be essential for adhesiveness to polystyrene through an increase in cell surface hydrophobicity. A 42 amino acid-long domain localized in the central part o…
The role of Pseudomonas fluorescens in the process of Rhizoctonia solani growth inhibition
2014
The aim of conducted research was to determine influence of metabolites produced by Pseudomonas fluorescens on the growth of 4 phytopathogenic strains of Rhizoctonia solani marked R1, R2, R3 and R4 which infect sugar beetroot. The antagonistic properties were assessed with the culture-plate method on PDA medium for P. fluorescens cultured for 4, 6 8, 10 and 24 hours at 25 o C for 5 days. The fungistatic activity of P. fluorescens was determined against the growth rate index and the rate of mycelial growth inhibition. Obtained results prove, that Rhizoctonia spp. strains were both sensitive and resistant to metabolites produced by P. fluorescens. The highest inhibition of the linear growth o…
Biological control of Fusarium culmorum isolated from the cultivation of white asparagus by Pseudomonas fluorescens
2017
Celem badań była ocena wpływu Pseudomonas fluorescens I-4 (Ps I-4) na Fusarium culmorum wyizolowanego z uprawy białego szparaga. Fusarium culmorum i pozostałe grzyby izolowano na podłożach PDA i szparagowym. Wśród izolatów uzyskanych z gleby najbardziej dominującymi patogenami były F. oxysporum i F. culmorum. Właściwości biologiczne nielotnych i lotnych związków Ps I-4 oceniano metodą hodowlano-płytkową na podłożach PDA i Czapka. Aktywność przeciwgrzybową określano na podstawie indeksu tempa wzrostu, zdolności kiełkowania zarodników, stopnia zahamowania wzrostu grzybni i zarodników. Wyniki wykazały różnice w aktywności przeciwgrzybowej P. fluorescens, w zależności od wieku i gęstości hodowl…