Search results for "Gigantea"

showing 10 items of 21 documents

An improved understanding of the Alaska Coastal Current: the application of a bivalve growth-temperature model to reconstruct freshwater-influenced p…

2011

Shells of intertidal bivalve mollusks contain sub-seasonally to interannually resolved records of temperature and salinity variations in coastal settings. Such data are essential to understand changing land-sea interactions through time, specifically atmospheric (precipitation rate, glacial meltwater, river discharge) and oceanographic circulation patterns; however, independent temperature and salinity proxies are currently not available. We established a model for reconstructing daily water temperatures with an average standard error of ∼1.3 °C based on variations in the width of lunar daily growth increments of Saxidomus gigantea from southwestern Alaska, United States. Temperature explai…

010504 meteorology & atmospheric sciencesbiologyDischargeTemperature salinity diagramsPaleontologyIntertidal zone010502 geochemistry & geophysicsbiology.organism_classification01 natural sciencesSaxidomus giganteaSalinityOceanography13. Climate action[SDE]Environmental SciencesSeawater14. Life underwaterGlacial periodMeltwaterEcology Evolution Behavior and SystematicsGeologyComputingMilieux_MISCELLANEOUS0105 earth and related environmental sciences
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Holocene climate and seasonality of shell collection at the Dundas Islands Group, northern British Columbia, Canada—A bivalve sclerochronological app…

2013

article i nfo To analyze environmental changes and the seasonality of shell collection in British Columbia during the Ho- locene, oxygen isotopes were measured from modern and archeological (1337-7438 cal yr BP) shells of the butter clam Saxidomus gigantea. 1697 discrete isotope samples were taken from two modern and 27 arche- ological shells with a high temporal resolution (sub-seasonal up to daily). Archeological shells were collected from five shell midden sites on the Dundas Islands Group, northern British Columbia, Canada. The oxygen iso- tope data reveal clear annual cycles, with the most positive δ 18 Oshell values occurring during the cold season (slower growth, annual growth line f…

010506 paleontology010504 meteorology & atmospheric sciencesTemperature salinity diagramsOceanography01 natural sciencesIsotopes of oxygenmedicine14. Life underwaterEcology Evolution Behavior and SystematicsHoloceneComputingMilieux_MISCELLANEOUS0105 earth and related environmental sciencesEarth-Surface ProcessesbiologyPaleontologySeasonalitymedicine.diseasebiology.organism_classificationSaxidomus giganteaMiddenSalinityOceanography13. Climate action[SDE]Environmental SciencesPeriod (geology)Geology
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Inter-site variability in the season of shellfish collection on the central coast of British Columbia

2013

High-resolution stable oxygen isotope analysis of the bivalve Saxidomus gigantea from shell midden sites was applied to identify seasonal patterns of resource procurement on the central coast of British Columbia, Canada. A total of 90 archaeological shells were examined from eight distinct sites spanning a 4500-year period. Combining micro-growth pattern analysis with high-resolution stable oxygen isotope sampling allows for a precise season of collection to be determined in estuarine bivalves recovered from archaeological sites. The results of the stable oxygen isotope analysis provide insights into seasonally structured harvest of S. gigantea (butter clam), which is associated with differ…

010506 paleontologyArcheology01 natural sciencesIsotopes of oxygenSclerochronologymedicine0601 history and archaeology14. Life underwaterComputingMilieux_MISCELLANEOUSShellfish0105 earth and related environmental sciencesgeographygeography.geographical_feature_category060102 archaeologybiologyEstuary06 humanities and the artsSeasonalitymedicine.diseasebiology.organism_classificationSaxidomus giganteaMiddenFisheryOceanography[SDE]Environmental SciencesPeriod (geology)GeologyJournal of Archaeological Science
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REFINING ESTIMATES FOR THE SEASON OF SHELLFISH COLLECTION ON THE PACIFIC NORTHWEST COAST: APPLYING HIGH-RESOLUTION STABLE OXYGEN ISOTOPE ANALYSIS AND…

2012

Stable oxygen isotopes from estuarine bivalve carbonate from Saxidomus gigantea were analysed combined with high-resolution sclerochronology from modern and archaeological shells from British Columbia, Canada, to determine the seasonality of shellfish collection from the archaeological site of Namu. The combination of high-resolution sclerochronology and a micro-milled sampling strategy for δ18O analysis permits a precise estimate of archaeological seasonality, because seasonal freshwater influxes and changes in temperature have dual effects on the δ18O value of the shell. Sclerochronological analysis identifies the timing and duration of growth that is temporally aligned to stable oxygen i…

