Search results for "Hybridization"

showing 10 items of 812 documents

Evolution and genetic structure of the great tit (Parus major) complex

2003

The great tit complex is divided into four groups, each containing several subspecies. Even though the groups are known to differ markedly on morphological, vocal and behavioural characters, some hybridization occurs in the regions where they meet. The great tit has often been referred to as an example of a ring species, although this has later been questioned. Here, we have studied the genetic structure and phylogenetic relationships of the subspecies groups to clarify the evolutionary history of the complex using control region sequences of the mitochondrial DNA. The subspecies groups were found to be monophyletic and clearly distinct in mitochondrial haplotypes, and therefore must have h…

Mitochondrial DNAAsiaZoologySubspeciesBiologyDNA MitochondrialGeneral Biochemistry Genetics and Molecular BiologyEvolution MolecularSongbirdsMonophylyPhylogeneticsAnimalsCluster AnalysisPhylogenyDNA PrimersGeneral Environmental SciencemtDNA control regionParusGeographyGeneral Immunology and MicrobiologyPhylogenetic treeGeneral MedicineLocus Control Regionbiology.organism_classificationEuropeEvolutionary biologyHybridization GeneticGeneral Agricultural and Biological SciencesResearch ArticleRing speciesProceedings of the Royal Society of London. Series B: Biological Sciences
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Morphological and genome-wide evidence for natural hybridisation within the genus Stipa (Poaceae)

2020

AbstractHybridisation in the wild between closely related species is a common mechanism of speciation in the plant kingdom and, in particular, in the grass family. Here we explore the potential for natural hybridisation in Stipa (one of the largest genera in Poaceae) between genetically distant species at their distribution edges in Mountains of Central Asia using integrative taxonomy. Our research highlights the applicability of classical morphological and genome reduction approaches in studies on wild plant species. The obtained results revealed a new nothospecies, Stipa × lazkovii, which exhibits intermediate characters to S. krylovii and S. bungeana. A high-density DArTseq assay disclos…

Mitochondrial DNADNA PlantCentral asialcsh:MedicineBiologyPoaceaeDNA MitochondrialGenomeArticleSpecies SpecificityPlant hybridizationGenusPoaceaePlastidlcsh:ScienceTaxonomyMultidisciplinarylcsh:Rbiology.organism_classificationPhylogeneticsEvolutionary biologyNext-generation sequencingAsia CentralGenetic markersHybridization Geneticlcsh:QStipaTaxonomy (biology)Genome PlantGenome-Wide Association StudyScientific Reports
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Mitochondrial inheritance and fermentative : oxidative balance in hybrids between Saccharomyces cerevisiae and Saccharomyces uvarum.

2008

Breeding between Saccharomyces species is a useful tool for obtaining improved wine yeast strains, combining fermentative features of parental species. In this work, 25 artificial Saccharomyces cerevisiae × Saccharomyces uvarum hybrids were constructed by spore conjugation. A multi-locus PCR‐restriction fragment length polymorphism (PCR‐RFLP) analysis, targeting six nuclear gene markers and the ribosomal region including the 5.8S rRNA gene and the two internal transcribed spacers, showed that the hybrid genome is the result of two chromosome sets, one coming from S. cerevisiae and the other from S. uvarum. Mitochondrial DNA (mtDNA) typing showed uniparental inheritance in all hybrids. Furth…

Mitochondrial DNANuclear geneSaccharomyces cerevisiaeUniparental inheritanceBioengineeringSaccharomyces cerevisiaeBiologyApplied Microbiology and BiotechnologyBiochemistryGenomeDNA MitochondrialDNA RibosomalPolymerase Chain ReactionSaccharomyces cerevisiae; Saccharomyces uvarum; yeast hybrid; gene expression; mitochondrial DNAGeneticsMycological Typing TechniquesGeneHexose transportCrosses GeneticGeneticsRibosomal RNAbiology.organism_classificationRNA Ribosomal 5.8SGenes MitochondrialFermentationHybridization GeneticBiotechnologyYeast (Chichester, England)
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Asymmetric allelic introgression across a hybrid zone of the coal tit (Periparus ater) in the central Himalayas*

2021

Abstract In the Himalayas, a number of secondary contact zones have been described for vicariant vertebrate taxa. However, analyses of genetic divergence and admixture are missing for most of these examples. In this study, we provide a population genetic analysis for the coal tit (Periparus ater) hybrid zone in Nepal. Intermediate phenotypes between the distinctive western “spot‐winged tit” (P. a. melanolophus) and Eastern Himalayan coal tits (P. a. aemodius) occur across a narrow range of <100 km in western Nepal. As a peculiarity, another distinctive cinnamon‐bellied form is known from a single population so far. Genetic admixture of western and eastern mitochondrial lineages was restrict…

