Search results for "Genetic algorithm"

GenClust: A genetic algorithm for clustering gene expression data

2005

Abstract Background Clustering is a key step in the analysis of gene expression data, and in fact, many classical clustering algorithms are used, or more innovative ones have been designed and validated for the task. Despite the widespread use of artificial intelligence techniques in bioinformatics and, more generally, data analysis, there are very few clustering algorithms based on the genetic paradigm, yet that paradigm has great potential in finding good heuristic solutions to a difficult optimization problem such as clustering. Results GenClust is a new genetic algorithm for clustering gene expression data. It has two key features: (a) a novel coding of the search space that is simple, …

Genome-wide detection of signatures of selection in three Valdostana cattle populations

2020

International audience; The Valdostana is a local dual purpose cattle breed developed in Italy. Three populations are recognized within this breed, based on coat colour, production level, morphology and temperament: Valdostana Red Pied (VPR), Valdostana Black Pied (VPN) and Valdostana Chestnut (VCA). Here, we investigated putative genomic regions under selection among these three populations using the Bovine 50K SNP array by combining three different statistical methods based either on allele frequencies (F-ST) or extended haplotype homozygosity (iHS and Rsb). In total, 8, 5 and 8 chromosomes harbouring 13, 13 and 16 genomic regions potentially under selection were identified by at least tw…

1993

Genetics and developmental genetics have given us such a wealth of new insight that, at the end of this century, the synthetic theory can no longer be maintained in the strict “orthodox” sense in which it was started.

The metaphorical species: Evolution, adaptation and speciation of metaphors

2015

Studying cartoons about the economic crisis and focusing on a pair of scissors as a symbol, I prove how they first turn into unambiguous metaphor for the economic crisis and then experience an evolution in order to adapt to new communication contexts. Along these processes, they undergo more complex changes such as coadaptation and speciation. This has allowed for the scissors meme as a symbol of economic cutbacks to permeate society, and for its metaphorical use to occupy many disparate communication scenarios, unlike other symbolic elements that were also used, but turned out to be less cognitively efficient and therefore offered fewer evolutionary possibilities.

Selection in captive populations

1986

We have briefly reviewed types of genetic variation and selection in the wild as contrasted with selection in captive populations, along with the objectives of captive breeding programs, before recommending selection procedures for the genetic management of captive populations. Although some inadvertent selection for tameness and adaptation to captive environments is inevitable in captive populations, any selection that is actively applied to captive populations should have clearly defined objectives. Much of the apparent disagreement about genetic management of captive populations probably stems from the varying objectives of different captive breeding programs. Objectives differ depending…

Using Redundant Visual Information From Different Dimensions for Attentional Selection

2012

The present study investigated the use of redundant information for attentional selection of a visual object. Each display contained two overlapping objects, and participants had to report the color of the occluding object. A baseline condition did not require object selection because the objects were identical. A single-cue condition required object selection based on spatial arrangement (i.e., occlusion) because the objects had the same shape. A double-cue condition afforded object selection by occlusion and shape because the objects consistently differed in shape. Behavioral results showed that the redundant shape cue facilitated attentional selection, although participants were never s…

Role of Symbiosis in Evolution

2013

The biological relevance of the widespread prokaryote–eukaryote symbioses as a source of evolutionary innovation has been unveiled by the advent of the Genomic era, allowing deep knowledge on single or consortia uncultivable species. The establishment and maintenance of symbiosis are complex issues where partners’ fitness determines the evolutionary outcome. Comparative genomics allows to dissect the evolutionary process that begins with host invasion, takes the path from facultative to obligate symbiosis, and ends up in replacement or coexistence with new bacterial symbionts. Whole genomes of several intracellular bacterial symbionts have been sequenced, allowing the comparison among the d…

Mate choice for indirect genetic benefits: scrutiny of the current paradigm

2007

Summary 1Sexual selection through mate choice, and in particular female choice for indirect fitness benefits for their offspring, is a major paradigm that currently seems to enjoy almost unequivocal acceptance. A large body of theoretical work has been built to explain the evolution of mate choice in the absence of direct benefits, and the empiricists have enthusiastically verified the various assumptions and predictions of the theory. 2However, the relative importance of mate choice for indirect benefits in comparison to choice for direct benefits or to other mechanisms of sexual selection such as male–male competition or sensory exploitation remains a controversial issue, and this seems t…

On optimal deployment of low power nodes for high frequency next generation wireless systems

2018

Recent development of wireless communication systems and standards is characterized by constant increase of allocated spectrum resources. Since lower frequency ranges cannot provide sufficient amount of bandwidth, new bands are allocated at higher frequencies, for which operators resort to deploy more base stations to ensure the same coverage and to utilize more efficiently higher frequencies spectrum. Striving for deployment flexibility, mobile operators can consider deploying low power nodes that could be either small cells connected via the wired backhaul or relays that utilize the same spectrum and the wireless access technology. However, even though low power nodes provide a greater fl…

Default effects in app selection: German adolescents’ tendency to adhere to privacy or social relatedness features in smartphone apps

2019

Cognitive biases such as default effects impact on user preferences for a broad range of different choices. This paper investigates these default effects among adolescents configuring apps that either satisfy relatedness or enhance autonomy by protecting privacy. Relatedness and privacy are two innate needs that adolescents can satisfy with the use of smartphone apps. This study argues that adolescents’ choice of features supporting either privacy protection or social relatedness is a consequence of default effects, so that adolescents adhere to preselected defaults. We test this assumption in an experimental survey design including four app configuration tasks with N = 280 German adolesce…