Search results for "Halophile"

showing 10 items of 35 documents

Thalassobacter stenotrophicus gen. nov., sp. nov., a novel marine alpha-proteobacterium isolated from Mediterranean sea water.

2005

A Gram-negative, slightly halophilic, strictly aerobic, chemo-organotrophic bacterium was isolated from Mediterranean sea water near Valencia (Spain). 16S rRNA gene sequence comparisons showed that the isolate represented a separate branch within the α-3 subclass of the Proteobacteria, now included within the order ‘Rhodobacterales’. Jannaschia helgolandensis was the closest relative, but their low sequence similarity and other features indicated that they were not related at the genus level. Isolate 5SM22T produced bacteriochlorophyll a and grew on solid media as regular salmon-pink colonies. Cells are motile rods, with polar flagella. The DNA G+C content is 59·1 mol%. Morphological, physi…

DNA BacterialMolecular Sequence DataMicrobiologyDNA RibosomalMediterranean seaGenusRNA Ribosomal 16SBotanyMediterranean SeaSeawaterRhodobacteraceaeEcology Evolution Behavior and SystematicsPhylogenybiologyGenes rRNAGeneral MedicineBacteriochlorophyll ASequence Analysis DNAbiology.organism_classification16S ribosomal RNAHalophileCulture MediaRhodobacteralesPhenotypeSpainTaxonomy (biology)ProteobacteriaBacteriaInternational journal of systematic and evolutionary microbiology
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Halorhabdus rudnickae sp. nov., a halophilic archaeon isolated from a salt mine borehole in Poland

2016

Two halophilic archaea, designated strains WSM-64 and WSM-66, were isolated from a sample taken from a borehole in the currently unexploited Barycz mining area belonging to the >Wieliczka> Salt Mine Company, in Poland. Strains are red pigmented and form non-motile cocci that stain Gram-negative. Strains WSM-64 and WSM-66 showed optimum growth at 40 °C, in 20% NaCl and at pH 6.5-7.5. The strains were facultative anaerobes. The major polar lipids of the two strains were phosphatidylglycerol (PG2), phosphatidylglycerol phosphate methyl ester (PGP-Me) and sulfated diglycosyl diether (S-DGD). Menaquinone MK-8 was the major respiratory quinone. The DNA G+C content of strain WSM-64 was 61.2 mol% b…

0301 basic medicineGeologic Sediments030106 microbiologyBiologyApplied Microbiology and BiotechnologyMicrobiologyGenomeDNA sequencingMicrobiology03 medical and health scienceschemistry.chemical_compoundBotanyEcology Evolution Behavior and SystematicsPhosphatidylglycerolHalobacteriaceaeStrain (chemistry)HaloarchaeaHalorhabdus rudnickae sp. novHalorhabdus16S ribosomal RNAbiology.organism_classificationHalophileBacterial Typing TechniqueschemistryPolandDNAArchaeaSystematic and Applied Microbiology
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Marinomonas spartinae sp. nov., a novel species with plant-beneficial properties.

2016

Two strains of Gram-stain-negative, chemo-organotrophic, aerobic and halophilic gammaproteobacteria, isolated from within the stem and roots of Spartina maritima in salt marshes from the south Atlantic Spanish coast, were found to represent a novel species in the genus Marinomonas through phylogenetic analysis of their 16S rRNA genes and phenotypic characterization. 16S rRNA gene sequences of the two strains shared < 96.2 % similarity with other Marinomonas species, with Marimonas alcarazii being the most similar in sequence. They required sodium ions for growth, were able to thrive at low (4 °C) temperatures and at salinities of 12–15 %, were unable to hydrolyse any tested macromolecule ex…

0301 basic medicineDNA BacterialMarinomonasMolecular Sequence DataBiologyPoaceaeMicrobiologyPlant Roots03 medical and health sciencesRNA Ribosomal 16SGammaproteobacteriaBotanyEndophytesSugarMarinomonasEcology Evolution Behavior and SystematicsPhylogenychemistry.chemical_classificationBase CompositionPhylogenetic treePlant StemsFatty AcidsNucleic Acid HybridizationGeneral MedicineSequence Analysis DNA16S ribosomal RNAbiology.organism_classificationHalophileAmino acidBacterial Typing Techniques030104 developmental biologychemistrySpainWetlandslipids (amino acids peptides and proteins)Spartina maritimaInternational journal of systematic and evolutionary microbiology
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Effect of Salt Concentration and Extremely Halophilic Archaea on the Safety and Quality Characteristics of Traditional Salted Anchovies

