Search results for "GENE-EXPRESSION"

showing 10 items of 48 documents

Arabidopsis mutant dnd2 exhibits increased auxin and abscisic acid content and reduced stomatal conductance

2019

Arabidopsis thaliana cyclic nucleotide-gated ion channel gene 4 (AtCNGC4) loss-of-function mutant dnd2 exhibits elevated accumulation of salicylic acid (SA), dwarfed morphology, reduced hypersensitive response (HR), altered disease resistance and spontaneous lesions on plant leaves. An orthologous barley mutant, nec1, has been reported to over-accumulate indole-3-acetic acid (IAA) and to exhibit changes in stomatal regulation in response to exogenous auxin. Here we show that the Arabidopsis dnd2 over-accumulates both IAA and abscisic acid (ABA) and displays related phenotypic and physiological changes, such as, reduced stomatal size, higher stomatal density and stomatal index. dnd2 showed i…

0106 biological sciences0301 basic medicineHypersensitive responseStomatal conductanceDrought stressPhysiologyMutantArabidopsisPlant ScienceBOX PROTEIN TIR101 natural sciencesSIGNALING PATHWAYS03 medical and health scienceschemistry.chemical_compoundBarley nec1Abscisic acidAuxinGene Expression Regulation PlantArabidopsisLESION MIMIC MUTANTSGeneticsDISEASE RESISTANCEAuxinPLANTAbscisic acid1183 Plant biology microbiology virologyGENE-EXPRESSION2. Zero hungerchemistry.chemical_classificationbiologyIndoleacetic AcidsAbiotic stressArabidopsis Proteinsfungifood and beveragesGATED ION CHANNELSHordeumbiology.organism_classificationDroughts030104 developmental biologychemistryArabidopsis dnd2SALT-STRESSPlant StomataBiophysicsINNATE IMMUNITYAIR HUMIDITYSalicylic acid010606 plant biology & botany
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Transcriptome analysis of the Populus trichocarpa–Rhizophagus irregularis Mycorrhizal Symbiosis: Regulation of Plant and Fungal Transportomes under N…

2017

Nutrient transfer is a key feature of the arbuscular mycorrhizal (AM) symbiosis. Valuable mineral nutrients are transferred from the AM fungus to the plant, increasing its fitness and productivity, and, in exchange, the AM fungus receives carbohydrates as an energy source from the plant. Here, we analyzed the transcriptome of the Populus trichocarpa-Rhizophagus irregularis symbiosis using RNA-sequencing of non-mycorrhizal or mycorrhizal fine roots, with a focus on the effect of nitrogen (N) starvation. In R. irregularis, we identified 1,015 differentially expressed genes, whereby N starvation led to a general induction of gene expression. Genes of the functional classes of cell growth, memb…

0106 biological sciences0301 basic medicineRhizophagus irregularisMICROBE INTERACTIONSPhysiologyarbuscule[SDV]Life Sciences [q-bio]racine finePlant Science01 natural sciencesnitrogenTranscriptomeGene Expression Regulation PlantMycorrhizaeLOTUS-JAPONICUSGLOMUS-INTRARADICESPlant ProteinsGENE-EXPRESSION2. Zero hungerazotePHOSPHATE TRANSPORTERAMMONIUM TRANSPORTERSorgan transplantationGeneral Medicinefood shortageMedicago truncatulaArbuscular mycorrhizasymbiose mycorhiziennePopulusfamineEnergy sourceARBUSCULAR MYCORRHIZABiologySULFUR STARVATION03 medical and health sciencesPHOSPHORUS ACQUISITIONSymbiosistransport de nutrimentsBotanySymbiosisGene Expression Profilingblack cottonwoodCell Biologybiology.organism_classificationMEDICAGO-TRUNCATULATransplantationpopulus trichocarpa030104 developmental biologyMembrane biogenesis010606 plant biology & botanytransplantation
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Molecular Responses to Small Regulating Molecules against Huanglongbing Disease

