Search results for "Hydrogen bond"

showing 10 items of 1310 documents

Tridentate C–I⋯O−–N+ halogen bonds

2017

The X-ray structures of the first co-crystals where the three oxygen lone pairs in N-oxides are fully utilized for tridentate C–I⋯O−–N+ halogen bonding with 1,ω-diiodoperfluoroalkanes are reported, studied computationally, and compared with the corresponding silver(I) N-oxide complexes. peerReviewed

kemialliset sidoksethalogeenithalogen bondsChalcogensHydrogen BondsSpin-Spin Coupling
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5-Imino-3,4-diphenyl-1H-pyrrol-2-one

2014

The title compound, C16H12N2O, exists in the crystalline state as the 5-imino-3,4-diphenyl-1H-pyrrol-2-one tautomer. The dihedral angles between the pyrrole and phenyl rings are 35.3 (2) and 55.3 (2)°. In the crystal, inversion dimers linked by pairs of N—H...N hydrogen bonds generate a graph-set motif ofR22(8)viaN—H...N hydrogen bonds.

kristallografiaCrystallographyHydrogen bondGeneral ChemistryDihedral angleCondensed Matter PhysicsBioinformaticsOrganic PapersTautomerCrystalchrystallographychemistry.chemical_compoundCrystallographychemistryQD901-999General Materials Scienceta116Pyrrole
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2,3-Di­phenyl­male­imide 1-methyl­pyrrol­idin-2-one monosolvate

2014

In the title compound, C16H11NO2·C5H9NO, the dihedral angles between the maleimide and phenyl rings are 34.7 (2) and 64.8 (2)°. In the crystal, the 2,3-diphenylmaleimide and 1-methylpyrrolidin-2-one molecules form centrosymmetrical dimersviapairs of strong N—H...O hydrogen bonds and π–π stacking interactions between the two neighboring maleimide rings [centroid–centroid distance = 3.495 (2) Å]. The dimers are further linked by weak C—H...O and C—H...π hydrogen bonds into a three-dimensional framework.

kristallografiaHydrogen bondStackingGeneral ChemistryDihedral angleCondensed Matter PhysicsBioinformaticsOrganic Paperslcsh:ChemistrychrystallographyCrystalCrystallographychemistry.chemical_compoundlcsh:QD1-999chemistryGeneral Materials ScienceImideta116Acta Crystallographica Section E: Structure Reports Online
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Structural analysis of two foldamer-type oligoamides – the effect of hydrogen bonding on solvate formation, crystal structures and molecular conforma…

2012

Author's Final draft The crystal structures and molecular conformations of two foldamer-type oligoamides were analyzed. One polymorphic form and seven solvates were found for N¹,N³-bis(2-benzamidophenyl)benzene-1,3-dicarboxamide (the benzene variant), and two polymorphic forms and six solvates for N²,N⁶-bis(2-benzamidophenyl)pyridine-2,6-dicarboxamide (the pyridine variant). Three crystal structures of the benzene variant and seven structures of the pyridine variant were solved using single crystal X-ray diffraction. The crystal structures showed that the different modes of intramolecular hydrogen bonding strongly affect the conformation and folding of the molecules, which is most evidently…

kristallografiafoldameeriHydrogen bondStereochemistryFoldamerGeneral ChemistryCrystal structurekidetiedeCondensed Matter PhysicsoligoamideFolding (chemistry)chemistry.chemical_compoundCrystallographychemistryoligoamidifoldamerIntramolecular forcePyridineMoleculeGeneral Materials Scienceta116Single crystalCrystEngComm
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Intermolecular hydrogen bonding in isostructural pincer complexes [OH-(t-BuPOCOPt-Bu)MCl] (M = Pd and Pt)