2017

Extremely halophilic archaea (EHA) might play an important role in salted fish production. So far, limited information has been available on the effect of EHA and salt concentration on the safety and quality characteristics of salted anchovies. Eight Halobacterium salinarum strains were isolated from different sea salt samples and subjected to phenotypic and genotypic characterization. The strains were then inoculated into fresh salt before addition to anchovies. A total of 18 experimental productions were performed. The inoculated trials showed the lowest counts of undesired microorganisms. In particular, salted anchovies produced with Hbt. salinarum H11 showed the lowest histamine concent…

0301 basic medicineHalobacterium salinarum030106 microbiologySalt (chemistry)Aquatic Science03 medical and health sciencessalted anchoviessalted anchovieBotanyFood scienceSettore BIO/06 - Anatomia Comparata E CitologiaQuality characteristicschemistry.chemical_classificationbiologyExtremely halophilic archaea; Halobacterium salinarum; histamine; salt concentration; salted anchovies; Food Science; Aquatic ScienceSettore AGR/15 - Scienze E Tecnologie Alimentaribiology.organism_classificationhistamineHalophile030104 developmental biologychemistryExtremely halophilic archaeasalt concentrationSalted fishArchaeaFood ScienceSettore AGR/16 - Microbiologia Agraria
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The aminophosphonate glyphosine enhances phycobiliprotein yields from selected cyanobacterial cultures

2017

Among added-value products obtained from cyanobacterial cultures are phycobiliproteins, photosynthetic pigments that have found an increasing number of applications as natural dyes for food, cosmetics, pharmaceuticals, and antioxidants. To obtain sustainable production, we aimed at maximizing phycobilin yield through the increase of either the final biomass or the specific content of these pigments by varying culture parameters, such as chemical composition and pH of the medium or quality and intensity of the light. Here, we report that the addition to the culture medium of millimolar or submillimolar concentrations of the aminophosphonate glyphosine [(N,N-bis(phosphonomethyl)glycine], form…

0106 biological sciences0301 basic medicineFreshwater and halophilic cyanobacteriaBiomassPlant ScienceBiologyPhycobiliproteinAquatic SciencePhotosynthesis01 natural sciencesNO03 medical and health scienceschemistry.chemical_compoundPigmentGlyphosine [(NBiomass yield; Freshwater and halophilic cyanobacteria; Glyphosine [(NN-bis(phosphonomethyl)glycine]; Phycobiliprotein; Product yield; Aquatic Science; Plant SciencePhycobilinFood scienceProduct yieldN-bis(phosphonomethyl)glycine]PhycobiliproteinPlant physiologyBiomass yieldHalophile030104 developmental biologyBiochemistrychemistryAminophosphonatevisual_artvisual_art.visual_art_medium010606 plant biology & botany
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Marinifilum flexuosum sp. nov., a new Bacteroidetes isolated from coastal Mediterranean Sea water and emended description of the genus Marinifilum Na…

2012

Abstract A facultatively anaerobe, moderately halophilic, Gram-negative, filamentous, non motile and unpigmented bacterium, designated M30 T , was isolated from coastal Mediterranean Sea water in Valencia, Spain. Phylogenetic analysis based on 16S rRNA sequences placed this strain in the phylum “ Bacteroidetes ” with Marinifilum fragile JC2469 T as its closest relative with 97% sequence similarity. Average nucleotide identity (ANI) values between both strains were far below the 95% threshold value for species delineation (about 89% using BLAST and about 90% using MUMmer). A comprehensive polyphasic study, including morphological, biochemical, physiological, chemotaxonomic and phylogenetic d…

Strain (chemistry)Phylogenetic treePhylumBacteroidetesMolecular Sequence DataBacteroidetesBiologybiology.organism_classification16S ribosomal RNAApplied Microbiology and BiotechnologyMicrobiologyHalophileMicrobiologyBacterial Typing TechniquesMediterranean seaGenusRNA Ribosomal 16SBotanyMediterranean SeaSeawaterEcology Evolution Behavior and SystematicsPhylogenySystematic and applied microbiology
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Mesonia oceanica sp. Nov., isolated from oceans during the tara oceans expedition, with a preference for mesopelagic waters

2020

10 pages, 4 figures, 3 tables

Mesopelagic zoneMesonia oceanicaMicrobiology03 medical and health sciencesMarine bacteriophageBotany14. Life underwaterGenome sizeEcology Evolution Behavior and Systematics030304 developmental biology0303 health sciencesbiologyStrain (chemistry)030306 microbiologyMarine bacteriaTaxogenomicsGeneral Medicinebiology.organism_classification16S ribosomal RNAFlavobacteriaceaeHalophilebody regionsMesopelagic zoneMesoniaFlavobacteriaceaeBacteria
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Ruegeria denitrificans sp. nov., a marine bacterium in the family Rhodobacteraceae with the potential ability for cyanophycin synthesis.