010506 paleontologyArcheologyHistorygeographygeography.geographical_feature_category060102 archaeologybiologyδ18OEstuary06 humanities and the artsSeasonalitybiology.organism_classificationmedicine.disease01 natural sciencesSaxidomus giganteaIsotopes of oxygenOceanographySclerochronologymedicine0601 history and archaeology14. Life underwaterShellfishHoloceneGeology0105 earth and related environmental sciencesArchaeometry
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High-resolution sclerochronological analysis of the bivalve mollusk Saxidomus gigantea from Alaska and British Columbia: techniques for revealing env…

2009

Abstract The butter clam, Saxidomus gigantea , is one of the most commonly recovered bivalves from archaeological shell middens on the Pacific Coast of North America. This study presents the results of the sclerochronology of modern specimens of S. gigantea , collected monthly from Pender Island (British Columbia), and additional modern specimens from the Dundas Islands (BC) and Mink and Little Takli Islands (Alaska). The methods presented can be used as a template to interpret local environmental conditions and increase the precision of seasonality estimates in shellfish using sclerochronology and oxygen isotope analysis. This method can also identify, with a high degree of accuracy, the d…

010506 paleontologyArcheologygeographygeography.geographical_feature_categorybiologyGrowing seasonGiganteaEstuarySeasonality010502 geochemistry & geophysicsmedicine.diseasebiology.organism_classification01 natural sciencesArchaeologySaxidomus giganteaOceanographySclerochronology[SDE]Environmental SciencesPaleoecologymedicine14. Life underwaterComputingMilieux_MISCELLANEOUS0105 earth and related environmental sciencesIsotope analysisJournal of Archaeological Science
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Daily rhythmicity of high affinity copper transport

2016

A differential demand for copper (Cu) of essential cupro-proteins that act within the mitochondrial and chloroplastal electronic transport chains occurs along the daily light/dark cycles. This requires a fine-tuned spatiotemporal regulation of Cu delivery, becoming especially relevant under non-optimal growth conditions. When scarce, Cu is imported through plasma membrane-bound high affinity Cu transporters (COPTs) whose coding genes are transcriptionally induced by the SPL7 transcription factor. Temporal homeostatic mechanisms are evidenced by the presence of multiple light- and clock-responsive regulatory cis elements in the promoters of both SPL7 and its COPT targets. A model is presente…

0106 biological sciences0301 basic medicineCircadian clockArabidopsisComputingMilieux_LEGALASPECTSOFCOMPUTINGPlant Science01 natural sciencesElectron Transport03 medical and health sciencesGene Expression Regulation PlantArabidopsisBotanyRNA MessengerSLC31 ProteinsPromoter Regions GeneticCation Transport ProteinsTranscription factorbiologyArabidopsis ProteinsGiganteaTransporterPromoterbiology.organism_classificationElectron transport chainArticle AddendumCircadian RhythmTransport proteinDNA-Binding Proteins030104 developmental biologyBiophysicsCopperMetabolic Networks and PathwaysTranscription Factors010606 plant biology & botanyPlant Signaling & Behavior
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Modulation of copper deficiency responses by diurnal and circadian rhythms in Arabidopsis thaliana

2015

Highlight Cyclic expression of copper transport and the responses to copper deficiency are integrated into the light and circadian–oscillator signalling in plants.

0106 biological sciencescopper deficiencyArabidopsis thalianaPhysiologyPeriod (gene)Circadian clockArabidopsischemistry.chemical_elementPlant Science01 natural sciencesdiurnal rhythm03 medical and health sciencesGene Expression Regulation Plantcircadian clockmedicineArabidopsis thalianaHomeostasisCircadian rhythmSLC31 Proteinsheavy metalsTranscription factorCation Transport Proteins030304 developmental biologyGeneticsheavy metals.0303 health sciencesbiologyArabidopsis ProteinsSuperoxide DismutaseGiganteafood and beveragesbiology.organism_classificationmedicine.diseasePlants Genetically ModifiedCopperCell biologyCircadian RhythmDNA-Binding Proteinschemistrycopper transportCopper deficiencyCopper010606 plant biology & botanyResearch PaperTranscription Factors
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Screening of novel plants for biogas production in northern conditions.

2013

Abstract The objective of this study was to screen nine annual or perennial novel plants for biogas production cultivated in years 2007–2010 in Finland. The most promising novel plants for biogas production were found to be brown knapweed, giant goldenrod and Japanese millet producing 14–27 t total solids/ha and 4000–6100 Nm 3  CH 4 /ha. The specific methane yields of all studied plants varied from 170 to 381 Nm 3  CH 4 /t volatile solids (VS), depending on harvest time and plant species. Co-digestion of brown knapweed with cow manure in continuously stirred tank reactor was investigated and the highest methane yield was 254 NL CH 4 /kg VS, when the share of brown knapweed was 50% in the fe…

