Search results for "Genetic Speciation"

showing 10 items of 40 documents

Genomics of speciation and introgression in Princess cichlid fishes from Lake Tanganyika.

2016

How variation in the genome translates into biological diversity and new species originate has endured as the mystery of mysteries in evolutionary biology. African cichlid fishes are prime model systems to address speciation-related questions for their remarkable taxonomic and phenotypic diversity, and the possible role of gene flow in this process. Here, we capitalize on genome sequencing and phylogenomic analyses to address the relative impacts of incomplete lineage sorting, introgression and hybrid speciation in the Neolamprologus savoryi-complex (the 'Princess cichlids') from Lake Tanganyika. We present a time-calibrated species tree based on whole-genome sequences and provide strong ev…

0301 basic medicineGenetic SpeciationIntrogressionGenomicsBiologyTanzaniaNucleotide diversityCoalescent theory03 medical and health sciencesCichlidGeneticsAnimalsEcology Evolution Behavior and SystematicsGeneticsGenomeCichlidsGenomicsbiology.organism_classificationLakes030104 developmental biologyGenetic SpeciationPhenotypeEvolutionary biologyHybrid speciationNeolamprologushuman activitiesMolecular ecology
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Evolution of the immune system influences speciation rates in teleost fishes.

2016

Teleost fishes constitute the most species-rich vertebrate clade and exhibit extensive genetic and phenotypic variation, including diverse immune defense strategies. The genomic basis of a particularly aberrant strategy is exemplified by Atlantic cod, in which a loss of major histocompatibility complex (MHC) II functionality coincides with a marked expansion of MHC I genes. Through low-coverage genome sequencing (9–39×), assembly and comparative analyses for 66 teleost species, we show here that MHC II is missing in the entire Gadiformes lineage and thus was lost once in their common ancestor. In contrast, we find that MHC I gene expansions have occurred multiple times, both inside and outs…

0301 basic medicineGenetic SpeciationLineage (evolution)Adaptation BiologicalGene Dosagechemical and pharmacologic phenomenaMajor histocompatibility complexMajor Histocompatibility Complex03 medical and health sciencesSpecies Specificitybiology.animalMHC class IGeneticsAnimals14. Life underwaterCladePhylogenyGeneticsGenomebiologyFishesVertebrateAcquired immune systemBiological Evolution030104 developmental biologyGenetic SpeciationImmune Systembiology.proteinAdaptationNature genetics
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The evolution of the Cercopithecini: a (post)modern synthesis.

2017

The Cercopithecini, or African guenon monkeys, are one of the most diverse clades of living primates and comprise the most species-rich clade of Catarrhini. Species identity is announced by flamboyant coloration of the facial and genital regions and, more cryptically, by vigorous chromosomal rearrangements among taxa. Beneath the skin, however, these animals are skeletally conservative and show low levels of genetic sequence divergence consonant with recent divergence between congeneric species. The guenons clearly demonstrate that morphological, cytogenetic, and reproductive differentiation proceed at different rates during speciation. We review diverse kinds of data in an effort to unders…

0301 basic medicineMaleGenetic SpeciationCatarrhiniSettore BIO/08 - AntropologiaAnthropology PhysicalEvolution Molecular03 medical and health sciencesCercopithecinaeGenetic algorithmAnimalsCladePhylogenyCercopithecinibiologyBehavior AnimalSkullCercopithecoidea Chromosomes Fissioning Guenons PhylogenyGeneral Medicinebiology.organism_classificationGuenonBiological Evolution030104 developmental biologyTaxonEvolutionary biologyAnthropologyAfricaFemaleEvolutionary anthropology
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No pre-zygotic isolation mechanisms between Schistosoma haematobium and Schistosoma bovis parasites: From mating interactions to differential gene ex…

2021

Species usually develop reproductive isolation mechanisms allowing them to avoid interbreeding. These preventive barriers can act before reproduction, “pre-zygotic barriers”, or after reproduction, “post-zygotic barriers”. Pre-zygotic barriers prevent unfavourable mating, while post-zygotic barriers determine the viability and selective success of the hybrid offspring. Hybridization in parasites and the underlying reproductive isolation mechanisms maintaining their genetic integrity have been overlooked. Using an integrated approach this work aims to quantify the relative importance of pre-zygotic barriers in Schistosoma haematobium x S. bovis crosses. These two co-endemic species cause sch…