Mitochondrial DNAPeriparusbiologyEcologybusiness.industryIntrogressionmitochondrial DNAbiology.organism_classificationmicrosatellitesHybrid zoneNepalEvolutionary biologybirdsMicrosatelliteCoalcline analysisAllelebusinesshybridizationEcology Evolution Behavior and SystematicsQH540-549.5Research ArticlesNature and Landscape ConservationResearch ArticleEcology and Evolution
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Segment polarity and DV patterning gene expression reveals segmental organization of theDrosophilabrain

2003

The insect brain is traditionally subdivided into the trito-, deuto- and protocerebrum. However, both the neuromeric status and the course of the borders between these regions are unclear. The Drosophila embryonic brain develops from the procephalic neurogenic region of the ectoderm, which gives rise to a bilaterally symmetrical array of about 100 neuronal precursor cells, called neuroblasts. Based on a detailed description of the spatiotemporal development of the entire population of embryonic brain neuroblasts, we carried out a comprehensive analysis of the expression of segment polarity genes (engrailed, wingless, hedgehog, gooseberry distal,mirror) and DV patterning genes (muscle segmen…

Models Anatomicanimal structuresBiologyNeuroblastGenes ReporterEctodermMorphogenesisAnimalsDrosophila ProteinsCompartment (development)Molecular BiologyIn Situ HybridizationBody PatterningNeuroectodermfungiGenes HomeoboxBrainGene Expression Regulation DevelopmentalAnatomyNeuromereengrailedDrosophila melanogasterSegment polarity geneembryonic structuresHomeoboxNeuroscienceGanglion mother cellDevelopmental BiologyDevelopment
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Metallothionein Gene Family in the Sea Urchin Paracentrotus lividus: Gene Structure, Differential Expression and Phylogenetic Analysis

2017

Metallothioneins (MT) are small and cysteine-rich proteins that bind metal ions such as zinc, copper, cadmium, and nickel. In order to shed some light on MT gene structure and evolution, we cloned seven Paracentrotus lividus MT genes, comparing them to Echinodermata and Chordata genes. Moreover, we performed a phylogenetic analysis of 32 MTs from different classes of echinoderms and 13 MTs from the most ancient chordates, highlighting the relationships between them. Since MTs have multiple roles in the cells, we performed RT-qPCR and in situ hybridization experiments to understand better MT functions in sea urchin embryos. Results showed that the expression of MTs is regulated throughout de…

Models Molecular0301 basic medicineProtein Conformationmetallothionein; multigene families; evolution; metal; echinoderms; embryonic development; gene expressionCatalysiGene OrderMetallothioneinSea urchinPhylogenySpectroscopyPhylogenetic treebiologyEchinodermMetalGene Expression Regulation DevelopmentalComputer Science Applications1707 Computer Vision and Pattern RecognitionExonsGeneral MedicineAnatomyMultigene familiemultigene familiesComputer Science ApplicationsCell biologymedicine.anatomical_structureMetalsMultigene FamilyParacentrotusEchinoderms; Embryonic development; Evolution; Gene expression; Metal; Metallothionein; Multigene families; Catalysis; Molecular Biology; Computer Science Applications1707 Computer Vision and Pattern Recognition; Spectroscopy; Physical and Theoretical Chemistry; Organic Chemistry; Inorganic ChemistryMesenchymeSettore BIO/11 - Biologia MolecolareIn situ hybridizationArticleCatalysisParacentrotus lividusInorganic Chemistry03 medical and health sciencesbiology.animalevolutionmedicineAnimalsGene familyProtein Interaction Domains and MotifsAmino Acid SequencePhysical and Theoretical ChemistryGeneMolecular BiologydevelopmentechinodermsOrganic Chemistrybiology.organism_classificationmetallothioneinAlternative Splicing030104 developmental biologyGene Expression RegulationEmbryonic developmentgene expression
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Activation of EDTA-resistant Gelatinases in Malignant Human Tumors

2006

Abstract Among the many proteases associated with human cancer, seprase or fibroblast activation protein α, a type II transmembrane glycoprotein, has two types of EDTA-resistant protease activities: dipeptidyl peptidase and a 170-kDa gelatinase activity. To test if activation of gelatinases associated with seprase could be involved in malignant tumors, we used a mammalian expression system to generate a soluble recombinant seprase (r-seprase). In the presence of putative EDTA-sensitive activators, r-seprase was converted into 70- to 50-kDa shortened forms of seprase (s-seprase), which exhibited a 7-fold increase in gelatinase activity, whereas levels of dipeptidyl peptidase activity remaine…

