Search results for "Flagellate"

showing 10 items of 30 documents

Integrated bio- and carbon-isotope stratigraphy of the Upper Cretaceous Gurpi Formation (Iran): A new reference for the eastern Tethys and its implic…

2018

29 pages; International audience; A high-resolution stratigraphic analysis of the Upper Cretaceous Gurpi Formation has been undertaken in the Shahneshin section (Zagros Basin, Iran). New results on calcareous nannofossils, planktic foraminifers, dinoflagellate cysts and high-resolution carbon and oxygen stable isotopes form the basis of a reference section for the eastern Tethys that spans the upper Coniacian to the late Danian. Carbon-isotope correlation to Gubbio, Italy and the NW German chalk allows for the identification of many isotopic events as well as for the definition of new events in the Campanian and Maastrichtian. Our results allow for a review of the accurate position of the C…

010506 paleontologyStructural basin010502 geochemistry & geophysics01 natural sciencesPaleontology[SDU.STU.GC]Sciences of the Universe [physics]/Earth Sciences/GeochemistryStage (stratigraphy)Calcareous nannofossils14. Life underwater0105 earth and related environmental sciencesbiologyStable isotope ratioDinoflagellate cystsCarbon isotopesDinoflagellatePaleontologyPlanktic foraminiferaPlanktonbiology.organism_classificationZagrosCretaceousStratigraphy13. Climate actionIsotopes of carbonTethyan realm[SDU.STU.ST]Sciences of the Universe [physics]/Earth Sciences/StratigraphyConiacian–MaastrichtianGeologyCretaceous Research
researchProduct

Ocean acidification at a coastal CO2 vent induces expression of stress-related transcripts and transposable elements in the sea anemone Anemonia viri…

2019

Published version, available at: https://doi.org/10.1371/journal.pone.0210358 Ocean acidification threatens to disrupt interactions between organisms throughout marine ecosystems. The diversity of reef-building organisms decreases as seawater CO2 increases along natural gradients, yet soft-bodied animals, such as sea anemones, are often resilient. We sequenced the polyA-enriched transcriptome of adult sea anemone Anemonia viridis and its dinoflagellate symbiont sampled along a natural CO2 gradient in Italy to assess stress levels in these organisms. We found that about 1.4% of the anemone transcripts, but only ~0.5% of the Symbiodinium sp. transcripts were differentially expressed. Processe…

0106 biological sciences0301 basic medicineAtmospheric ScienceMolecular biologyMarine and Aquatic SciencesGene ExpressionRetrotransposonSea anemone01 natural sciencesAnemoniaSequencing techniquesMobile Genetic ElementsMultidisciplinarybiologyQREukaryotaOcean acidificationAnemoneRNA sequencingGenomicsChemistryRetrotransposonsPhysical SciencesMedicineTranscriptome AnalysisResearch ArticleScienceZoology010603 evolutionary biology03 medical and health sciencesGreenhouse GasesCnidariaGenetic ElementsSea WaterGeneticsVDP::Matematikk og Naturvitenskap: 400::Basale biofag: 470Environmental ChemistryAnimalsMarine ecosystemBiology and life sciencesEcology and Environmental SciencesDinoflagellateChemical CompoundsOrganismsTransposable ElementsCorrectionAquatic EnvironmentsComputational BiologyCarbon Dioxidebiology.organism_classificationGenome AnalysisMarine EnvironmentsInvertebratesVDP::Mathematics and natural science: 400::Basic biosciences: 470Research and analysis methods:Genetikk og genomikk: 474 VDP::Marinbiologi:497 VDP::Økologi:488 [VDP]030104 developmental biologySea AnemonesMolecular biology techniquesAtmospheric ChemistryEarth SciencesSeawater
researchProduct

Comparison of Diatoms and Dinoflagellates from Different Habitats as Sources of PUFAs

2019

Recent studies have clearly shown the importance of omega-3 (&omega

0106 biological sciencesALPHA-LINOLENIC ACIDrasvahapotPharmaceutical ScienceFresh Water01 natural sciencesFATTY-ACID-COMPOSITIONchemistry.chemical_compoundDrug DiscoveryFood sciencefreshwaterlcsh:QH301-705.5Pharmacology Toxicology and Pharmaceutics (miscellaneous)chemistry.chemical_classification0303 health sciencespanssarilevätFRESH-WATERalpha-Linolenic acidmicroalgaeFatty AcidsFish oilEicosapentaenoic acid6. Clean waterDHADocosahexaenoic acidEUTROPHICATIONDinoflagellidaGROWTHdinoflagellatesbrackishPolyunsaturated fatty acidpolyunsaturated fatty acidsTOXINBiologyPROFILEArticlediatoms03 medical and health sciencesFish OilsFISHFatty Acids Omega-3PhytoplanktonpiilevätQUALITYSaline WatersEcosystem030304 developmental biologyBrackish water010604 marine biology & hydrobiologyfungita1183ta1182Fatty acidmarineEPAmikrolevätluonnonaineetomegarasvahapotmerivesilcsh:Biology (General)chemistry416 Food Science13. Climate actionmakea vesiMarine Drugs
researchProduct