2016

Huanglongbing (HLB; citrus greening) is the most devastating disease of citrus worldwide. No cure is yet available for this disease and infected trees generally decline after several months. Disease management depends on early detection of symptoms and chemical control of insect vectors. In this work, different combinations of organic compounds were tested for the ability to modulate citrus molecular responses to HLB disease beneficially. Three small-molecule regulating compounds were tested: 1) L-arginine, 2) 6-benzyl-adenine combined with gibberellins, and 3) sucrose combined with atrazine. Each treatment contained K-phite mineral solution and was tested at two different concentrations. T…

0106 biological sciences0301 basic medicineSucroseLeavesCitruslcsh:MedicineGene ExpressionSecondary MetabolismPlant ScienceDisaccharidesBiochemistry01 natural sciencesStarchesGene Expression Regulation PlantINFECTIONMedicine and Health SciencesInnatePlant HormonesAmino Acidslcsh:ScienceImmune ResponseGENE-EXPRESSIONMultidisciplinaryNONHOST RESISTANCEbiologyOrganic CompoundsPlant BiochemistryPlant AnatomyChemistryPhenotypeBiochemistryDEFENSE RESPONSESCANDIDATUS-LIBERIBACTER-ASIATICUS; ARABIDOPSIS-THALIANA; NONHOST RESISTANCE; DEFENSE RESPONSES; CITRUS-SINENSIS; GENE-EXPRESSION; INFECTION; PLANTS; IDENTIFICATION; TRANSCRIPTOMEPhysical SciencesHost-Pathogen InteractionsCarbohydrate MetabolismSucrose synthaseAtrazineGibberellinBasic Amino AcidsStarch synthaseSystemic acquired resistanceResearch ArticleCITRUS-SINENSISGeneral Science & TechnologyPhysiologicalImmunologyCarbohydratesCarbohydrate metabolismStressArginine03 medical and health sciencesStress PhysiologicalSettore AGR/07 - Genetica AgrariaGeneticsPLANTSTRANSCRIPTOMESecondary metabolismGenePlant DiseasesIDENTIFICATIONGene Expression Profilinglcsh:ROrganic ChemistryImmunityChemical CompoundsBiology and Life SciencesProteinsPlantBiotic stressCANDIDATUS-LIBERIBACTER-ASIATICUSHormonesGibberellinsImmunity InnateMetabolism030104 developmental biologyGene Expression RegulationARABIDOPSIS-THALIANAbiology.proteinlcsh:Q010606 plant biology & botanyPLOS ONE
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Evaluating responses to temperature during pre-metamorphosis and carry-over effects at post-metamorphosis in the wood tiger moth (Arctia plantaginis)

2019

Insect metamorphosis is one of the most recognized processes delimiting transitions between phenotypes. It has been traditionally postulated as an adaptive process decoupling traits between life stages, allowing evolutionary independence of pre- and post-metamorphic phenotypes. However, the degree of autonomy between these life stages varies depending on the species and has not been studied in detail over multiple traits simultaneously. Here, we reared full-sib larvae of the warningly coloured wood tiger moth ( Arctia plantaginis ) in different temperatures and examined their responses for phenotypic (melanization change, number of moults), gene expression (RNA-seq and qPCR of candidate ge…

0106 biological sciences0301 basic medicinelife-stage autonomymelanizationMothsWARNING SIGNALTrade-off01 natural sciencestäpläsiilikäsGENE-EXPRESSIONmedia_commonPOLYMORPHIC MOTHLarvamuodonvaihdosCOMPLEX LIFE-CYCLES70Metamorphosis BiologicalTemperaturewood tiger mothArticlesPhenotypeREAD ALIGNMENTPupacarry-over effectsTRADE-OFFLarva1181 Ecology evolutionary biologylämpötilaGeneral Agricultural and Biological SciencesResearch Article1001media_common.quotation_subjectZoologyLARVAL COLORBiology010603 evolutionary biologyGeneral Biochemistry Genetics and Molecular Biology03 medical and health sciencesAnimalsMetamorphosisADAPTIVE SIGNIFICANCElife stage autonomyWingTigerEVOLUTION030104 developmental biologyCOLOR PATTERNBasal metabolic ratehyönteisettranscriptomePhilosophical Transactions of the Royal Society B: Biological Sciences
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Involvement of the glutamate receptor AtGLR3.3 in plant defense signaling and resistance toHyaloperonospora arabidopsidis

