Search results for "Fragment"

showing 10 items of 1612 documents

A detailed MSn study for the molecular identification of a dimer formed from oxidation of pinene

2016

Abstract Dimeric products formed in the oxidation of α- and β-pinene have been frequently observed in laboratory and field studies of biogenic SOA formation. While their existence is undoubted, their exact chemical structures remain unclear. This study uses a combined two step approach aiming on the molecular identification of the most important of the various dimers that have been observed in biogenic secondary organic aerosol formation, a dimer with the molecular weight 358 g mol−1. The first step is the application of a functional group derivatization technique (esterification) to quantify the number of carboxylic acid groups in the target molecule. Based on the detailed interpretation o…

chemistry.chemical_classificationAtmospheric Science010504 meteorology & atmospheric sciencesDimerCarboxylic acid010501 environmental sciencesMass spectrometry01 natural scienceschemistry.chemical_compoundchemistryFragmentation (mass spectrometry)Computational chemistryReagentFunctional groupOrganic chemistryMoleculeDerivatization0105 earth and related environmental sciencesGeneral Environmental ScienceAtmospheric Environment
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Radioactive labeling of defined HPMA-based polymeric structures using [18F]FETos for in vivo imaging by positron emission tomography.

2009

During the last decades polymer-based nanomedicine has turned out to be a promising tool in modern pharmaceutics. The following article describes the synthesis of well-defined random and block copolymers by RAFT polymerization with potential medical application. The polymers have been labeled with the positron-emitting nuclide fluorine-18. The polymeric structures are based on the biocompatible N-(2-hydroxypropyl)-methacrylamide (HPMA). To achieve these structures, functional reactive ester polymers with a molecular weight within the range of 25,000-110,000 g/mol were aminolyzed by 2-hydroxypropylamine and tyramine (3%) to form (18)F-labelable HPMA-polymer precursors. The labeling procedure…

chemistry.chemical_classificationBiodistributionAcrylamidesFluorine RadioisotopesPolymers and PlasticsPolymersRadical polymerizationSize-exclusion chromatographyRadiochemistryBioengineeringChain transferPolymerPolymerizationRatsBiomaterialsPolymerizationchemistryIsotope LabelingPositron-Emission TomographyPolymer chemistryMaterials ChemistryAnimalsReversible addition−fragmentation chain-transfer polymerizationPreclinical imagingBiotransformationBiomacromolecules
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Deglycosylated bleomycin triggers apoptosis in laryngeal carcinoma cells in a caspase and reactive oxygen species independent manner

2008

Background:  Bleomycin-A2, a member of a family of glycopeptide antibiotics, has potent antitumor activity against a range of lymphomas, head and neck cancer and germ cell tumors. However, little is known about the biologic activity of the carbohydrate moiety in Bleomycin-A2-induced cytotoxicity. Methods:  We compared the capacity of Bleomycin-A2 and its deglycosylated form (deglycoBleomycin-A2) to induce cell death. Apoptosis was analyzed by cell nuclear staining with Hoechst 33342 dye and DNA fragmentation. The signal transduction pathway was measured through Western blotting and production of reactive oxygen species (ROS). Results:  When tested on HEp-2 laryngeal carcinoma cells, Bleomyc…

chemistry.chemical_classificationCancer ResearchReactive oxygen speciesProgrammed cell deathbiologyMolecular biologyPathology and Forensic MedicineOtorhinolaryngologyBleomycin A2chemistryApoptosisImmunologybiology.proteinPeriodonticsDNA fragmentationViability assayOral SurgeryCytotoxicityCaspaseJournal of Oral Pathology & Medicine
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Functionalization of TiO2Nanoparticles with Semiconducting Polymers Containing a Photocleavable Anchor Group and Separation via Irradiation Afterward

2014

The controlled radical polymerization (RAFT polymerization) of semiconducting polymers based on poly(4,4′-dimethyl-triphenylamine) is described. These polymers are afterward end-functionalized with a photocleavable group and an anchor unit (catechol) for oxidic nanoparticles (NPs). Serving as a reference, polystyrene oligomers with the same end groups are also synthesized. Using these polymers allows functionalization of the TiO2-NPs, leading to an improved solubility and miscibility in organic solvents or polymer matrices. Irradiation in the UV region is used to split the photocleavable group and remove the polymer chains from the NPs, which leads to their aggregation.

chemistry.chemical_classificationCatecholPolymers and PlasticsOrganic ChemistryRadical polymerizationtechnology industry and agricultureNanoparticlePolymerCondensed Matter PhysicsMiscibilitychemistry.chemical_compoundchemistryPolymer chemistryMaterials ChemistrySurface modificationReversible addition−fragmentation chain-transfer polymerizationPolystyrenePhysical and Theoretical ChemistryMacromolecular Chemistry and Physics
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Model studies on a diastereoselective synthesis of the C(33)–C(37) fragment of Amphotericin B

2003

Abstract A new, short and highly diastereoselective synthetic route aiming at the C(33)–C(37) fragment of Amphotericin B has been developed. Studies with a model aldehyde (benzaldehyde) have given very promising results: the desired stereochemistry of all four stereocenters of the target molecule has been achieved with high diastereoselection. The stereochemistry of three key intermediates and the target segment has been confirmed by X-ray crystallography.