Plankton Tracker: A novel integrated system to investigate the dynamic sinking behavior in phytoplankton

2020

Abstract Phytoplankton sinking is an important property that can determine community composition, affecting nutrient and light absorption in the photic zone, and influencing biogeochemical cycling via material loss to the deep ocean. To date, the difficulty in exploring the sinking processes is partly due to methodological limitations in measuring phytoplankton sinking rate. However, in the last decade, works have illustrated various methods based on some non-invasive and low perturbing approaches (laser scanner, video-microscopy, fluorescence spectroscopy). In this study, we review the methods for sinking rate estimation and describe the Plankton Tracker, a novel integrated system to inves…

0106 biological sciencesBiogeochemical cycle010603 evolutionary biology01 natural sciencesDeep seaCoscinodiscus sp.PhytoplanktonPhotic zoneVideo-microscopyEcology Evolution Behavior and SystematicsIndividual-based tracking methodEcologybiology010604 marine biology & hydrobiologyApplied MathematicsEcological ModelingDinoflagellatePlanktonbiology.organism_classificationComputer Science ApplicationsOceanographyComputational Theory and MathematicsModeling and SimulationPhytoplanktonSinking behaviorTrajectoryEnvironmental science
researchProduct

Larger cell or colony size in winter, smaller in summer – a pattern shared by many species of Lake Kinneret phytoplankton

2017

We examined an 8.5-year record (2004-2012) of cell size data for phytoplankton species from Lake Kinneret, Israel, sampled weekly or at 2-week intervals and determined microscopically by the same person. Many of the species abundant enough to be counted year-round showed a typical seasonal cell size pattern that repeated annually: cell diameter was maximal in winter and minimal in summer. This pattern was shared by species from different taxonomic groups including cyanobacteria, chlorophyta, and dinoflagellates. Similarly, in colonial species of diatoms, chlorophyta, and cyanobacteria the number of cells per colony was larger in winter and smaller in summer. We postulated that the seasonal …

0106 biological sciencesCell diameterCyanobacteriabiologyEcology010604 marine biology & hydrobiologytemperaturesinking velocityChlorophytachlorophytaAquatic Sciencebiology.organism_classificationdinoflagellate010603 evolutionary biology01 natural sciencescyanobacteriaCell sizeReynolds numberseasonal Stokes' equationPhytoplanktonSettore BIO/03 - Botanica Ambientale E ApplicataWater densitychlorophyta; cyanobacteria; dinoflagellates; Reynolds number; sinking velocity; seasonal Stokes' equation; temperatureTaxonomic rankWater Science and Technology
researchProduct

2020

Phytoplankton synthesizes essential ω-3 and ω-6 polyunsaturated fatty acids (PUFA) for consumers in the aquatic food webs. Only certain phytoplankton taxa can synthesize eicosapentaenoic (EPA; 20:5ω3) and docosahexaenoic acid (DHA; 22:6ω3), whereas all phytoplankton taxa can synthesize shorter-chain ω-3 and ω-6 PUFA. Here, we experimentally studied how the proportion, concentration (per DW and cell-specific), and production (µg FA L−1 day−1) of ω-3 and ω-6 PUFA varied among six different phytoplankton main groups (16 freshwater strains) and between exponential and stationary growth phase. EPA and DHA concentrations, as dry weight, were similar among cryptophytes and diatoms. However, Crypto…

0106 biological sciencesCyanobacteriachemistry.chemical_classificationbiology010604 marine biology & hydrobiologyDinoflagellateGolden algaebiology.organism_classification010603 evolutionary biology01 natural sciencesBiochemistrychemistryDry weightDocosahexaenoic acidPhytoplanktonGreen algaeFood scienceMolecular BiologyPolyunsaturated fatty acidBiomolecules
researchProduct

Driving factors of dinoflagellate cyst distribution in surface sediments of aMediterranean lagoon with limited access to the sea

2016

International audience; Seasonal distribution of dinoflagellate cysts were studied at five surface sediment study stations in Ghar El MelhLagoon (GML) (Tunisia) in relation to physicochemical parameters and phytoplankton abundance in the watercolumn. At least sixteen dinocyst types were identified, dominated mainly by Protoperidinium spp., Scrippsiellatrochoidea complex, Lingulodinum machaerophorum, Alexandrium spp. and Gymnodinium spp., along with manyround brown cysts. Cyst abundance ranged from 0 to 229 g−1 dry sediment. No significant differences in cyst distributionwere found among stations, though a significant variation was observed among seasons with cyst dominancein autumn. No sign…