2013

Like their animal counterparts, plant glutamate receptor-like (GLR) homologs are intimately associated with Ca(2+) influx through plasma membrane and participate in various physiological processes. In pathogen-associated molecular patterns (PAMP)-/elicitor-mediated resistance, Ca(2+) fluxes are necessary for activating downstream signaling events related to plant defense. In this study, oligogalacturonides (OGs), which are endogenous elicitors derived from cell wall degradation, were used to investigate the role of Arabidopsis GLRs in defense signaling. Pharmacological investigations indicated that GLRs are partly involved in free cytosolic [Ca(2+)] ([Ca(2+)]cyt) variations, nitric oxide (N…

0106 biological sciencesArabidopsis thaliana[SDV]Life Sciences [q-bio]ArabidopsisOligosaccharidesPlant Science01 natural sciencesCALCIUM SIGNATURESchemistry.chemical_compoundGene Expression Regulation PlantSYSTEMIC ACQUIRED-RESISTANCEArabidopsisPlant defense against herbivoryArabidopsis thalianaPlant ImmunityGENE-EXPRESSIONCalcium signaling0303 health sciencesIMMUNE-RESPONSESTOBACCO CELLSfood and beveragesCYTOSOLIC CALCIUMElicitorOomycetesReceptors GlutamateBiochemistryHost-Pathogen Interactions[SDE]Environmental SciencesoligogalacturonidesSignal transductionSignal Transductionglutamate receptorHyaloperonospora arabidopsidisBiologyNitric Oxidecalcium signaling03 medical and health sciencesplant defenseGeneticsDNQX[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyBOTRYTIS-CINEREA030304 developmental biologyHyaloperonospora arabidopsidisNITRIC-OXIDEArabidopsis ProteinsCell Biologybiology.organism_classificationSALICYLIC-ACIDchemistryPLASMA-MEMBRANEReactive Oxygen Species010606 plant biology & botanyThe Plant Journal
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Protein actors sustaining arbuscular mycorrhizal symbiosis: underground artists break the silence

2013

'Summary' 26 I. 'Casting for a scenario' 26 II. 'Nominees for a preliminary role' 27 III. 'Nominees for a leading role' 32 IV. 'Future artists' 37   'Acknowledgements' 38   References 38 Summary The roots of most land plants can enter a relationship with soil-borne fungi belonging to the phylum Glomeromycota. This symbiosis with arbuscular mycorrhizal (AM) fungi belongs to the so-called biotrophic interactions, involving the intracellular accommodation of a microorganism by a living plant cell without causing the death of the host. Although profiling technologies have generated an increasing depository of plant and fungal proteins eligible for sustaining AM accommodation and functioning, a …

0106 biological sciencesLASER MICRODISSECTIONPhysiologycarbon (C)phosphorus (P)[SDV]Life Sciences [q-bio]Plant Science01 natural sciencesPlant RootsGlomeromycotaMEDICAGO-TRUNCATULA ROOTSRNA interferenceMycorrhizaeLOTUS-JAPONICUSPlastidsMycorrhizaFUNGUS GLOMUS-INTRARADICESPlant ProteinsGENE-EXPRESSIONGenetics0303 health sciencesGene knockdownFungal proteinPHOSPHATE TRANSPORTERarbuscular mycorrhizaCADMIUM STRESS ALLEVIATIONfood and beveragesSTRIGOLACTONE BIOSYNTHESISArbuscular mycorrhizaEPIDERMAL-CELLSProtein Transportmembranes[SDE]Environmental SciencesSignal TransductionINTRACELLULAR ACCOMMODATIONHyphaeBiologybiotrophyPhosphatesFungal Proteins03 medical and health sciencesSymbiosisBotanyGene silencing[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyGlomeromycotaSymbiosis030304 developmental biologyfungi15. Life on landbiology.organism_classificationCarbonsilencing010606 plant biology & botany
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Plastidial Glyceraldehyde-3-Phosphate Dehydrogenase Deficiency Leads to Altered Root Development and Affects the Sugar and Amino Acid Balance in Arab…