2018

Strain CECT 5091T, an aerobic, marine, Gram-reaction- and Gram-stain-negative, chemoheterotrophic bacterium was isolated from oysters harvested off the Spanish Mediterranean coast. Analysis of the 16S rRNA gene sequence placed the strain within the genus Ruegeria , in the family Rhodobacteraceae , with 16S rRNA gene similarities of 98.7, 98.7 and 98.4 % to Ruegeria conchae , Ruegeria atlantica and Ruegeria arenilitoris , respectively. Average nucleotide identities (ANI) and in silico DNA–DNA hybridization (DDH) were determined, comparing the genome sequence of CECT 5091T with those of the type strains of 12 species of the genus Ruegeria : the values obtained were always below the thresholds…

0301 basic medicineDNA BacterialCyanophycinRuegeriaMicrobiology03 medical and health scienceschemistry.chemical_compoundMarine bacteriophageBacterial ProteinsRNA Ribosomal 16SMediterranean SeaAnimalsRhodobacteraceaeRhodobacteraceaeMagnesium ionEcology Evolution Behavior and SystematicsPhylogenyBase CompositionbiologyFatty AcidsNucleic Acid HybridizationGeneral MedicineSequence Analysis DNA16S ribosomal RNAbiology.organism_classificationOstreidaeHalophileBacterial Typing Techniques030104 developmental biologyBiochemistrychemistrySpainBacteriaInternational journal of systematic and evolutionary microbiology
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Neptuniibacter caesariensis gen. nov., sp. nov., a novel marine genome-sequenced gammaproteobacterium.

2007

7 pages, 1 figure, 1 table

DNA BacterialOceanospirillaceaeSequence analysisMovementMolecular Sequence DataCarboxylic AcidsZoologyAlteromonadaceaeMicrobiologyDNA RibosomalMicrobiologyMembrane LipidsPhylogeneticsRNA Ribosomal 16SSequence Homology Nucleic AcidMediterranean SeaSeawaterAmino AcidsEcology Evolution Behavior and SystematicsPhylogenyBase CompositionbiologyPhylogenetic treeAlteromonadaceaeFatty AcidsGenes rRNAGeneral MedicineSequence Analysis DNARibosomal RNAbiology.organism_classification16S ribosomal RNAHalophileBacterial Typing TechniquesRNA BacterialOceanospirillaceaeGammaproteobacteriaGenome BacterialInternational journal of systematic and evolutionary microbiology
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Modulation of the growth and metabolic response of cyanobacteria by the multifaceted activity of naringenin

2017

The interactions between the plant-derived bioflavonoid, naringenin, and prokaryotic microalgae representatives (cyanobacteria), were investigated with respect to its influence on the growth and metabolic response of these microorganisms. To achieve reliable results, the growth of cyanobacteria was determined based on measurements of chlorophyll content, morphological changes were assessed through microscopic observations, and the chemical response of cells was determined using liquid and gas chromatography (HPLC; GC-FID). The results show that micromolar levels of naringenin stimulated the growth of cyanobacteria. Increased growth was observed for halophilic strains at naringenin concentra…

ChlorophyllPigments0301 basic medicineCyanobacteriaNaringeninExopolysaccharidesChloroplastsMicroorganismCellGlycobiologyMarine and Aquatic Scienceslcsh:MedicineFresh WaterPlant ScienceBiochemistrychemistry.chemical_compoundElectron MicroscopyNostoclcsh:ScienceLiquid ChromatographyMicroscopyMultidisciplinarybiologyChemistryChromatographic Techniquesfood and beveragesHalophilemedicine.anatomical_structureBiochemistryFlavanonesPhysical SciencesScanning Electron MicroscopyCellular Structures and OrganellesCellular TypesResearch ArticleFreshwater EnvironmentsChromatography GasPlant Cell BiologyMaterials Science030106 microbiologyCyanobacteriaResearch and Analysis MethodsCell wallExcretion03 medical and health sciencesPolysaccharidesPlant CellsmedicineMaterials by AttributeBacteriaOrganic PigmentsEcology and Environmental Scienceslcsh:ROrganismsBiology and Life SciencesAquatic EnvironmentsCell Biologybiology.organism_classificationAnabaenaHigh Performance Liquid Chromatography030104 developmental biologyEarth Scienceslcsh:QBacteriaChromatography LiquidNostoc muscorumPLOS ONE
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