chemistry.chemical_classificationChemistryStereochemistryFragment (computer graphics)Organic ChemistryEnantioselective synthesisBiochemistryAldehydeStereocenterBenzaldehydechemistry.chemical_compoundAldol reactionAmphotericin BDrug DiscoverymedicineMoleculemedicine.drugTetrahedron
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Collision-Induced Dissociation of Imidazolium-Based Zwitterionic Liquids

2009

Fragmentation pathways of some imidazolium based zwitterionic liquids—3-(3-alkyl-1-imidazolio)-propane sulfonates and 3-(2-methyl-3-alkyl-1-imidazolio)-propane sulfonates—have been studied by tandem electrospray mass spectrometry and collision-induced dissociation. The relative abundances of the lowest energy fragment ions depend on the length of the alkyl chain at the IIN of the imidazolium ring and the cone voltage. The first fragment ions originate from the scission of Cnon aromatic–N bond of compounds investigated, but with increasing collision energy, scission of C–C bonds occurs. Aggregates of the general formula [(M + H) x + (M) y]+ ( x;y = 1–2) formed. Methyl substituted zwitterion…

chemistry.chemical_classificationCollision-induced dissociationChemistryElectrospray ionizationGeneral MedicineMass spectrometryMedicinal chemistryAtomic and Molecular Physics and OpticsDissociation (chemistry)IonFragmentation (mass spectrometry)Organic chemistrySpectroscopyAlkylBond cleavageEuropean Journal of Mass Spectrometry
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Ethanedithiol diacetate

2001

Ethane-1,2-diyl S,S′-bis­(thio­acetate), H3CC(O)SCH2CH2SC(O)CH3 or C6H10O2S2, forms centrosymmetric mol­ecules in the solid state and the molecular structure determined by X-ray crystallography is in good agreement with that obtained by density functional geometry optimization. The planarity of the O=C—S—C fragment, which is also found in structures of other thio­acetates, is attributed to a strong np(S)–π*(C—O) orbital interaction.

chemistry.chemical_classificationCrystallographychemistryFragment (logic)ThiolSolid-stateMoleculeGeneral Materials ScienceGeneral ChemistryCondensed Matter PhysicsEnergy minimizationPlanarity testingActa Crystallographica Section E Structure Reports Online
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2017

Abstract. Further development and optimisation of a previously described ion trap aerosol mass spectrometer (IT-AMS) are presented, which resulted in more reproducible and robust operation and allowed for the instrument's first field deployment. Results from this 11-day-long measurement indicate that the instrument is capable of providing quantitative information on organics, nitrate, and sulfate mass concentrations with reasonable detection limits (0.5–1.4 µg m−3 for 1 h averages) and that results obtained with the IT-AMS can directly be related to those from Aerodyne aerosol mass spectrometers. The capability of the IT-AMS to elucidate the structure of fragment ions is demonstrated via an…

chemistry.chemical_classificationDetection limitAtmospheric Science010504 meteorology & atmospheric sciences010401 analytical chemistryAnalytical chemistryMass spectrometry01 natural sciencesOrganic compound0104 chemical sciencesAerosolIonchemistryFragmentation (mass spectrometry)MoleculeIon trap0105 earth and related environmental sciencesAtmospheric Measurement Techniques
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Gaschromatographisch-massenspektrometrische identifizierung der durch umsetzung von aminen mit isocyanaten gebildeten harnstoffderivate

1977

Abstract Gas chromatographic-mass spectrometric identification of urea derivatives formed by the reaction of amines with isocyanates N,N′-Di- and N,N′,N′-trisubstituted ureas constitute suitable derivatives for the gas chromatographic (GC) determination of primary and secondary amines. The GC identification of N- tert. -butyl-,N′,N′-alkyl urea derivatives presented in the first communication has been succesfully confirmed by mass spectrometry (MS) and mass fragmentometry. The reproduced mass spectra of six N- tert. -butyl-,N′,N′-alkyl ureas were interpreted according to the decomposition mechanisms of less complicated alkyl ureas known from the literature. Using combined GC-MS the detection…

chemistry.chemical_classificationDetection limitChromatographyChemistryMass fragmentometryOrganic ChemistryGeneral MedicineMass spectrometryBiochemistryAnalytical ChemistryMass spectrumOrganic chemistryKovats retention indexUrea derivativesAlkylJournal of Chromatography A
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Bacterial communities in Arctic fjelds of Finnish Lapland are stable but highly pH-dependent

2007

The seasonal and spatial variations of microbial communities in Arctic fjelds of Finnish Lapland were studied. Phospholipid fatty acid analysis (PLFA) and terminal restriction fragment analysis (T-RFLP) of amplified 16S rRNA genes were used to assess the effect of soil conditions and vegetation on microbial community structures along different altitudes of two fjelds, Saana and Jehkas. Terminal restriction fragments were additionally analysed from c . 160 cloned sequences and isolated bacterial strains and matched with those of soil DNA samples. T-RFLP and PLFA analyses indicated relatively similar microbial communities at various altitudes and under different vegetation of the two fjelds. …

chemistry.chemical_classificationEcologybiologyFatty acidVegetationbiology.organism_classificationApplied Microbiology and BiotechnologyMicrobiologyRestriction fragmentchemistryMicrobial population biologySoil pHSoil waterBotanybiology.proteinRestriction fragment length polymorphismAcidobacteriaFEMS Microbiology Ecology
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