2019

In the crystal structure of the isostructural title compounds, namely {2,6-bis[(di-tert-butylphosphanyl)oxy]-4-hydroxyphenyl}chloridopalladium(II), [Pd(C22H39O3P2)Cl], 1, and {2,6-bis[(di-tert-butylphosphanyl)oxy]-4-hydroxyphenyl}chloridoplatinum(II), [Pt(C22H39O3P2)Cl], 2, the metal centres are coordinated in a distorted square-planar fashion by the POCOP pincer fragment and the chloride ligand. Both complexes form strong hydrogen-bonded chain structures through an interaction of the OH group in the 4-position of the aromatic POCOP backbone with the halide ligand. © 2019.

lcsh:Chemistrycrystal structurelcsh:QD1-999pincer complexesplatinum540palladiumhydrogen bondingActa Crystallographica Section E: Crystallographic Communications
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New Insights into the complexation of lead(II) by 1,4,7,10-tetrakis(carbamoylmethyl)-1,4,7,10-tetraazacyclododecane (DOTAM): structural, thermodynami…

2007

The lead(II) coordination properties of the tetrapodal ligand DOTAM [1,4,7,10-tetrakis(carbamoylmethyl)-1,4,7,10-tetraaza-cyclododecane] have been investigated both in the solid state and in solution in order to ascertain the stereoactivity of the lone pair and to rationalize the structural effects of a cyclen-based scaffold on the metal uptake kinetics. The crystal structure of the free base shows that the pendant acetamide groups are not equivalent: two are folded over the macrocycle and maintained by an intramolecular hydrogen bond involving an amide hydrogen atom and a neighboring tertiary amine of the cyclen ring, while the other two are extended and point away from the macrocyclic cav…

leadCoordination sphereTertiary amine010405 organic chemistryChemistryHydrogen bondLigandStereochemistry[ CHIM.COOR ] Chemical Sciences/Coordination chemistry010402 general chemistry01 natural sciences0104 chemical sciences[CHIM.THEO]Chemical Sciences/Theoretical and/or physical chemistryInorganic Chemistrychemistry.chemical_compoundCrystallographyCyclenAmideIntramolecular force[ CHIM.THEO ] Chemical Sciences/Theoretical and/or physical chemistry[CHIM.COOR]Chemical Sciences/Coordination chemistryLone pairDOTAMComputingMilieux_MISCELLANEOUS
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Synthesis of isomorphous cobalt and nickel thiocyanate coordination compounds: Effect of metals on compound properties

2019

The reaction of 2-methylpiperazine with the thiocyanate ligand and two transition metals leads to the production of two new isomorphous [ML2SCN4] where L is the 2-methylpiperazine and [M =Co (1), and Ni (2)], presenting an octahedral configuration. These compounds were characterized by single crystal X-ray crystallography, TG-DTA analysis, as well as infrared and UV-Vis spectroscopy and TG-DTA. The magnetic and antibacterial properties were also determined. Through the link with N-H···S hydrogen bonds, a global 3D network was established. The studied compounds show the metal center’s impact leading to different properties. Indeed, the first compound shows high spin orbit coupling, whereas t…

magneettiset ominaisuudetchemistry.chemical_element010402 general chemistry01 natural sciencesCoordination complexInorganic ChemistryMetalchemistry.chemical_compoundTransition metalMaterials Chemistrycobalt coordination compoundkobolttiPhysical and Theoretical Chemistryantimikrobiset yhdisteetchemistry.chemical_classificationThiocyanate010405 organic chemistryHydrogen bondLigandantibacterial activitieskompleksiyhdisteetnickel coordination compound0104 chemical sciencesCrystallographychemistryvisual_artvisual_art.visual_art_mediummagnetic propertiesisomorphous structurenikkeliCobaltSingle crystalPolyhedron
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Self-Complementary Dimers of Oxalamide-Functionalized Resorcinarene Tetrabenzoxazines

