Search results for "Functional theory"

showing 10 items of 1012 documents

Nuclear quantum effects in liquid water from path-integral simulations using anab initioforce-matching approach

2014

We have applied path integral simulations, in combination with new ab initio based water potentials, to investigate nuclear quantum effects in liquid water. Because direct ab initio path integral simulations are computationally expensive, a flexible water model is parameterized by force-matching to density functional theory-based molecular dynamics simulations. The resulting effective potentials provide an inexpensive replacement for direct ab inito molecular dynamics simulations and allow efficient simulation of nuclear quantum effects. Static and dynamic properties of liquid water at ambient conditions are presented and the role of nuclear quantum effects, exchange-correlation functionals…

Chemical Physics (physics.chem-ph)PhysicsStatistical Mechanics (cond-mat.stat-mech)Liquid waterBiophysicsAb initioFOS: Physical sciencesComputational Physics (physics.comp-ph)Condensed Matter - Soft Condensed MatterCondensed Matter PhysicsMolecular dynamicsForce matchingPhysics - Chemical PhysicsQuantum mechanicsDispersion (optics)Path integral formulationWater modelSoft Condensed Matter (cond-mat.soft)Density functional theoryPhysical and Theoretical ChemistryPhysics - Computational PhysicsMolecular BiologyCondensed Matter - Statistical MechanicsMolecular Physics
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The adiabatic strictly-correlated-electrons functional : kernel and exact properties

2016

We investigate a number of formal properties of the adiabatic strictly-correlated electrons (SCE) functional, relevant for time-dependent potentials and for kernels in linear response time-dependent density functional theory. Among the former, we focus on the compliance to constraints of exact many-body theories, such as the generalised translational invariance and the zero-force theorem. Within the latter, we derive an analytical expression for the adiabatic SCE Hartree exchange-correlation kernel in one dimensional systems, and we compute it numerically for a variety of model densities. We analyse the non-local features of this kernel, particularly the ones that are relevant in tackling p…

Chemical Physics (physics.chem-ph)PhysicsStrongly Correlated Electrons (cond-mat.str-el)010304 chemical physicsta114FOS: Physical sciencesGeneral Physics and Astronomyformal probertiesElectronHartreeExpression (computer science)01 natural sciencesadiabatic strictly-correlated electronsCondensed Matter - Strongly Correlated ElectronskernelKernel (statistics)Physics - Chemical Physics0103 physical sciencesDensity functional theoryStatistical physicsPhysical and Theoretical ChemistryVariety (universal algebra)010306 general physicsAdiabatic processFocus (optics)
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Dynamic Self-Consistent Field Approach for Studying Kinetic Processes in Multiblock Copolymer Melts

2020

The self-consistent field theory is a popular and highly successful theoretical framework for studying equilibrium (co)polymer systems at the mesoscopic level. Dynamic density functionals allow one to use this framework for studying dynamical processes in the diffusive, non-inertial regime. The central quantity in these approaches is the mobility function, which describes the effect of chain connectivity on the nonlocal response of monomers to thermodynamic driving fields. In a recent study [Mantha et al, Macromolecules 53, 3409 (2020)], we have developed a method to systematically construct mobility functions from reference fine-grained simulations. Here we focus on melts of linear chains …

Chemical Physics (physics.chem-ph)Physicsordering kineticsMesoscopic physicsPolymers and PlasticsField (physics)Thermodynamic equilibriumDynamic structure factorFOS: Physical sciencesNon-equilibrium thermodynamicsContext (language use)General ChemistryCondensed Matter - Soft Condensed MatterDynamic densityArticlelcsh:QD241-441lcsh:Organic chemistrydynamic density functional theoryPhysics - Chemical Physicstwo-length scale copolymerssingle chain structure factorSoft Condensed Matter (cond-mat.soft)Density functional theoryStatistical physicsmultiblock copolymersPolymers
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Inside Back Cover: Elucidation of Pathways for NO Electroreduction on Pt(111) from First Principles (Angew. Chem. Int. Ed. 28/2015)

2015

Chemical engineeringChemistryInorganic chemistryDensity functional theoryCover (algebra)General ChemistryCatalysisAngewandte Chemie International Edition
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Molecular precursors of mesostructured silica materials in the atrane route: A DFT/GIAO/NBO theoretical study

2007

Abstract Quantum chemical calculations using density functional theory have been carried out to investigate two assumed molecular precursors and identified as silatranes (N[OCH2CH2]3Si–OCH2CH2N–(CH2CH2OH)2 and N[OCH2CH2]3Si–OCH2CH2N–(CH2CH2OH)2Na+) which are present in the synthesis of mesoporous silica based material namely “the atrane route”. One of the ways in this synthesis leads to the well-known MCM-41. Additionally, in this work has been also investigated two others molecules such as triethanolamine (TEAH3) and sodatrane which are present in the medium. Gas phase and solution equilibrium geometries of the previous molecules were fully optimized at B3LYP level, modeling solvent effect…

Chemical shiftCondensed Matter PhysicsBiochemistrychemistry.chemical_compoundSolvation shellAtranechemistryComputational chemistryMoleculeDensity functional theoryPhysical and Theoretical ChemistrySolvent effectsBasis setNatural bond orbitalJournal of Molecular Structure: THEOCHEM
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DFT calculation of structures and NMR chemical shifts of simple models of small diameter zigzag single wall carbon nanotubes (SWCNTs)