2009

[EN] Glycolysis is a central metabolic pathway that, in plants, occurs in both the cytosol and the plastids. The glycolytic glyceraldehyde-3-phosphate dehydrogenase (GAPDH) catalyzes the conversion of glyceraldehyde-3-phosphate to 1,3-bisphosphoglycerate with concomitant reduction of NAD(+) to NADH. Both cytosolic (GAPCs) and plastidial (GAPCps) GAPDH activities have been described. However, the in vivo functions of the plastidial isoforms remain unresolved. In this work, we have identified two Arabidopsis (Arabidopsis thaliana) chloroplast/plastid-localized GAPDH isoforms (GAPCp1 and GAPCp2). gapcp double mutants display a drastic phenotype of arrested root development, dwarfism, and steri…

0106 biological sciencesPhysiologyDehydrogenaseSerine biosynthesisPlant Science01 natural sciencesSerine03 medical and health scienceschemistry.chemical_compoundBiosynthesisArabidopsisThalianaBIOQUIMICA Y BIOLOGIA MOLECULARGeneticsArabidopsis thalianaGene-expressionGlyceraldehyde 3-phosphate dehydrogenase030304 developmental biology2. Zero hunger0303 health sciencesCrucial rolebiologybiology.organism_classificationIn-source leavesMolecular characterizationMetabolic pathwayMetabolismBiochemistrychemistryOxidative stressbiology.proteinNAD+ kinaseEscherichia-ColiPathway010606 plant biology & botanyPlant Physiology
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Genome sequence of the pea aphid Acyrthosiphon pisum

2010

The genome of the pea aphid shows remarkable levels of gene duplication and equally remarkable gene absences that shed light on aspects of aphid biology, most especially its symbiosis with Buchnera.

0106 biological sciencesTANDEM REPEATSGenome InsectGene TransferRRES175Sequència genòmicaFaculty of Science\Computer ScienceCPG METHYLATION01 natural sciencesGenomeMedical and Health SciencesInternational Aphid Genomics ConsortiumBiologiska vetenskaperBiology (General)GENE-EXPRESSION2. Zero hungerGenetics0303 health sciencesAphidGenomeAfídidsGeneral NeuroscienceGENOME SEQUENCEfood and beveragesDROSOPHILA CIRCADIAN CLOCKBiological SciencesGenetics and Genomics/Microbial Evolution and GenomicsINSECTEGenètica microbianapuceronAPIS-MELLIFERAGeneral Agricultural and Biological SciencesInfectionsymbioseBiotechnologyResearch ArticleVIRUS VECTORING175_GeneticsSYMBIOTIC BACTERIAGene Transfer HorizontalQH301-705.5ACYRTHOSIPHON PISUMBiologyHOLOMETABOLOUS INSECTSHOST-PLANT010603 evolutionary biologyGENOME SEQUENCE;PEA APHID;ACYRTHOSIPHON PISUM;INSECT-PLANT;HOST-PLANT;VIRUS VECTORING;PHENOTYPIC PLASTICITY;HOLOMETABOLOUS INSECTS;INSECTE;RAVAGEUR DES CULTURES; SOCIAL INSECTGeneral Biochemistry Genetics and Molecular BiologyHorizontal03 medical and health sciencesBuchneraPHENOTYPIC PLASTICITYINSECT-PLANTGeneticsGene familyLife ScienceAnimalsSymbiosisGene030304 developmental biologyWhole genome sequencingGeneral Immunology and MicrobiologyAnnotation; Aphid; Genome sequenceAgricultural and Veterinary Sciences175_EntomologyGenètica animalBacteriocytegénomegèneHuman GenomePEA APHIDBiology and Life Sciences15. Life on landbiochemical phenomena metabolism and nutritionbiology.organism_classificationREPETITIVE ELEMENTSDNA-SEQUENCESAcyrthosiphon pisumGenome SequenceGenetics and Genomics/Genome ProjectsRAVAGEUR DES CULTURESAphidsPHEROMONE-BINDINGBuchneraInsectDevelopmental Biology[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosis
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“Pro-youthful” factors in the “labyrinth” of cardiac rejuvenation