2018

Self‐complementarity is a useful concept in supramolecular chemistry, molecular biology and polymeric systems. Two resorcinarene tetrabenzoxazines decorated with four oxalamide groups were synthesized and characterized. The oxalamide groups possessed self‐complementary hydrogen bonding sites between the carbonyls and amide groups. The self‐complementary nature of the oxalamide groups resulted in self‐included dimeric assemblies. The hydrogen bonding interactions within the tetrabenzoxazines gave rise to the formation of dimers, which were confirmed by single‐crystal X‐ray diffractions analysis and supported by NMR spectroscopy and mass spectrometry. The self‐included dimers were connected b…

massaspektrometriaspectroscopyNoncovalent interactionsobligaatiotspektroskopiaSupramolecular chemistrycarbonylsdimers ; noncovalent interactions ; resorcinarenes ; supramolecular chemistry ; X-ray diffraction010402 general chemistry01 natural sciencesBiochemistryoligomerchemistry.chemical_compounddimersAmidePolymer chemistryNon-covalent interactionsresorcinarenesta116mass spectrometrychemistry.chemical_classificationbondsta114010405 organic chemistryHydrogen bondOrganic ChemistryIntermolecular forceGeneral ChemistryNuclear magnetic resonance spectroscopyPolymerResorcinareneX-ray diffraction0104 chemical sciencesoligomeeriamideschemistryvetyamidithydrogenself-complementaritySupramolecular chemistrykarbonyylitChemistry: An Asian Journal
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6-Amino-2-(pivaloylamino)pyridinium benzoate

2013

In the crystal structure of the title salt, C10H16N3O+·C7H5O2−, the cations and anions are linked to each other via N—H⋯O hydrogen bonds, forming infinite chains running along [010]. The crystal structure also features C—H⋯O and π–π stacking inter­actions, which assemble the chains into supra­molecular layers parallel to (100). The π–π stacking inter­actions are observed between the pyridine rings of inversion-related cations with a centroid–centroid distance of 3.867 (2) Å. Financial support from the National Science Centre in Kraków (grant No. NCN204 356840) is gratefully acknowledged. Academy Professor Kari Rissanen (Academy of Finland grant Nos. 122350, 140718, 265328 and 263256) and th…

mean (C–C) = 0.003 A˚StackingSalt (chemistry)Crystal structureT = 123 KBioinformaticsOrganic Paperschemistry.chemical_compoundwR factor = 0.141Pyridinesingle-crystal X-ray study6-Amino-2-(pivaloylamino)pyridinium benzoateGeneral Materials Science6-amino-2-(pivaloyyli)pyridiniumbentsoaattita116chemistry.chemical_classificationyksikideröntgendiffraktiotutkimusCrystallographyHydrogen bond6-amino-2-(pivaloyyli)pyridiinibentsoehappo6-amino-2-(pivaloylamino)pyridineR factor = 0.066General ChemistryCondensed Matter PhysicsCrystallographydata-to-parameter ratio = 16.9chemistryQD901-999PyridiniumActa Crystallographica Section E-Structure Reports Online
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Non-covalent interactions of N-phenyl-1,5-dimethyl-1H-imidazole-4-carboxamide 3-oxide derivatives—a case of intramolecular N-oxide hydrogen bonds

2017

The crystal structures of new N-phenyl-1,5-dimethyl-1H-imidazole-4-carboxamide 3-oxide derivatives are reported. The results of X-ray diffraction showed the existence of intramolecular hydrogen bonding between carboxamide nitrogen donors and N-oxide oxygen acceptors. The use of Quantum Theory of Atoms in Molecules allowed its classification as a strong interaction, with energy about 10 kcal/mol, and of intermediate character between closed shell and shared bonds. Comparison of experimental data and quantum theoretical calculations indicated that a substituent attached to the phenyl ring in the para position influences the strength and geometry of the title hydrogen bonding. Stronger π-elect…

medicine.drug_classLow-barrier hydrogen bondintramolecular hydrogen bondSubstituentCarboxamideN-oxide group010402 general chemistry01 natural scienceschemistry.chemical_compoundComputational chemistrymedicineNon-covalent interactionsHirshfeld surface analysisPhysical and Theoretical Chemistrychemistry.chemical_classification010405 organic chemistryHydrogen bondIntermolecular forceAtoms in moleculesCondensed Matter Physicshydrogen bonding0104 chemical sciencesCrystallographychemistryQTAIMIntramolecular forcesubstituent effectStructural Chemistry
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