Search results for "Heterogeneity."
showing 10 items of 388 documents
Anthropogenic carbon stocks analysis in sparsely urbanized areas using remote sensing: a case study
2013
Anthropogenic carbon stocks in urbanized areas is a topic of growing importance at both local and regional scale nowadays, but its assessment is subjects to difficulties due to lack of data and spatial heterogeneity of the target. Remote sensing of urban areas has demonstrated its usefulness in assessing phenomena such as soil sealing and surface imperviousness, which are considered to be effective indicators of urbanization. This work presents a preliminary study of mid resolution satellite data capabilities in providing information about anthropogenic carbon stocks over the area of Emilia-Romagna region in Northern Italy. This has been done through a dual approach consisting of: (1) a dir…
Ecological implications of Cousinia Cass. (Asteraceae) persistence through the last two glacial–interglacial cycles in the continental Middle East fo…
2012
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Comparison of different primer sets for use in Automated Ribosomal Intergenic Spacer Analysis of complex bacterial communities.
2004
ABSTRACT ITSF and ITSReub, constituting a new primer set designed for the amplification of the 16S-23S rRNA intergenic transcribed spacers, have been compared with primer sets consisting of 1406F and 23Sr (M. M. Fisher and E. W. Triplett, Appl. Environ. Microbiol. 65:4630-4636, 1999) and S-D-Bact-1522-b-S-20 and L-D-Bact-132-a-A-18 (L. Ranjard et al., Appl. Environ. Microbiol. 67:4479-4487, 2001), previously proposed for automated ribosomal intergenic spacer analysis (ARISA) of complex bacterial communities. An agricultural soil and a polluted soil, maize silage, goat milk, a small marble sample from the façade of the Certosa of Pavia (Pavia, Italy), and brine from a deep hypersaline anoxi…
Shifts in diversity and microscale distribution of the adapted bacterial phenotypes due to Hg(II) spiking in soil.
2003
In a previous experiment [Ranjard et al. (2000) FEMS Microbiol Ecol 31:107–115], the spatial heterogeneity of a mercury impact on soil bacterial community was revealed by an increase of mercury-resistant (HgR) bacterial numbers in the outer fraction and the sand fractions when compared to those in the silt fractions. The objectives of the present study were (i) to investigate whether mercury exposure affects the diversity and the distribution within the various fractions of the HgR populations and (ii) to evaluate the contribution of the HgR populations to the overall community adaptation. A total of 236 strains isolated before (104 isolates) and 30 days (132 isolates) after spiking were ch…
Polyphasic taxonomic characterization of Lactobacillus rossiae isolates from Belgian and Italian sourdoughs reveals intraspecific heterogeneity.
2009
Abstract (GTG) 5 -PCR fingerprinting and pheS sequence analysis of 18 Lactobacillus rossiae isolates, mainly originating from Belgian and Italian artisan sourdoughs, revealed intraspecies grouping as evidenced by the delineation of three and two subgroups, respectively. On the other hand, 16S rRNA and rpoA gene sequence analysis and DNA–DNA hybridizations supported the accommodation of all isolates in a single species. No correlation between genetic and phenotypic heterogeneity was observed. Collectively, these data do not warrant taxonomic division of L. rossiae . On the other hand, the considerable differences in intraspecies sequence variation of L. rossiae isolates displayed by the pheS…
Genetic heterogeneity of porcine enteric caliciviruses identified from diarrhoeic piglets
2008
Enteric caliciviruses (noroviruses and sapoviruses) are responsible for the majority of non-bacterial gastroenteritis in humans of all age groups. Analysis of the polymerase and capsid genes has provided evidence for a huge genetic diversity, but the understanding of their ecology is limited. In this study, we investigated the presence of porcine enteric caliciviruses in the faeces of piglets with diarrhoea. A total of 209 samples from 118 herds were analysed and calicivirus RNA was detected by RT-PCR in 68 sample (32.5%) and in 46 herds (38.9%), alone or in mixed infection with group A and C rotaviruses. Sequence and phylogenetic analysis of the calicivirus-positive samples characterized t…
Santa Rosalia, the icon of biodiversity
2010
This article summarizes the results presented in a series of invited contributions which were submitted to celebrate the fiftieth anniversary of publication of the seminal article ‘‘Homage to Santa Rosalia or why are there so many kinds of animals’’ by G.E. Hutchinson. The authors were asked to explore old and new paradigms of biodiversity in aquatic ecosystems. The contributions by Hutchinson in this field are truly landmarks in the history of modern ecological sciences. The authors of the contributed articles, stimulated by one of the most fruitful concept articles in ecology that has appeared over the last half century, have shown that scientific investigation, although still seeking the…
Genetic structure of Tunisian sheep breeds as inferred from genome-wide SNP markers
2020
Abstract Assessing the status of genetic variability of native sheep breeds could provide important clues for research and policy makers to devise better strategies for the conservation and management of genetic resources. In this study, a genetic investigation of Tunisian sheep breeds using a genome-wide scan of approximately 50,000 SNPs was performed. To reconstruct genetic structure and relationships among four sheep breeds, 40 samples belonging to fat-tailed Barbarine, Queue Fine de l’Ouest, Noire de Thibar and D’Man breeds were genotyped using Illumina Ovine SNP50 BeadChip. Tunisian breeds averaged 96 % polymorphic loci with an expected heterozygosity (He = 0.36). Genetic analysis of r…
Novel Munc13-4 mutations in children and young adult patients with haemophagocytic lymphohistiocytosis
2006
Familial haemophagocytic lymphohistiocytosis (FHL) is a genetically heterogeneous disorder characterised by constitutive defects in cellular cytotoxicity resulting in fever, hepatosplenomegaly and cytopenia, and the outcome is fatal unless treated by chemoimmunotherapy followed by haematopoietic stem‐cell transplantation. Since 1999, mutations in the perforin gene giving rise to this disease have been identified; however, these account only for 40% of cases. Lack of a genetic marker hampers the diagnosis, suitability for transplantation, selection of familial donors, identification of carriers, genetic counselling and prenatal diagnosis. Mutations in the Munc13–4 gene have recently been des…
Habitat preferences of Bonelli's Eagles Aquila fasciata in Sicily
2012
Capsule For breeding, areas dominated by extensive agricultural and rugged Mediterranean landscapes are preferred; maintenance of habitat heterogeneity and extensive agriculture are key for the conservation of this eagle. Aims To model breeding habitat preferences of Bonelli's Eagles Aquila fasciata in Sicily, where the last viable population still remains in Italy, in order to identify the most important habitats for conservation. Methods Pairs were monitored between 1990 and 2010. A case-control design through glms was used at two spatial scales: landscape and home-range. Variables included topographic, climatic, land-use, road and descriptors of habitat heterogeneity. Information-based c…