Models MolecularCancer ResearchProteasesProtein ConformationDipeptidyl-peptidase activityIn situ hybridizationBiologyDipeptidyl peptidaseArticleCell LineFibroblast activation protein alphaNeoplasmsEndopeptidasesmedicineGelatinaseAnimalsHumansDipeptidyl-Peptidases and Tripeptidyl-PeptidasesEdetic AcidSerine EndopeptidasesMembrane ProteinsHaplorhinimedicine.diseaseRecombinant Proteinsseprase fibroblast activation protein alpha (FAP-α) gelatinase activation malignant tumorEnzyme ActivationOncologyBiochemistryGelatinasesCancer researchImmunohistochemistryAdenocarcinoma
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Vibrio sinaloensis sp. nov., isolated from the spotted rose snapper, Lutjanus guttatus Steindachner, 1869.

2008

Nine bacterial strains were studied by means of rep-PCR, 16S rRNA gene sequence analysis, DNA-DNA hybridization and physiological characterization. Typing analysis by means of rep-PCR showed that all nine strains were highly homogeneous, with similarities above 94 %. The strains were isolated from the same geographical area (Mazatlan, Sinaloa state, Mexico) and the same type of host (cultured rose snapper, Lutjanus guttatus), although from different individuals and organs. Comparison of the almost-complete 16S rRNA gene sequences of five strains showed that they belonged to the genus Vibrio and are closely related to the type strains of Vibrio brasiliensis and Vibrio hepatarius, with simila…

Molecular Sequence DataBiologyMicrobiologyMicrobiologyFish DiseasesSpecies SpecificityVibrionaceaeRNA Ribosomal 16SSequence Homology Nucleic AcidAnimalsTypingMexicoEcology Evolution Behavior and SystematicsVibrioPhylogenetic treeNucleic Acid HybridizationGeneral MedicineRibosomal RNAbiology.organism_classification16S ribosomal RNAVibrioPerciformesPhenotypeVibrio InfectionsTaxonomy (biology)BacteriaInternational journal of systematic and evolutionary microbiology
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Complex evolution of tandem-repetitive DNA in the Chironomus thummi species group.

1997

The subspecies Chironomus thummi thummi and C. t. piger display dramatic differences in the copy number and chromosomal localization of a tandemly repeated DNA family (Cla elements). In order to analyze the evolutionary dynamics of this repeat family, we studied the organization of Cla elements in the related outgroup species C. luridus. We find three different patterns of Cla element organization in C. luridus, showing that Cla elements may be either strictly tandem-repetitive or be an integral part of two higher-order tandem repeats (i.e., Hinf[lur] elements, Sal[lur] elements). All three types of Cla-related repeats are localized in the centromeres of C. luridus chromosomes. This suggest…

Molecular Sequence DataBiologySubspeciesChironomidaeTransposition (music)Evolution Molecularchemistry.chemical_compoundTandem repeatSpecies SpecificityCentromereGeneticsAnimalsCloning MolecularRepeated sequenceMolecular BiologyEcology Evolution Behavior and SystematicsIn Situ HybridizationRepetitive Sequences Nucleic AcidCloningGeneticsintegumentary systemBase Sequencefood and beveragesDNAchemistryNucleic acidlipids (amino acids peptides and proteins)DNAJournal of molecular evolution
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The Striking Case of Tryptophan Provision in the Cedar Aphid Cinara cedri

2008

ABSTRACT Buchnera aphidicola BCc has lost its symbiotic role as the tryptophan supplier to the aphid Cinara cedri . We report the presence of a plasmid in this endosymbiont that contains the trpEG genes. The remaining genes for the pathway ( trpDCBA ) are located on the chromosome of the secondary endosymbiont “ Candidatus Serratia symbiotica.” Thus, we propose that a symbiotic consortium is necessary to provide tryptophan.

Molecular Sequence DataGenetics and Molecular BiologyMicrobiologySerratiaMicrobiologyPlasmidBuchneraSymbiosisAnimalsSymbiosisMolecular BiologyGeneIn Situ HybridizationAphidModels GeneticbiologyfungiTryptophanTryptophanbiochemical phenomena metabolism and nutritionbiology.organism_classificationGenes BacterialAphidsCandidatusbacteriaBuchneraPlasmidsJournal of Bacteriology
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