0106 biological sciencesGeologic SedimentsTunisia010504 meteorology & atmospheric sciencesGhar El Melh lagoonAquatic ScienceBiologyOceanography01 natural sciences[ SDE ] Environmental SciencesMediterranean seaWater columnPhytoplanktonparasitic diseasesMediterranean SeaAnimalsDinocystDominance (ecology)Seawater14. Life underwaterGymnodiniumAbiotic factors0105 earth and related environmental sciencesEcology010604 marine biology & hydrobiologyDinoflagellate cystsDinoflagellateSedimentbiology.organism_classificationPollutionOceanography[SDE]Environmental SciencesPhytoplanktonDinoflagellidaSeasonsEnvironmental Monitoring
researchProduct

Bacterioplankton dynamics driven by interannual and spatial variation in diatom and dinoflagellate spring bloom communities in the Baltic Sea

2020

17 pages, 6 figures, 2 tables, supporting information https://doi.org/10.1002/lno.11601.-- This is the pre-peer reviewed version of the following article: María Teresa Camarena‐Gómez, Clara Ruiz‐González, Jonna Piiparinen, Tobias Lipsewers, Cristina Sobrino, Ramiro Logares, Kristian Spilling, Bacterioplankton dynamics driven by interannual and spatial variation in diatom and dinoflagellate spring bloom communities in the Baltic Sea, Limnology and Oceanography 66(1): 255-271 (2021), which has been published in final form at https://doi.org/10.1002/lno.11601. This article may be used for non-commercial purposes in accordance with Wiley Terms and Conditions for Use of Self-Archived Versions

0106 biological sciencesSUCCESSIONLimnologyAquatic ScienceOceanography01 natural sciencesAlgal bloomsuolapitoisuusbakteerit03 medical and health sciencesBACTERIAL PRODUCTIONtaksonomiaPHYTOPLANKTONPhytoplanktonpiilevätDISSOLVED ORGANIC-CARBON14. Life underwaterlajitleväkukinta030304 developmental biology0303 health sciencespanssarilevätPRODUCTIVITYLIMITATIONbiologykoostumus010604 marine biology & hydrobiologyfungiplanktonDinoflagellateVDP::Matematikk og Naturvitenskap: 400BacterioplanktoneliöyhteisötSpring bloomPlanktonVDP::Matematikk og Naturvitenskap: 400::Zoologiske og botaniske fag: 480::Marinbiologi: 497mikrolevätbiology.organism_classificationDiatomOceanographyGeography1181 Ecology evolutionary biologyGROWTHPOPULATIONSCRENOTHRIXABUNDANCElämpötilaLimnology and Oceanography
researchProduct

Trophic upgrading via the microbial food web may link terrestrial dissolved organic matter to Daphnia

2017

Direct consumption of allochthonous resources generally yields poor growth and reproduction in zooplankton, but it is still unclear how trophic upgrading of terrestrial dissolved organic matter (tDOM) via the microbial food web may support zooplankton. We compared survival, somatic growth and reproduction of Daphnia magna fed with the heterotrophic flagellate Paraphysomonas vestita and three algal diets. Paraphysomonas was fed lake bacteria that used tDOM as a substrate to simulate an allochthonous diet that zooplankton encounter in lakes. The highest survival, growth and reproduction was achieved with a diet of Cryptomonas, while Daphnia performance was the worst when fed Microcystis. Para…

0106 biological sciencesallochthonyrasvahapotAquatic Sciencefood quality010603 evolutionary biology01 natural sciencesDaphniasterolPhytoplanktonDissolved organic carbonEcology Evolution Behavior and SystematicsTrophic levelsterolitMicrobial food webEcologybiologyEcology010604 marine biology & hydrobiologyplanktonfungiheterotrophic flagellatebiology.organism_classificationSterolvesikirputphytoplanktonEnvironmental scienceta1181Food qualityravintoverkotPUFA
researchProduct

Eutrophication and browning influence Daphnia nutritional ecology

2019

Climate change and land-use practices can enhance lake eutrophication and browning, which influence phytoplankton composition by decreasing the availability of food high in nutritional quality (algae) and increasing the abundance of low-quality food (terrestrial detritus, bacteria) for herbivorous zooplankton. Nutritionally valuable algae for zooplankton are rich in essential biomolecules such as amino acids, polyunsaturated fatty acids (PUFAs), sterols, and phosphorus. We performed laboratory experiments and showed a stronger positive relationship between zooplankton (Daphnia) cumulative offspring number and availability of high-quality algae (Cryptophytes: Rhodomonas/Cryptomonas; and Chry…

0106 biological scienceszooplanktonrasvahapotAquatic Scienceaminohapot010603 evolutionary biology01 natural sciencesZooplanktonDaphniafatty acidsbakteeritPhytoplankton compositionPhytoplanktonBrowningbacteriaNutritional ecologyWater Science and Technology2. Zero hungeramino acidsheteronanoflagellatesbiologypolyunsaturated sterolsEcology010604 marine biology & hydrobiologyfungiplanktonbiology.organism_classification13. Climate actionphytoplanktonEutrophication
researchProduct