Search results for "Factors"

showing 10 items of 10967 documents

Natural Selection Fails to Optimize Mutation Rates for Long-Term Adaptation on Rugged Fitness Landscapes

2008

The rate of mutation is central to evolution. Mutations are required for adaptation, yet most mutations with phenotypic effects are deleterious. As a consequence, the mutation rate that maximizes adaptation will be some intermediate value. Here, we used digital organisms to investigate the ability of natural selection to adjust and optimize mutation rates. We assessed the optimal mutation rate by empirically determining what mutation rate produced the highest rate of adaptation. Then, we allowed mutation rates to evolve, and we evaluated the proximity to the optimum. Although we chose conditions favorable for mutation rate optimization, the evolved rates were invariably far below the optimu…

0106 biological sciencesMutation rateTime FactorsDigital organismsFitness landscapeQH301-705.5Biology010603 evolutionary biology01 natural sciencesCellular and Molecular Neuroscience03 medical and health sciences0302 clinical medicineGeneticsComputer SimulationBiology (General)Selection GeneticMolecular BiologyEcology Evolution Behavior and Systematics030304 developmental biology0303 health sciencesEvolutionary BiologyNatural selectionEcologyModels GeneticComputational Biology15. Life on landAdaptation PhysiologicalBiological EvolutionComputational Biology/Evolutionary ModelingReplication fidelityAsexual populationsEvolvabilityComputational Theory and MathematicsEvolutionary biologyModeling and SimulationViral evolutionMutation (genetic algorithm)MutationDNA Mismatch repairAdaptationAvida030217 neurology & neurosurgeryResearch Article
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Interspecific variation in total phenolic content in temperate brown algae

2017

Marine algae synthesize secondary metabolites such as polyphenols that function as defense and protection mechanisms. Among brown algae, Fucales and Dictyotales (Phaeophyceae) contain the highest levels of phenolic compounds, mainly phlorotannins, that play multiple roles. Four temperate brown algae (Cystoseira amentacea, Cystoseira compressa, Dictyopteris polypodioides and Padina pavonica) were studied for total phenolic contents. Total phenolic content was determined colorimetrically with the Folin-Ciocalteu reagent. Significant differences in total phenolic content were observed between leathery and sheetlike algae and also within each morphological group. Among the four species, the she…

0106 biological sciencesPhaeophyceaePadina pavonicamacromolecular substancesPlant Science010501 environmental sciencesBiology01 natural sciencesGeneral Biochemistry Genetics and Molecular BiologySecondary metaboliteAlgaeBotanyMediterranean SeaTemperate climateSettore BIO/04 - Fisiologia Vegetalelcsh:QH301-705.5External and internal factorTotal phenolic content0105 earth and related environmental sciencesExternal and internal factorsSecondary metabolitesSettore BIO/02 - Botanica Sistematica010604 marine biology & hydrobiologyBiochemistry (medical)DictyotalesInterspecific competitionbiology.organism_classificationBrown algaelcsh:Biology (General)PolyphenolSettore BIO/03 - Botanica Ambientale E ApplicataFucalesJournal of Biological Research - Bollettino della Società Italiana di Biologia Sperimentale
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Gene regulation in parthenocarpic tomato fruit.

2009

Parthenocarpy is potentially a desirable trait for many commercially grown fruits if undesirable changes to structure, flavour, or nutrition can be avoided. Parthenocarpic transgenic tomato plants (cv MicroTom) were obtained by the regulation of genes for auxin synthesis (iaaM) or responsiveness (rolB) driven by DefH9 or the INNER NO OUTER (INO) promoter from Arabidopsis thaliana. Fruits at a breaker stage were analysed at a transcriptomic and metabolomic level using microarrays, real-time reverse transcription-polymerase chain reaction (RT-PCR) and a Pegasus III TOF (time of flight) mass spectrometer. Although differences were observed in the shape of fully ripe fruits, no clear correlatio…

0106 biological sciencesPhysiologyParthenogenesisPlant Biologyseedless fruitPlant SciencetomatoParthenocarpy01 natural sciencesSolanum lycopersicumGene Expression Regulation PlantGene expressionArabidopsis thalianaHormone metabolismPlant Proteins2. Zero hungerchemistry.chemical_classification0303 health sciencesbiologyfood and beveragesRipeningPlantsPlants Genetically ModifiedResearch PapersBiochemistryMetabolomeBiotechnologyCrop and Pasture ProductionINOPlant Biology & Botanyfruit ripeningGenetically Modified03 medical and health sciencesparthenocarpicAuxinBotanyGeneticsGenetically modified tomatoLycopersicon esculentum030304 developmental biologyNutritionfruit quality fruit ripening INO parthenocarpic seedless fruit tomato.Arabidopsis Proteinsfungifruit qualityPlantbiology.organism_classificationSeedless fruitchemistryGene Expression RegulationFruit010606 plant biology & botanyTranscription Factors
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Elicitins trap and transfer sterols from micelles, liposomes and plant plasma membranes