Environmental EngineeringPerennial plantta1172BiomassBioengineeringMethanechemistry.chemical_compoundBioreactorsBiogasBioenergyAnimalsBiomassFertilizersWaste Management and DisposalFinlandbiologyRenewable Energy Sustainability and the EnvironmentGeneral MedicinePlantsbiology.organism_classificationTotal dissolved solidsSolidago giganteaManureAgronomychemistryBiofuelsEnvironmental scienceCattleVolatilizationCow dungMethaneBioresource technology
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The shell-forming proteome of Lottia gigantea reveals both deep conservations and lineage-specific novelties

2013

19 pages; International audience; Proteins that are occluded within the molluscan shell, the so-called shell matrix proteins (SMPs), are an assemblage of biomolecules attractive to study for several reasons. They increase the fracture resistance of the shell by several orders of magnitude, determine the polymorph of CaCO(3) deposited, and regulate crystal nucleation, growth initiation and termination. In addition, they are thought to control the shell microstructures. Understanding how these proteins have evolved is also likely to provide deep insight into events that supported the diversification and expansion of metazoan life during the Cambrian radiation 543 million years ago. Here, we p…

Glycoside Hydrolasesmedicine.medical_treatmentproteomeGastropodaMolecular Sequence DataBiologyBiochemistrymollusc shell matrix proteinsTranscriptomeCyclophilins03 medical and health sciencesPaleontologyLineage specificAnimal ShellsSequence Analysis ProteinTandem Mass Spectrometry[SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN]evolutionmedicineAnimalsAmino Acid Sequence14. Life underwaterMantle (mollusc)[SDV.IB.BIO]Life Sciences [q-bio]/Bioengineering/BiomaterialsMolecular BiologyCarbonic Anhydrases030304 developmental biologyExtracellular Matrix Proteins0303 health sciencesProteaseEpidermal Growth FactorSequence Homology Amino AcidLimpet030302 biochemistry & molecular biologyCell Biologybiology.organism_classification[ SDV.IB.BIO ] Life Sciences [q-bio]/Bioengineering/BiomaterialsbiomineralizationPeptide FragmentsProtein Structure TertiaryPeroxidasesEvolutionary biology[ SDV.BBM.GTP ] Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN]ProteomeLottia giganteaElectrophoresis Polyacrylamide GelmantleBiomineralization
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Data from: Phylogenomics of Lophotrochozoa with consideration of systematic error

2021

Phylogenomic studies have improved understanding of deep metazoan phylogeny and show promise for resolving incongruences among analyses based on limited numbers of loci. One region of the animal tree that has been especially difficult to resolve, even with phylogenomic approaches, is relationships within Lophotrochozoa (the animal clade that includes molluscs, annelids, and flatworms among others). Lack of resolution in phylogenomic analyses could be due to insufficient phylogenetic signal, limitations in taxon and/or gene sampling, or systematic error. Here, we investigated why lophotrochozoan phylogeny has been such a difficult question to answer by identifying and reducing sources of sys…

Helobdella robustaGlycera dibranchiataMytilus edulisAnnelidaEntalina tetragonaLeptochiton asellusCerebratulus marginatusLoxosomella cf. viviparaGraptacme eboreaLineus longissimusmedicine and health careClymenella torquataRuditapes philippinarumNucella lapillusHaliotis rufescenslong branch attractionPlatyzoaBarentsia gracilisPriapulus caudatusLineus ruberAlitta virenssaturationProchaetoderma californicumLife SciencesPinctada fucataSchistosoma mansoniPolyzoaCephalothrix hongkongensisRhyssoplax olivaceusLoxosoma pectinaricolaPhascolosoma agassiziiAdineta vagaDrosophila melanogasterEntoproctaBugula neritinaPhoronis vancouverensisMedicineNovocrania anomalaVillosa lienosaDaphnia pulexSagitta sp.Pectinaria gouldiiSymbion americanusNuculana pernulaSepia esculentaEnucula tenuisSolemya velumLineus lacteusTubulanus polymorphus-StruckGnathostomula paradoxaBoccardia proboscideaMacellomenia schanderiLaevipilina hyalinaTubulanus polymorphus-HalanychBryozoaPomatoceros lamarckiiSepioteuthis lessonianaParanemertes peregrinaMalacobdella grossaHemithiris psittaceaLeptochiton rugatusTrochozoaBrachionus plicatilisSpathoderma clenchiLaqueus californicusPatella vulgataLottia giganteaCrepidula fornicataPhoronidaAplysia californicaGlottidia pyramidataPhoronis psammophilaSchmidtea mediterraneaAlexandromenia crassaBrachiopodaMegadasys sp.Octopus vulgarisCapitella teletaNeomenia carinatacompositional heterogeneityNemerteaPhenacolepas pulchellaGadila tolmieiMolluscaMacrodasys sp.Crassostrea gigasPedicellina cernuaTaenia pisiformisDosidicus gigasCephalothrix linearisSpiralia
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