0301 basic medicineMaleIntrogressionRC955-962Gene ExpressionBiochemistryTransmembrane Transport Proteins0302 clinical medicineMedical ConditionsCricetinaeArctic medicine. Tropical medicineMedicine and Health SciencesMatingSchistosoma haematobiumGeneticsMammalsbiologyMosaicism[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]ReproductionEukaryotaReproductive isolationGenomicsInfectious DiseasesMate choiceVertebratesHamstersSchistosomaFemalePublic aspects of medicineRA1-1270Transcriptome AnalysisResearch ArticleEvolutionary ProcessesReproductive IsolationGenetic Speciation030231 tropical medicineIntrogressionRodents03 medical and health sciencesHelminthsGeneticsParasitic DiseasesAnimalsGeneSchistosomaEvolutionary BiologyHost (biology)Public Health Environmental and Occupational HealthOrganismsBiology and Life SciencesComputational BiologyProteinsbiology.organism_classificationGenome AnalysisInvertebratesSchistosoma Haematobium030104 developmental biologyGene Expression RegulationAmniotesZoologyPLoS Neglected Tropical Diseases
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Reciprocal hybridization at different times between Senecio flavus and Senecio glaucus gave rise to two polyploid species in north Africa and south‐w…

2006

Summary • The analysis of hybrid plant taxa using molecular methods has considerably extended understanding of possible pathways of hybrid evolution. • Here, we investigated the origin of the tetraploid Senecio mohavensis ssp. breviflorus and the hexaploid Senecio hoggariensis by sequencing of nuclear and chloroplast DNA, and by analysis of the distribution of taxon-specific amplified fragment length polymorphism (AFLP) fragments. • Both taxa originated from hybridization between the diploid Senecio flavus and Senecio glaucus. Whereas S. glaucus was the female parent in the origin of S. mohavensis ssp. breviflorus, S. flavus was the female parent in the origin of S. hoggariensis. • The dist…

AsiaDNA PlantbiologyGenetic SpeciationPhysiologyfungifood and beveragesIntrogressionPlant ScienceSeneciobiology.organism_classificationSenecio glaucusPolyploidyChloroplast DNAPolyploidAfricaBotanyHybridization GeneticDNA IntergenicSenecioAmplified fragment length polymorphismPloidySenecio mohavensisPhylogenyNew Phytologist
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Temporal speciation pattern in the western Mediterranean genus Tudorella P. Fischer, 1885 (Gastropoda, Pomatiidae) supports the Tyrrhenian vicariance…

2009

The land snail genus Tudorella shows a peculiar disjunct distribution around the western Mediterranean coasts. Despite high phenotypic plasticity, only two species with a disputed number of subspecific taxa are currently recognised. We delimited the species with mitochondrial (COI & 16S) and nuclear (ITS-1) markers based on the unified species concept and suggested that there are eight species in the genus, two of them currently undescribed. Applying Bayesian phylogenetic model selection, we tested four different biogeographic hypotheses that could be causal for the current distribution pattern of extant Tudorella species. A scenario involving vicariance events resulting from the repeated s…

Cell NucleusPhylogenetic treeGeographyModels GeneticLand bridgeEcologyGenetic SpeciationMediterranean RegionSnailsDisjunct distributionLand snailBayes TheoremSequence Analysis DNABiologyDNA MitochondrialEvolution MolecularTaxonGenusGeneticsVicarianceBiological dispersalAnimalsMolecular BiologyEcology Evolution Behavior and SystematicsPhylogenyMolecular phylogenetics and evolution
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Genomic determinants of speciation and spread of the Mycobacterium tuberculosis complex

2019

14 páginas, 6 figuras

Datasets as TopicGene ExpressionBacterial lineagesPopulation genomicsNegative selectionMUTATIONPathogenSensor kinaseResearch ArticlesHistory AncientPhylogenyRecombination Genetic0303 health sciencesMultidisciplinaryHYPOTHESIS1184 Genetics developmental biology physiologySciAdv r-articlesLINEAGE3. Good healthPast and presentPositive selectionMycobacterium tuberculosis complexHost-Pathogen InteractionsTwo component systemsResearch ArticleLineage (genetic)Genetic SpeciationVirulence FactorsVirulenceBiologyMicrobiologyHistory 21st CenturyRecombination eventsMycobacterium03 medical and health sciencesBacterial ProteinsGenetic algorithmGeneticsHumansTuberculosisSelection GeneticGene030304 developmental biologyGenetic locus030306 microbiologyMycobacterium tuberculosis complexesMycobacterium tuberculosisbiology.organism_classificationEVOLUTIONGenetic SpeciationGenetic LociEvolutionary biologyVIRULENCEAdaptationGenome BacterialRESISTANCE
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Adaptation and ecological speciation in seasonally varying environments at high latitudes: Drosophila virilis group