1999

Using elicitins, proteins secreted by some phytopathogenic Oomycetes (Phytophthora) known to be able to transfer sterols between phospholipid vesicles, the transfer of sterols between micelles, liposomes and biological membranes was studied. Firstly, a simple fluorometric method to screen the sterol-carrier capacity of proteins, avoiding the preparation of sterolcontaining phospholipidic vesicles, is proposed. The transfer of sterols between DHE micelles (donor) and stigmasterol or cholesterol micelles (acceptor) was directly measured, as the increase in DHE fluorescence signal. The results obtained with this rapid and easy method lead to the same conclusions as those previously reported, u…

0106 biological sciencesPhytophthoraTime FactorsStigmasterolBiophysics01 natural sciencesMicelleBiochemistryFluorescenceFungal Proteins03 medical and health scienceschemistry.chemical_compoundErgosterolpolycyclic compoundsMicellesPlant Proteins030304 developmental biology0303 health sciencesLiposomeStigmasterolChemistryVesicleAlgal ProteinsCell MembraneProteinsElicitinBiological membraneLipid–protein interactionCell BiologyPlantsElicitinSterolsCholesterolMembraneBiochemistryDehydroergosterolLiposomeslipids (amino acids peptides and proteins)CryptogeinCarrier ProteinsFluorescence anisotropy010606 plant biology & botanyBiochimica et Biophysica Acta (BBA) - Biomembranes
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Short-term response of the slow growing seagrass Posidonia oceanica to simulated anchor impact

2007

Experimental evaluations about the impact of anchors of small vessels have previously shown that each anchoring can on average damage up to six shoots of Posidonia oceanica, removing small amount of biomass and, at the same time, interrupting continuity among shoots. The aim of the paper was to investigate the response of P. oceanica to different damage intensity at two levels of substrata compactness. Three treatments were considered: control (no damage); low damage (simulated anchor damage by three strokes of a hoe); and high damage (six strokes). Disturbance was higher where the substratum was highly penetrable and after one year significant variation was observed among treatments for bo…

0106 biological sciencesPotamogetonaceaeTime FactorsAquatic ScienceOceanography010603 evolutionary biology01 natural sciencesBotanyMediterranean Sea14. Life underwaterShipsAnalysis of VarianceBiomass (ecology)AlismatalesbiologyPhenology010604 marine biology & hydrobiologyfood and beveragesGeneral Medicinebiology.organism_classificationPollutionSea grassHorticultureSeagrassItalyPosidonia oceanicaShootSlow GrowingEnvironmental MonitoringMarine Environmental Research
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Soil health through soil disease suppression: Which strategy from descriptors to indicators?

2007

International audience; Soil is a component of primary importance in crop production, even if it is often neglected, or only regarded as a physical support for the growth of plants. However, with the increasing societal concerns for the sustainability of agriculture, soil must be considered as a living system. Its quality results from the multiple interactions among physicochemical and biological components, notably the microbial communities, primordial for soil function. Crops are threatened by soil-borne diseases. These are often difficult to control, because of the “hidden” status of the pathogens and also because of the absence, noxiousness or lack of efficacy of chemical treatments. In…

0106 biological sciencesSOIL QUALITYmedia_common.quotation_subjectdata analysisSOIL HEALTHmicrobial communitiesSoil ScienceContext (language use)BIOTIC AND ABIOTIC FACTORS[SDV.SA.SDS]Life Sciences [q-bio]/Agricultural sciences/Soil studycomplex mixtures01 natural sciencesMicrobiologyDATA ANALYSISdisease suppressionCULTURAL PRACTICESCultural practiceQuality (business)soil qualityMICROBIAL COMMUNITIESINDICATORmedia_commoncultural practicesbiotic and abiotic factors2. Zero hungerSoil healthsoil healthbusiness.industryEcologyindicatorEnvironmental resource managementDISEASE SUPPRESSIONSANTE DU SOL04 agricultural and veterinary sciences15. Life on landSoil qualityAgricultureSustainability040103 agronomy & agriculture0401 agriculture forestry and fisheriesEnvironmental sciencebusiness010606 plant biology & botanyDiversity (politics)Soil Biology and Biochemistry
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Influence of environmental factors and biogenic habitats on intertidal meiofauna

2017

This study investigated the influence of physical and chemical conditions and biotic factors on the distribution and diversity of meiofauna in intertidal zone along a geographical gradient. At 11 sites along the Italian coast, we studied the concurring role of environmental variables, trophic resources and the presence of habitat-forming species (macroalgae vs. mussels) in controlling the meiofaunal communities. The increase of water temperature combined with local thermal conditions was associated with a decrease in nematodes and copepods, with a consequent decrease in meiofaunal abundance towards the south. However, the increase in salinity, as geographical gradient decreases, and local t…

0106 biological sciencesSettore BIO/07 - EcologiaMeiobenthosIntertidal zoneAquatic Science010603 evolutionary biology01 natural sciencesMeiofauna distributionEnvironmental factorsCommunity compositionTrophic levelAbiotic componentBiotic componentCommunityEcologyIntertidal environment010604 marine biology & hydrobiologyfungiCommunity structureCommunity composition; Environmental factors; Habitat-forming species; Intertidal environment; Meiofauna distribution; Aquatic ScienceEnvironmental factorHabitat-forming specieHabitatEnvironmental scienceHabitat-forming species
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Can sucrose content in the phloem sap reaching field pea seeds (Pisum sativum L.) be an accurate indicator of seed growth potential ?