2016

IF 3.350; International audience; The mechanisms of aging and senescence include various endogenous and exogenous factors. Among cardiovascular diseases, heart failure is a typical age-related disease. New strategies to restore cardiomyocyte cells have been reported: endogenous substances that can regenerate the heart's cardiomyocytes have been described: follistatin like 1 (FSTL1), growth-differentiation factor 11 (GDF11) and insulin-like growth factor 1 (IGF-I). Manipulation of the different anti and pro-pathways is essential to discover new approaches to regenerative therapies. (C) 2016 Elsevier Inc. All rights reserved.

0301 basic medicineAgingStem-Cellsmedicine.medical_treatmentEndogenyCardiovascular-DiseaseBioinformaticsBiochemistryEndocrinologyFollistatin-Like 1Myocytes CardiacInsulin-Like Growth Factor Ibiology[SDV.MHEP.GEG]Life Sciences [q-bio]/Human health and pathology/Geriatry and gerontologyGrowth differentiation factorGrowth-Factor-I3. Good healthIGF-IGrowth Differentiation FactorsBone Morphogenetic ProteinsCardiacMouse HeartSenescencemedicine.medical_specialtyFollistatin-Related ProteinsGene-Expression[ SDV.MHEP.GEG ] Life Sciences [q-bio]/Human health and pathology/Geriatry and gerontologyFSTL1Mammalian Heart03 medical and health sciencesMyocardial-InfarctionInternal medicineGeneticsmedicineHumansRegenerationRejuvenationMolecular BiologyHeart FailureYoung BloodTelomerase ExpressionRegeneration (biology)Growth factorCell Biologymedicine.disease030104 developmental biologyEndocrinologyHeart failureGDF11GDF11biology.proteinFollistatin
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Cytosine methylation patterns suggest a role of methylation in plastic and adaptive responses to temperature in European grayling (Thymallus thymallu…

2020

Temperature is a key environmental parameter affecting both the phenotypes and distributions of organisms, particularly ectotherms. Rapid organismal responses to thermal environmental changes have been described for several ectotherms; however, the underlying molecular mechanisms often remain unclear. Here, we studied whole genome cytosine methylation patterns of European grayling (Thymallus thymallus) embryos from five populations with contemporary adaptations of early life history traits at either 'colder' or 'warmer' spawning grounds. We reared fish embryos in a common garden experiment using two temperatures that resembled the 'colder' and 'warmer' conditions of the natal natural enviro…

0301 basic medicineCancer ResearchDATABASEsalmonidPopulationCytosine methylationSNPepigenetic variationCytosine03 medical and health sciences0302 clinical medicineINTRAGENIC DNA METHYLATIONthermal adaptationPHENOTYPIC PLASTICITYAnimalsADAPTATIONeducationMolecular BiologyGENE-EXPRESSIONLocal adaptationeducation.field_of_studyPhenotypic plasticitypromoterCLIMATE-CHANGEbiologyTemperatureGenetic VariationDNA Methylationbiology.organism_classificationThymallusEVOLUTIONEuropean graylingINSIGHTS030104 developmental biologyCpG siteEvolutionary biologydevelopmental plasticity030220 oncology & carcinogenesisEctotherm1181 Ecology evolutionary biologyDNA methylationTHERMAL PLASTICITYtranscriptionSalmonidaeResearch PaperEpigenetics
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