2022

Living in high latitudes and altitudes sets specific requirements on species’ ability to forecast seasonal changes and to respond to them in an appropriate way. Adaptation into diverse environmental conditions can also lead to ecological speciation through habitat isolation or by inducing changes in traits that influence assortative mating. In this review, we explain how the unique time-measuring systems of Drosophila virilis group species have enabled the species to occupy high latitudes and how the traits involved in species reproduction and survival exhibit strong linkage with latitudinally varying photoperiodic and climatic conditions. We also describe variation in reproductive barriers…

Drosophila virilis groupReproductive IsolationmahlakärpäsetGenetic SpeciationLocal adaptationPhotoperiodreproductive diapauseReviewkylmänkestävyysphotoperiodic timerchromosomal inversionscircadian clockilmastoelinympäristöAnimalsmuuntelu (biologia)lepotilavuorokausirytmisopeutuminenvuodenajatkromosomi-inversiotReproductioncold tolerancelisääntyminenAdaptation Physiologicalgenome sequencingInsect SciencelajiutuminenDrosophilacandidate genesreproductive barrierslocal adaptationFly
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Niche filling slows the diversification of Himalayan songbirds.

2013

In Himalayan songbirds, the speciation rate is ultimately set by ecological competition, rather than by the rate of acquisition of reproductive isolation. The beginnings of adaptive radiation and speciation have been widely studied — in Darwin's finches, sticklebacks and cichlid fish, for example — but relatively little is known about what happens next. Specifically, what is the rate-limiting step for the establishment of new species? This seven-year study of the 358 songbird species found on the Himalayan slopes suggests that it is the rates at which new niches are created and occupied that limits diversification, not the rate at which new species form through reproductive isolation. Speci…

Ecological nicheChinaMultidisciplinaryEcologyRange (biology)Genetic Speciationmedia_common.quotation_subjectAltitudeReproductionIndiaReproductive isolationBiologyTibetCompetition (biology)Ecological speciationSongbirdsAdaptive radiationGenetic algorithmCharacter displacementAnimalsBody SizeEcosystemPhylogenymedia_commonNature
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On the complexity of the Saccharomyces bayanus taxon: Hybridization and potential hybrid speciation

2014

Although the genus Saccharomyces has been thoroughly studied, some species in the genus has not yet been accurately resolved; an example is S. bayanus, a taxon that includes genetically diverse lineages of pure and hybrid strains. This diversity makes the assignation and classification of strains belonging to this species unclear and controversial. They have been subdivided by some authors into two varieties (bayanus and uvarum), which have been raised to the species level by others. In this work, we evaluate the complexity of 46 different strains included in the S. bayanus taxon by means of PCR-RFLP analysis and by sequencing of 34 gene regions and one mitochondrial gene. Using the sequenc…

Evolutionary GeneticsSaccharomyces bayanusDIVERSITYSequence Homologylcsh:MedicineSaccharomycesPolymerase Chain Reaction//purl.org/becyt/ford/1 [https]Genética y HerenciaPCR-RFLP analysisFungal EvolutionCluster Analysislcsh:ScienceGenome EvolutionPhylogenyGeneticsMultidisciplinarySACCHAROMYCES EUBAYANUSPhylogenetic analysisbiologyStrain (biology)Systems BiologyGenomicsS. bayanusPolymorphism Restriction Fragment LengthCIENCIAS NATURALES Y EXACTASResearch ArticleEvolutionary ProcessesGenetic SpeciationMolecular Sequence DataIntrogressionMycologyGenome ComplexityMicrobiologyGenètica molecularCiencias BiológicasSaccharomycesSpecies SpecificityPhylogeneticsGenetic variationGeneticsYEAST//purl.org/becyt/ford/1.6 [https]HybridizationAllelesHybridEvolutionary BiologyBase Sequencelcsh:ROrganismsFungiBiology and Life SciencesComputational BiologyGenetic VariationSACCHAROMYCES PASTORIANUSSequence Analysis DNAComparative Genomicsbiology.organism_classificationYeastGenetics PopulationHaplotypesFungal ClassificationHybridization GeneticHybrid speciationlcsh:Q
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