2003

The composition of the translocates reaching the seeds of pea plants having various nitrogen (N) nutrition regimes was investigated under field situations. Sucrose flow in the phloem sap increased with the node number, but was not significantly different between N nutrition levels. Because N deficiency reduced the number of flowering nodes and the number of seeds per pod, the sucrose flow bleeding from cut peduncles was divided by the number of seeds to give the amount of assimilates available per seed. The sucrose concentration in phloem sap supplied to seeds at the upper nodes was higher than that at the lower nodes. The flow of sucrose delivered to the seeds during the cell division peri…

0106 biological sciencesSucroseTime FactorsSucrosePhysiologyPlant ScienceBiology01 natural sciencesPisum[SDV.BV.BOT] Life Sciences [q-bio]/Vegetal Biology/Botanics03 medical and health scienceschemistry.chemical_compoundField peaSativumNitrogen FixationBotanySaviaSymbiosisComputingMilieux_MISCELLANEOUSPlant Proteins030304 developmental biology2. Zero hunger0303 health sciencesPeasTemperatureMembrane Transport Proteinsfood and beveragesFabaceaeFabaceae[SDV.BV.BOT]Life Sciences [q-bio]/Vegetal Biology/Botanicsbiology.organism_classificationHorticulturePoint of deliverychemistrySeedsPhloemBiomarkers010606 plant biology & botany
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Shift in Tuna Catches due to Ocean Warming.

2017

Ocean warming is already affecting global fisheries with an increasing dominance of catches of warmer water species at higher latitudes and lower catches of tropical and subtropical species in the tropics. Tuna distributions are highly conditioned by sea temperature, for this reason and their worldwide distribution, their populations may be a good indicator of the effect of climate change on global fisheries. This study shows the shift of tuna catches in subtropical latitudes on a global scale. From 1965 to 2011, the percentage of tropical tuna in longliner catches exhibited a significantly increasing trend in a study area that included subtropical regions of the Atlantic and western Pacifi…

0106 biological sciencesTime Factors010504 meteorology & atmospheric sciencesEffects of global warming on oceanslcsh:MedicineMarine and Aquatic SciencesOceanographyGlobal Warming01 natural sciencesOceansTropical climateClimate changeZoologíaPesqueríaslcsh:ScienceIndian OceanNorthern HemisphereLatitudeMultidisciplinaryGeographyFishesTemperatureAgricultureOsteichthyesVertebratesResearch ArticleCartographyOceans and SeasFisheriesClimate changeSede Central IEOSubtropicsAnimalsVulnerability of tropical countries to climate change14. Life underwaterOcean TemperatureTropical tuna distribution0105 earth and related environmental sciencesTropical ClimatePacific OceanTuna010604 marine biology & hydrobiologylcsh:RGlobal warmingOrganismsBiology and Life SciencesTropicsNumerical Analysis Computer-AssistedBodies of WaterModels TheoreticalFisherySea surface temperatureEffect on fisheries13. Climate actionEarth SciencesEnvironmental sciencelcsh:QTunaGeographic areas
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Ergosterol elicits oxidative burst in tobacco cells via phospholipase A2 and protein kinase C signal pathway

2004

Ergosterol, a typical fungal sterol, induced in tobacco (Nicotiana tabacum L. cv. Xanthi) suspension cells the synthesis of reactive oxygen species and alkalization of the external medium that are dependent on the mobilization of calcium from internal stores. We used specific inhibitors to elucidate the signal pathway triggered by ergosterol compared with cryptogein, a proteinaceous elicitor of Phytophthora cryptogea. HerbimycinA and genistein, inhibitors of tyrosine protein kinases, had no effect on the oxidative burst and pH changes induced by bothelicitors.Similarly,H-89,aninhibitorofproteinkinaseA,hadnoeffectontheinductionofthesedefensereactions.However,theresponse to both elicitors was…

0106 biological sciencesTime FactorsCell SurvivalPhysiologyPlant Science01 natural sciencesPhospholipases AFungal Proteins03 medical and health scienceschemistry.chemical_compoundPhospholipase A2ErgosterolPROTEINE KINASE CTobacco[SDV.BBM] Life Sciences [q-bio]/Biochemistry Molecular Biologypolycyclic compoundsGenetics[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyEnzyme InhibitorsEstrenesProtein kinase ACells CulturedProtein Kinase CProtein kinase CComputingMilieux_MISCELLANEOUS030304 developmental biologySulfonamides0303 health sciencesErgosterolbiologyPhospholipase CAlgal ProteinsNeomycinIsoquinolinesPyrrolidinonesSterolElicitorRespiratory burstOxidative StressPhospholipases A2chemistryBiochemistryType C Phospholipasesbiology.proteinlipids (amino acids peptides and proteins)Signal Transduction010606 plant biology & botany
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