2011

Linearly conjugated benzene rings (acenes), belt-shape molecules (cyclic acenes) and model single wall carbon nanotubes (SWCNTs) were fully optimized at the unrestricted level of density functional theory (UB3LYP/6-31G*). The models of SWCNTs were selected to get some insight into the potential changes of NMR chemical shift upon systematic increase of the molecular size. The theoretical NMR chemical shifts were calculated at the B3LYP/pcS-2 level of theory using benzene as reference. In addition, the change of radial breathing mode (RBM), empirically correlated with SWCNT diameter, was directly related with the radius of cyclic acenes. Both geometrical and NMR parameters were extrapolated t…

Chemical shiftGeneral ChemistryCarbon nanotubeCarbon-13 NMRConjugated systemlaw.inventionBond lengthchemistry.chemical_compoundchemistryComputational chemistrylawMoleculePhysical chemistryGeneral Materials ScienceDensity functional theoryBenzeneMagnetic Resonance in Chemistry
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Giant Mechanocaloric Effects in Fluorite-Structured Superionic Materials

2016

Mechanocaloric materials experience a change in temperature when a mechanical stress is applied on them adiabatically. Thus, far, only ferroelectrics and superelastic metallic alloys have been considered as potential mechanocaloric compounds to be exploited in solid-state cooling applications. Here we show that giant mechanocaloric effects occur in hitherto overlooked fast ion conductors (FIC), a class of multicomponent materials in which above a critical temperature, Ts, a constituent ionic species undergoes a sudden increase in mobility. Using first-principles and molecular dynamics simulations, we found that the superionic transition in fluorite-structured FIC, which is characterized by …

Chemical substanceMaterials scienceCondensed matter physicsMechanical EngineeringIonic bondingBioengineering02 engineering and technologyGeneral Chemistry021001 nanoscience & nanotechnologyCondensed Matter Physics01 natural scienceslaw.inventionMolecular dynamicslaw0103 physical sciencesUltimate tensile strengthFast ion conductorFrenkel defectGeneral Materials ScienceDensity functional theoryHydrostatic equilibrium010306 general physics0210 nano-technologyNano Letters
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Short hydrogen bonds enhance nonaromatic protein-related fluorescence

2021

Significance Intrinsic fluorescence of nonaromatic amino acids is a puzzling phenomenon with an enormous potential in biophotonic applications. The physical origins of this effect, however, remain elusive. Herein, we demonstrate how specific hydrogen bond networks can modulate fluorescence. We highlight the key role played by short hydrogen bonds, present in the protein structure, on the ensuing fluorescence. We provide detailed experimental and molecular evidence to explain these unusual nonaromatic optical properties. Our findings should benefit the design of novel optically active biomaterials for applications in biosensing and imaging.

Chemical transformationOptics and PhotonicsGlutamineIntrinsic fluorescenceMolecular Dynamics SimulationPhotochemistryFluorescenceAb initio molecular dynamicsAmmoniaHumansSingle amino acidshort hydrogen bondDensity Functional TheoryMultidisciplinaryHydrogen bondChemistryintrinsic fluorescenceultraviolet fluorescenceHydrogen BondingConical intersectionFluorescenceBiophysics and Computational BiologyExcited statePhysical Sciences408PeptidesProceedings of the National Academy of Sciences of the United States of America
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ZrO2 Acting as a Redox Catalyst

2016

Surface defects are discussed and reviewed with regards to the use of ZrO2 in applications involving interactions with CO, H2, CH4, CO2, water and hydrocarbons. Studies of catalytic partial oxidation of methane reveal that part of the surface lattice oxygen in terraces can be removed by methane at high temperatures (e.g. 900 °C). The reaction proceeds via a surface confined redox mechanism. The studies presented here also highlight that defects play a decisive role in the water–gas-shift reaction, since the reaction is likely carried out via OH groups present at defect sites, which are regenerated by dissociating water. Hydroxyl chemistry on ZrO2 is briefly reviewed related to the studies p…

Chemistry(all)Tar oxidationInorganic chemistryHydroxyl groups02 engineering and technology010402 general chemistry01 natural sciencesRedoxCatalysisMethaneDissociation (chemistry)CatalysisRedoxHSchemistry.chemical_compoundAdsorptionZrO2Partial oxidationbiologyH2SCPOMActive siteGeneral ChemistryZrO021001 nanoscience & nanotechnology0104 chemical scienceschemistrybiology.proteinDensity functional theory0210 nano-technologyWGSTopics in Catalysis
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Large-Cavity Coronoids with Different Inner and Outer Edge Structures

2020

Coronoids, polycyclic aromatic hydrocarbons with geometrically defined cavities, are promising model structures of porous graphene. Here, we report the on-surface synthesis of C168 and C140 coronoids, referred to as [6]- and [5]coronoid, respectively, using 5,9-dibromo-14-phenylbenzo[m]tetraphene as the precursor. These coronoids entail large cavities (>1 nm) with inner zigzag edges, distinct from their outer armchair edges. While [6]coronoid is planar, [5]coronoid is not. Low-temperature scanning tunneling microscopy/spectroscopy and noncontact atomic force microscopy unveil structural and electronic properties in accordance with those obtained from density functional theory calculation…

Chemistry530 PhysicsPorous grapheneCommunicationAromaticityGeneral ChemistryEdge (geometry)010402 general chemistry01 natural sciencesBiochemistryMolecular physicsCatalysis0104 chemical scienceslaw.inventionColloid and Surface ChemistryPlanarZigzaglaw540 ChemistryDensity functional theoryScanning tunneling microscopeSpectroscopyJournal of the American Chemical Society
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